Diffusion PySONIC (old) 2a334b211bff

major changes to the package (PointNeuron, SonicNeuron, ...)
2a334b211bff
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Authored by tlemaire on Sep 23 2018, 14:28.

Description

major changes to the package (PointNeuron, SonicNeuron, ...)

Details

Committed

tlemaire

Sep 23 2018, 14:28

Pushed

tlemaire

Sep 23 2018, 14:31

Parents

R4670:193d4adc2a5f: included 4D lookup for RS neuron.

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tlemaire committed R4670:2a334b211bff: major changes to the package (PointNeuron, SonicNeuron, ...) (authored by tlemaire).Sep 23 2018, 14:28

Changes (58)

		Path
A		ASTIM.py
A		ESTIM.py
A		MECH.py
M		PySONIC/__init__.py
A		PySONIC/batches.py
V		PySONIC/{ → core}/bls.py
M		PySONIC/constants.py
A	(dir)	PySONIC/core/
V		PySONIC/{core ← solvers}/__init__.py
V		PySONIC/{core ← }/bls.py
A		PySONIC/core/pneuron.py
V		PySONIC/{core/sonic.py ← solvers/SolverUS.py}
D		PySONIC/lookups/RS_lookups_a32.0nm_mpi.pkl
P		PySONIC/lookups/SONIC_FS.pkl Copied from PySONIC/lookups/SONIC_RS.pkl
P		PySONIC/lookups/SONIC_RE.pkl Copied from PySONIC/lookups/SONIC_RS.pkl
M		PySONIC/neurons/__init__.py
D		PySONIC/neurons/base.py
M		PySONIC/neurons/cortical.py
M		PySONIC/neurons/leech.py
M		PySONIC/neurons/thalamic.py
M		PySONIC/plt/pltutils.py
A		PySONIC/postpro.py
D		PySONIC/solvers
D		PySONIC/solvers/SolverElec.py
V		PySONIC/{solvers/SolverUS.py → core/sonic.py}
V		PySONIC/{solvers → core}/__init__.py
D		PySONIC/solvers/simutils.py
M		PySONIC/utils.py
M		README.md
A		lookups.py
M		plot/plot_ESTIM_anim.py
M		plot/plot_Ih_kinetics.py
D		postpro
D		postpro/postpro_latency.py
D		postpro/postpro_rmse_charge.py
D		postpro/postpro_sensitivity_diameter.py
D		postpro/postpro_sensitivity_embedding.py
D		postpro/postpro_sensitivity_stim_embedded.py
D		postpro/postpro_sensitivity_stim_exposed.py
D		postpro/postpro_spikerate.py
D		postpro/postpro_spikes.py
D		postpro/postpro_threshold_duration.py
D		postpro/postpro_threshold_frequency.py
M		setup.py
D		sim
D		sim/batch_ASTIM.py
D		sim/batch_ESTIM.py
D		sim/batch_MECH.py
D		sim/lookups_ASTIM.py
D		sim/run_ASTIM.py
D		sim/run_ESTIM.py
D		sim/run_MECH.py
D		sim/titration_batch_ASTIM.py
D		sim/titration_batch_ESTIM.py
M		tests/graphs.py
M		tests/test_basic.py
M		tests/test_intermolecular_pressure.py
M		tests/test_values.py