added getModel and getPointNeuron functions. removed deprecated scripts.
1c9c63d4ba6a
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Authored by tlemaire on Jun 6 2019, 18:29.

Description

added getModel and getPointNeuron functions. removed deprecated scripts. replaced plotComp and plotBatch functions by ComparativePlot and SchemePlot classes inheriting from same mother class.

Details

Committed

tlemaire

Jun 6 2019, 18:29

Pushed

tlemaire

Jun 6 2019, 18:29

Parents

R4670:01bf73a48e1a: minodr edits

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tlemaire committed R4670:1c9c63d4ba6a: added getModel and getPointNeuron functions. removed deprecated scripts. (authored by tlemaire).Jun 6 2019, 18:29

Changes (59)

				Path
	M			PySONIC.sublime-project
	M			PySONIC/core/__init__.py
	M			PySONIC/core/bls.py
	M			PySONIC/core/model.py
	M			PySONIC/core/nbls.py
	M			PySONIC/core/pneuron.py
	M			PySONIC/neurons/__init__.py
	M			PySONIC/parsers.py
	M			PySONIC/plt/QSS.py
	M			PySONIC/plt/__init__.py
	M			PySONIC/plt/actmap.py
	D			PySONIC/plt/batch.py
	D			PySONIC/plt/comp.py
	M			PySONIC/plt/pltutils.py
	M			PySONIC/plt/spikeutils.py
	A			PySONIC/plt/timeseries.py
	M			PySONIC/utils.py
	D			deprecated
	D			deprecated/GPR
	D			deprecated/GPR/test_GPR1D.py
	D			deprecated/GPR/test_GPR2D.py
	D			deprecated/GPR/test_GPR2D_multiout.py
	D			deprecated/GPR/test_bayesian_optimization.py
	D			deprecated/Taylor expansions
	D			deprecated/Taylor expansions/plot_rates_derivatives.py
	D			deprecated/Taylor expansions/test_alpham_Taylor.py
	D			deprecated/Taylor expansions/test_alpham_eff_Taylor.py
	D			deprecated/curve fitting
	D			deprecated/curve fitting/fit_Vmeff.py
	D			deprecated/curve fitting/fit_alphaheff.py
	D			deprecated/curve fitting/fit_alphameff.py
	D			deprecated/curve fitting/fit_alphaneff.py
	D			deprecated/curve fitting/fit_betaheff.py
	D			deprecated/curve fitting/fit_betameff.py
	D			deprecated/curve fitting/fit_betaneff.py
	D			deprecated/curve fitting/fit_eff_coeffs.py
	D			deprecated/kriging
	D			deprecated/kriging/lhs.py
	D			deprecated/kriging/test_pykrige_Vmeff.py
	D			deprecated/kriging/test_pykriging1D.py
	D			deprecated/kriging/test_pykriging2D.py
	M			paper figures/deprecated/figQSS.py
	M			paper figures/fig2.py
	M			paper figures/fig4.py
	M			paper figures/fig5.py
	M			paper figures/fig7.py
	M			paper figures/fig8.py
	M			paper figures/fig9.py
	M			paper figures/utils.py
	M			scripts/generate_mod_file.py
	M			scripts/plot_effective_variables.py
	M			scripts/plot_gating_kinetics.py
	M			scripts/plot_rheobase_amps.py
	V			scripts/{plot_timeseries.py ← plot_tprofiles.py}
	V			scripts/{plot_tprofiles.py → plot_timeseries.py}
	M			scripts/run_astim.py
	M			scripts/run_estim.py
	M			scripts/run_lookups.py
	M			scripts/run_mech.py