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c516ecb4392e
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Authored by adler on Jan 26 2017, 12:04.

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new repository

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adler

Jan 26 2017, 12:04

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adler

Jan 26 2017, 12:06

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adler committed R2010:c516ecb4392e: new repository (authored by adler).Jan 26 2017, 12:04

Changes (84)

		Path
A		TODO
A	(dir)	Test_files/
A		Test_files/config_clustering_cd_hit_test.txt
A		Test_files/config_clustering_dbc_test.txt
A		Test_files/read_me_test.txt
A	(dir)	Test_files/test_input/
A		Test_files/test_input/R2_dbc_test.clusters
A		Test_files/test_input/R2_trim.contigs.good_all.fasta
A	(dir)	Test_files/test_input/References/
A	(dir)	Test_files/test_input/References/home/
A	(dir)	Test_files/test_input/References/home/aline/
A	(dir)	Test_files/test_input/References/home/aline/spe_repository_aa/
A	(dir)	Test_files/test_input/References/home/aline/spe_repository_aa/project/
A	(dir)	Test_files/test_input/References/home/aline/spe_repository_aa/project/class_diagram/
A	(dir)	Test_files/test_input/References/home/aline/spe_repository_aa/project/class_diagram/Test_files/
A	(dir)	Test_files/test_input/References/home/aline/spe_repository_aa/project/class_diagram/Test_files/test_input/
A	(dir)	Test_files/test_input/References/home/aline/spe_repository_aa/project/class_diagram/Test_files/test_input/References/
A		Test_files/test_input/References/home/aline/spe_repository_aa/project/class_diagram/Test_files/test_input/References/midas_test.nhr
A		Test_files/test_input/References/home/aline/spe_repository_aa/project/class_diagram/Test_files/test_input/References/midas_test.nin
A		Test_files/test_input/References/home/aline/spe_repository_aa/project/class_diagram/Test_files/test_input/References/midas_test.nsq
A		Test_files/test_input/References/midas_test.fasta
A		Test_files/test_input/References/midas_test.tax
A		Test_files/test_input/cluster_heads_blast_results_test
A		Test_files/test_input/cluster_heads_test.fasta
A		Test_files/test_input/initial_seq_file.fasta
A		Test_files/test_input/test_cdhit.clust.clstr
A		project.classes
A		project.dot
A		project.pdf
A		readme.txt
A	(dir)	skeleton/
A		skeleton/blast_file_reader.py
A		skeleton/blast_file_reader.pyc
A		skeleton/cd_hit_cluster_file_reader.py
A		skeleton/cd_hit_cluster_file_reader.pyc
A		skeleton/cluster.py
A		skeleton/cluster.pyc
A		skeleton/cluster_collection.py
A		skeleton/cluster_collection.pyc
A		skeleton/cluster_file_reader.py
A		skeleton/cluster_file_reader.pyc
A		skeleton/clustering_process_fct.py
A		skeleton/clustering_process_fct.pyc
A		skeleton/config_file_reader.py
A		skeleton/config_file_reader.pyc
A		skeleton/database_reader.py
A		skeleton/dbc_cluster_file_reader.py
A		skeleton/dbc_cluster_file_reader.pyc
A		skeleton/dna_sequence.py
A		skeleton/dotdict.py
A		skeleton/dotdict.pyc
A		skeleton/event.py
A		skeleton/experiment.py
A		skeleton/fasta_reader.py
A		skeleton/fasta_reader.pyc
A		skeleton/filter.py
A		skeleton/filter_builder.py
A		skeleton/main.py
A		skeleton/metadata_reader.py
A		skeleton/metadata_reader.pyc
A		skeleton/operator.py
A		skeleton/performances.py
A		skeleton/protein_sequence.py
A		skeleton/reactor.py
A		skeleton/reactor_operation.py
A		skeleton/reader.py
A		skeleton/reader.pyc
A		skeleton/rna_sequence.py
A		skeleton/sample.py
A		skeleton/sequence.py
A		skeleton/sequence.pyc
A		skeleton/sequence_collection.py
A		skeleton/sequence_collection.pyc
A		skeleton/sludge_caracteristics.py
A		skeleton/tax_file_reader.py
A		skeleton/tax_file_reader.pyc
A		skeleton/taxonomic_database_reader.py
A		skeleton/taxonomic_database_reader.pyc
A		skeleton/taxonomy.py
A		skeleton/taxonomy.pyc
A		skeleton/taxonomy_collection.py
A		skeleton/taxonomy_collection.pyc
A		skeleton/test_fct.py
A		skeleton/test_fct.pyc