Diffusion tamaas (petsc) History

tamaas/src
petsca2cbdc79e6cb0e27e70a876…

Apr 10 2018

Created Kato solver files
a2cbdc79e6cb
·phamba on Apr 10 2018, 10:22.

Apr 9 2018

fixed surface influence
883f28a6b00a
·frerot on Apr 9 2018, 19:47.
fixed bug in StaticMatrix
4c13f6a751f0
·frerot on Apr 9 2018, 18:37.
testing surface model
1c6889d64cd5
·frerot on Apr 9 2018, 18:37.

Apr 6 2018

fixed bug with implicit definition of copy assignment operator in static types
fc58bd090767
·frerot on Apr 6 2018, 17:34.

Mar 29 2018

fixed infinite loop in fftransform
b84e276da654
·frerot on Mar 29 2018, 13:04.
deactivated thrust policies
9e8577ecc57f
·frerot on Mar 29 2018, 10:46.
fixed computation of frequencies
4b57e0d206e1
·frerot on Mar 29 2018, 10:45.

Mar 28 2018

getting rid of nvcc warning
d661e192cc5b
·frerot on Mar 28 2018, 15:42.
loop overload with execution policy
460e4d07a92b
·frerot on Mar 28 2018, 13:50.

Mar 27 2018

wrote Kelvin integrator
7a886bd63adb
·frerot on Mar 27 2018, 16:46.
wrote Kelvin coefficients
77d78e14930f
·frerot on Mar 27 2018, 15:26.

Mar 26 2018

modifications to ve engines
f4774c2ac6f2
·frerot on Mar 26 2018, 14:18.

Mar 25 2018

changed NULL to nullptr
a81206e0f0ef
·frerot on Mar 25 2018, 16:52.
factorized some code in solvers
f3fccdcfc1d3
·frerot on Mar 25 2018, 16:49.
made tamaas info available in python
b9d7bd23002c
·frerot on Mar 25 2018, 16:48.
using unique pointers where possible
871bdca33c95
·frerot on Mar 25 2018, 13:38.

Mar 24 2018

correct handling of hermitian grid by pybind
2e3b93674788
·frerot on Mar 24 2018, 10:37.

Mar 23 2018

fixed build bug of link of _tamaas.so happening too early
97cbaba6111f
·frerot on Mar 23 2018, 18:14.
fixed repeat solve bug + corrupt fft plans bug [temp fix]
ba6c1de7c812
·frerot on Mar 23 2018, 17:37.

Mar 22 2018

fixed segmentation fault when adding adhesion functionals
fb9337f5e5e1
·frerot on Mar 22 2018, 10:06.

Mar 21 2018

rewrote GridView for contiguous data + test of wavevectors generation
b1d76079b6e0
·frerot on Mar 21 2018, 16:15.

Mar 19 2018

Merge branch 'master' of ssh://c4science.ch/source/tamaas
62630d8b3b33
·frerot on Mar 19 2018, 18:05.
changed Model pointer for construction of VEEngines
42b925e8ef4c
·frerot on Mar 19 2018, 17:44.

Mar 16 2018

added kelvin class
0158bc7fc227
·frerot on Mar 16 2018, 19:50.
layed out structure for Mindlin integral operators
f03ad955dcac
·frerot on Mar 16 2018, 17:58.
some cleanup
e722836a68b2
·frerot on Mar 16 2018, 16:06.
made FFTPlanManager singleton a std::unique_ptr
6e637d24b807
·frerot on Mar 16 2018, 15:46.
some c++11 conversion
e5a735859e62
·frerot on Mar 16 2018, 15:35.
removed 3D ffts (so cuda may compile)
ed49f86e5be2
·frerot on Mar 16 2018, 15:32.

Mar 15 2018

made surface model type compile on cuda
2cb504f747bd
·frerot on Mar 15 2018, 14:00.

Mar 13 2018

forgot one CUDA_LAMBDA
030d7204596f
·tag: pybind
·frerot on Mar 13 2018, 08:59.

Mar 12 2018

fixed warning for cuda
0cd483eb65aa
·frerot on Mar 12 2018, 17:09.

Mar 8 2018

fixed memory errors + restored compatibility
cd034e49e5c8
·frerot on Mar 8 2018, 18:58.

Mar 7 2018

potential fix to a conversion problem with GridHermitian
af94be1267cc
·frerot on Mar 7 2018, 16:53.
wrapped most of modern Tamaas
5ad7e31c1c5e
·frerot on Mar 7 2018, 16:22.
added type casters for pybind11
4ef018c79b67
·frerot on Mar 7 2018, 14:09.

Mar 5 2018

moved to shared_ptr for meta functional list elements
f394931cca31
·frerot on Mar 5 2018, 13:06.
fixed PKR algo for adhesion
0733646b1821
·frerot on Mar 5 2018, 11:22.

Mar 2 2018

running adhesion example, but problem with final state of solution
99e8b8cff2f4
·frerot on Mar 2 2018, 18:10.

Mar 1 2018

porting adhesion functionals to new code
3b4e6d404c40
·frerot on Mar 1 2018, 18:39.

Dec 13 2017

fixed leak on model in test_rough_surface
b5577c4d3177
·frerot on Dec 13 2017, 14:47.

Nov 29 2017

suppressed some compile errors with nvcc
05cb094fac6a
·frerot on Nov 29 2017, 10:59.

Nov 23 2017

simplification of influence functions code
73dd359ecbfa
·frerot on Nov 23 2017, 12:00.

Nov 17 2017

recursive apply functor implementation
e88936f5d0fd
·frerot on Nov 17 2017, 10:35.

Nov 15 2017

clearer moments code
d01e5c973ef6
·frerot on Nov 15 2017, 17:08.
added computation of moments (TODO implement correct test)
e5efef4d3c7c
·frerot on Nov 15 2017, 15:29.
minor cleanups
c80cfa59257f
·frerot on Nov 15 2017, 09:40.

Nov 14 2017

correct handling of gradient conditions in PKR
67e961750934
·frerot on Nov 14 2017, 17:36.

Nov 10 2017

updated c++ example
f52d1730a909
·frerot on Nov 10 2017, 16:53.

Nov 9 2017

clang-format
84f3f89f4f46
·frerot on Nov 9 2017, 14:32.
cleanup + compatibility with clang
bbd990f626b4
·frerot on Nov 9 2017, 14:14.
changed iterator tag to allow thrust algos on device
6fd8e54c11a4
·frerot on Nov 9 2017, 12:59.
saner code (const-correctness + defaults)
9f1e91288a10
·frerot on Nov 9 2017, 11:58.
removed warning
a1637da8edd6
·frerot on Nov 9 2017, 11:56.
clarifying side effects in functionals
b6fe91b593c4
·frerot on Nov 9 2017, 11:09.

Nov 7 2017

added cudaDeviceSynchronize in fft interface
81dd5f04e1bc
·frerot on Nov 7 2017, 16:32.

Nov 5 2017

using instead of typdefs in iterators
e67ad1441169
·frerot on Nov 5 2017, 17:38.
passed clang-format on whole repository
3927fa639a53
·frerot on Nov 5 2017, 11:23.

Nov 3 2017

more readable array
d069f5437129
·frerot on Nov 3 2017, 17:57.
protecting allocator include
e634f0066037
·frerot on Nov 3 2017, 17:33.
adding fftw_malloc for SIMD aligned data allocation
30d402099764
·frerot on Nov 3 2017, 17:30.
device for ApplyConstructor + cudaSync
7043e94a544a
·frerot on Nov 3 2017, 17:00.
consistent apply_functor copies
88e8bc9847bf
·frerot on Nov 3 2017, 15:43.
fixing rvalue functor bug by making copy
4df748b7012f
·frerot on Nov 3 2017, 12:33.

Nov 2 2017

Merge branch 'gpu' into thrust
c6b27f90032a
·frerot on Nov 2 2017, 10:52.
added test for model and influence coeffs
dd65fd640204
·frerot on Nov 2 2017, 10:51.
added c++ tests for fft interface
f676e684c984
·frerot on Nov 2 2017, 10:30.

Nov 1 2017

rewrote loops with thrust
a0869ea06429
·frerot on Nov 1 2017, 18:14.
small test of thrust capacities
209b1173d70d
·frerot on Nov 1 2017, 15:07.
passing for_each loops tests
b3c9bf19b545
·frerot on Nov 1 2017, 11:59.

Oct 31 2017

make everything compile with -G
8ef9e8b95c5b
·frerot on Oct 31 2017, 18:09.
simplified for testing
b366bc3c68d8
·frerot on Oct 31 2017, 16:58.
removing unused code
2e578b066372
·frerot on Oct 31 2017, 13:37.
getting the cuda loops to compile (return of the lambda)
2be5a950ade8
·frerot on Oct 31 2017, 13:25.
getting the cuda loops to compile
0d1eb492274b
·frerot on Oct 31 2017, 11:45.

Oct 30 2017

trying to adapt code to cuda
c952c8e72bb7
·frerot on Oct 30 2017, 16:13.
removed Loop singleton
d75a65d09d21
·frerot on Oct 30 2017, 09:19.

Oct 28 2017

added some documentation to classes
01bc15346e7f
·frerot on Oct 28 2017, 18:34.
added enumeration helper in Loop
b59fa1b6aab3
·frerot on Oct 28 2017, 18:33.

Oct 27 2017

implemented matrices for strided loops
f31c9478eeb0
·frerot on Oct 27 2017, 16:57.
added strided loops
f76320c57280
·frerot on Oct 27 2017, 16:42.

Oct 26 2017

added Statistics class
0ca44f94ddd0
·frerot on Oct 26 2017, 16:36.
added @file tag for documentation
a79f64962579
·frerot on Oct 26 2017, 11:41.
rewrote polonsky with lambda-loops
a757e2311dc9
·frerot on Oct 26 2017, 11:13.

Oct 25 2017

changed vectorial operators
68d26a7bbdf2
·frerot on Oct 25 2017, 16:56.
c++14 pulls + passing tests
095106192bbb
·frerot on Oct 25 2017, 16:08.
empty line
966c6339c964
·frerot on Oct 25 2017, 12:19.
added loop abstractions
326e0378133b
·frerot on Oct 25 2017, 11:55.

Oct 12 2017

instanciating fftransfromcufft for dims 1 and 3
de2d37bf9bc9
·frerot on Oct 12 2017, 12:58.
modified fftransformcufft for multi-component ffts
221ad73b17f3
·frerot on Oct 12 2017, 12:48.
more modular SConstruct
43e776cc945c
·frerot on Oct 12 2017, 12:15.
update copyright year in model subdir
7c7dc19567c8
·frerot on Oct 12 2017, 09:34.

Oct 11 2017

made tamaas compile with nvcc and custom tool
864dce59b0cf
·frerot on Oct 11 2017, 18:19.

Sep 27 2017

minor change in Array interface
0f8352bd1e95
·frerot on Sep 27 2017, 15:00.

Sep 20 2017

added C++ tests with Criterion framework
2a56e9fac13e
·frerot on Sep 20 2017, 15:39.
added const to binary predicates of iterator
6ba14bbcbd89
·frerot on Sep 20 2017, 12:43.

Sep 11 2017

removed const_cast in fftransformfftw
c848bdbde110
·frerot on Sep 11 2017, 17:00.

Jul 31 2017

reintroduced old bems for compatibility, but they should be marked as deprecated
3c976f436924
·frerot on Jul 31 2017, 10:24.
new PolonskyKeerRey is working in pressure and gap
393b17a3c8bb
·frerot on Jul 31 2017, 09:49.

tamaas/srcpetsca2cbdc79e6cb0e27e70a876…

Apr 10 2018

Apr 9 2018

Apr 6 2018

Mar 29 2018

Mar 28 2018

Mar 27 2018

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Jul 31 2017

tamaas/src
petsca2cbdc79e6cb0e27e70a876…