Change Details

= DESCRIPTION = This ActionBar enables the registration of SIM/STORM images (Or any kind of imaging modality where identical bead images can be acquired. Please see the documentation in the publication https://www.ncbi.nlm.nih.gov/pubmed/28924661 = INSTALLATION = == Dependencies == This plugin depends from multiple packages - ThunderSTORM (If you want to use the shortcuts provided, optional) https://zitmen.github.io/thunderstorm/ - ActionBar (From the IBMP-CNRS Update Site) http://imagejdocu.tudor.lu/doku.php?id=plugin:utilities:action_bar:start - The PTBIOP Update site == Getting the tool == The file you need to download is [[https://c4science.ch/source/ijab-sim-storm-tools/browse/master/BIOP_SIM_STORM_Tools.ijm | BIOP_SIM_STORM_Tools.ijm]] from our GIT Repository The documentation is also downloadable [[https://c4science.ch/source/ijab-sim-storm-tools/browse/master/SIM%20STORM%20Registration%20Protocol.pdf | As a PDF File]] == Copy this file to your Fiji installation == under `plugins > ActionBar` eg. `C:\Fiji\plugins\ActionBar\BIOP_SIM_STORM_Tools.ijm` After restarting Fiji, you will find it under Plugins > ActionBar.

= DESCRIPTION = This ActionBar enables the registration of SIM/STORM images (Or any kind of imaging modality where identical bead images can be acquired. Please see the documentation in the publication https://www.ncbi.nlm.nih.gov/pubmed/28924661 = INSTALLATION = == Dependencies == This plugin depends from multiple packages - ThunderSTORM (If you want to use the shortcuts provided, optional) https://zitmen.github.io/thunderstorm/ - ActionBar (From the IBMP-CNRS Update Site) http://imagejdocu.tudor.lu/doku.php?id=plugin:utilities:action_bar:start - The PTBIOP Update site == Getting the tool == The file and documentation are downloadable from [[https://doi.org/10.5281/zenodo.1405365 | From Zenodo]] There is also a [[https://doi.org/10.5281/zenodo.1036658 | Demio Dataset]] ==Unzip the file into your Fiji Plugins folder == it should then be inder `Plugins > ActionBar > SIM-STORM` after you restart Fiji.

= DESCRIPTION = This ActionBar enables the registration of SIM/STORM images (Or any kind of imaging modality where identical bead images can be acquired. Please see the documentation in the publication https://www.ncbi.nlm.nih.gov/pubmed/28924661 = INSTALLATION = == Dependencies == This plugin depends from multiple packages - ThunderSTORM (If you want to use the shortcuts provided, optional) https://zitmen.github.io/thunderstorm/ - ActionBar (From the IBMP-CNRS Update Site) http://imagejdocu.tudor.lu/doku.php?id=plugin:utilities:action_bar:start - The PTBIOP Update site == Getting the tool == The file you need to download is [[https://c4science.ch/source/ijab-sim-storm-tools/browse/master/BIOP_SIM_STORM_Tools.ijm | BIOP_SIM_STORM_Tools.ijm]] from our GIT Repositoryand documentation are downloadable from [[https://doi.org/10.5281/zenodo.1405365 | From Zenodo]] The documentation is also downloadable [[https://c4science.ch/source/ijab-sim-storm-tools/browse/master/SIM%20STORM%20Registration%20Protocol.pdf | As a PDF Filere is also a [[https://doi.org/10.5281/zenodo.1036658 | Demio Dataset]] == Copy this==Unzip the file into your Fiji installation ==Plugins folder == under `plugins > ActionBar` eg. `C:\Fiji\pit should then be inder `Plugins\ > ActionBar\BIOP_SIM_ > SIM-STORM_Tools.ijm`` After restarting Fiji,after you will find it under Plugins > ActionBarrestart Fiji.