Diffusion scATAC-seq 782b030be48e

save
782b030be48e
Actions

Authored by rgroux on Aug 29 2019, 10:28.

Description

save

Details

Committed

rgroux

Aug 29 2019, 10:28

Pushed

rgroux

Aug 29 2019, 10:33

Parents

R8820:ee90f0419b6f: save

Branches

Unknown

Tags

Unknown

[cURL/7] (http://10.0.1.35:80/api/diffusion.refsquery) <CURLE_COULDNT_CONNECT> The cURL library raised an error while making a request. You may be able to find more information about this error (error code: 7) on the cURL site: http://curl.haxx.se/libcurl/c/libcurl-errors.html#CURLECOULDNTCONNECT

Event Timeline

rgroux committed R8820:782b030be48e: save (authored by rgroux).Aug 29 2019, 10:28

Changes (62)

		Path
M		scripts/10xgenomics_PBMC_5k_motifs_classification_1/classification_ctcf_motif.R
M		scripts/10xgenomics_PBMC_5k_motifs_classification_1/classification_ebf1_motif.R
M		scripts/10xgenomics_PBMC_5k_motifs_classification_1/classification_myc_motif.R
M		scripts/10xgenomics_PBMC_5k_motifs_classification_1/classification_sp1_motif.R
M		scripts/10xgenomics_PBMC_5k_motifs_classification_2/classification_ctcf_motif.R
M		scripts/10xgenomics_PBMC_5k_motifs_classification_2/classification_ebf1_motif.R
M		scripts/10xgenomics_PBMC_5k_motifs_classification_2/classification_myc_motif.R
M		scripts/10xgenomics_PBMC_5k_motifs_classification_2/classification_sp1_motif.R
A	(dir)	scripts/10xgenomics_PBMC_5k_peaks_classification_0/
P		scripts/10xgenomics_PBMC_5k_peaks_classification_0/analysis_test_sampled.R Copied from scripts/10xgenomics_PBMC_5k_peaks_classification_3/analysis_test_sampled.R
P		scripts/10xgenomics_PBMC_5k_peaks_classification_0/classification_peaks_sampled.sh Copied from scripts/10xgenomics_PBMC_5k_peaks_classification_1/classification_peaks_sampled.sh
A		scripts/10xgenomics_PBMC_5k_peaks_classification_0/motif_tree.R
A		scripts/10xgenomics_PBMC_5k_peaks_classification_0/run_all.sh
P		scripts/10xgenomics_PBMC_5k_peaks_classification_1/classification_peaks_sampled.sh Copied to scripts/10xgenomics_PBMC_5k_peaks_classification_0/classification_peaks_sampled.sh
A		scripts/10xgenomics_PBMC_5k_peaks_classification_1/motif_tree.R
A		scripts/10xgenomics_PBMC_5k_peaks_classification_1/run_all.sh
M		scripts/10xgenomics_PBMC_5k_peaks_classification_2/classification_peaks_sampled.sh
A		scripts/10xgenomics_PBMC_5k_peaks_classification_2/motif_tree.R
A		scripts/10xgenomics_PBMC_5k_peaks_classification_2/run_all.sh
M		scripts/10xgenomics_PBMC_5k_peaks_classification_3/classification_peaks_sampled.sh
A		scripts/10xgenomics_PBMC_5k_peaks_classification_3/motif_tree.R
A		scripts/10xgenomics_PBMC_5k_peaks_classification_3/run_all.sh
M		scripts/10xgenomics_PBMC_5k_peaks_classification_4/classification_peaks_sampled.sh
V		scripts/{10xgenomics_PBMC_5k_peaks_classification_4/motif_tree.R ← test_dendrogram.R}
A		scripts/10xgenomics_PBMC_5k_peaks_classification_4/run_all.sh
M		scripts/10xgenomics_PBMC_5k_peaks_classification_5/classification_peaks_sampled.sh
A		scripts/10xgenomics_PBMC_5k_peaks_classification_5/motif_tree.R
A		scripts/10xgenomics_PBMC_5k_peaks_classification_5/run_all.sh
M		scripts/10xgenomics_PBMC_5k_peaks_classification_6/analysis_test_sampled.R
M		scripts/10xgenomics_PBMC_5k_peaks_classification_6/classification_peaks_sampled.sh
A		scripts/10xgenomics_PBMC_5k_peaks_classification_6/run_all.sh
A		scripts/10xgenomics_PBMC_5k_peaks_classification_7/run_all.sh
V		scripts/{test_dendrogram.R → 10xgenomics_PBMC_5k_peaks_classification_4/motif_tree.R}
P		src/Applications/ClassCorrelationMatrixCreatorApplication.cpp Copied from src/Applications/ReadModelExtenderApplication.cpp
P		src/Applications/ClassCorrelationMatrixCreatorApplication.hpp Copied from src/Applications/CorrelationMatrixCreatorApplication.hpp
P		src/Applications/CorrelationMatrixCreatorApplication.hpp Copied to src/Applications/ClassCorrelationMatrixCreatorApplication.hpp
M		src/Applications/EMJointApplication.cpp
M		src/Applications/ProbToModelApplication.cpp
M		src/Applications/ProbToModelApplication.hpp
P		src/Applications/ReadModelExtenderApplication.cpp Copied to src/Applications/ClassCorrelationMatrixCreatorApplication.cpp
M		src/Applications/ReadModelExtenderApplication.hpp
M		src/Applications/SequenceModelExtenderApplication.cpp
M		src/Applications/SequenceModelExtenderApplication.hpp
M		src/CMakeLists.txt
P		src/Clustering/ConsensusSequenceLayer.cpp Copied from src/GenomicTools/CellMatrixCreator.cpp
A		src/Clustering/ConsensusSequenceLayer.hpp
M		src/Clustering/DataLayer.cpp
M		src/Clustering/DataLayer.hpp
M		src/Clustering/EMJoint.cpp
M		src/Clustering/EMRead.cpp
M		src/Clustering/EMRead.hpp
M		src/Clustering/EMSequence.cpp
M		src/Clustering/EMSequence.hpp
M		src/Clustering/ReadLayer.cpp
M		src/Clustering/ReadLayer.hpp
M		src/Clustering/ReadModelComputer.cpp
M		src/Clustering/ReadModelComputer.hpp
M		src/Clustering/SequenceLayer.cpp
M		src/Clustering/SequenceLayer.hpp
M		src/Clustering/SequenceModelComputer.cpp
M		src/Clustering/SequenceModelComputer.hpp
M		src/main_test.cpp

save782b030be48eActions

Description

Details

Event Timeline

Changes (62)

R8820:782b030be48e

scripts/10xgenomics_PBMC_5k_motifs_classification_1/classification_ctcf_motif.R

scripts/10xgenomics_PBMC_5k_motifs_classification_1/classification_ebf1_motif.R

scripts/10xgenomics_PBMC_5k_motifs_classification_1/classification_myc_motif.R

scripts/10xgenomics_PBMC_5k_motifs_classification_1/classification_sp1_motif.R

scripts/10xgenomics_PBMC_5k_motifs_classification_2/classification_ctcf_motif.R

scripts/10xgenomics_PBMC_5k_motifs_classification_2/classification_ebf1_motif.R

scripts/10xgenomics_PBMC_5k_motifs_classification_2/classification_myc_motif.R

scripts/10xgenomics_PBMC_5k_motifs_classification_2/classification_sp1_motif.R

scripts/10xgenomics_PBMC_5k_peaks_classification_0/analysis_test_sampled.R

scripts/10xgenomics_PBMC_5k_peaks_classification_0/classification_peaks_sampled.sh

scripts/10xgenomics_PBMC_5k_peaks_classification_0/motif_tree.R

scripts/10xgenomics_PBMC_5k_peaks_classification_0/run_all.sh

scripts/10xgenomics_PBMC_5k_peaks_classification_1/classification_peaks_sampled.sh

scripts/10xgenomics_PBMC_5k_peaks_classification_1/motif_tree.R

scripts/10xgenomics_PBMC_5k_peaks_classification_1/run_all.sh

scripts/10xgenomics_PBMC_5k_peaks_classification_2/classification_peaks_sampled.sh

scripts/10xgenomics_PBMC_5k_peaks_classification_2/motif_tree.R

scripts/10xgenomics_PBMC_5k_peaks_classification_2/run_all.sh

scripts/10xgenomics_PBMC_5k_peaks_classification_3/classification_peaks_sampled.sh

scripts/10xgenomics_PBMC_5k_peaks_classification_3/motif_tree.R

scripts/10xgenomics_PBMC_5k_peaks_classification_3/run_all.sh

scripts/10xgenomics_PBMC_5k_peaks_classification_4/classification_peaks_sampled.sh

scripts/10xgenomics_PBMC_5k_peaks_classification_4/motif_tree.R

scripts/10xgenomics_PBMC_5k_peaks_classification_4/run_all.sh

scripts/10xgenomics_PBMC_5k_peaks_classification_5/classification_peaks_sampled.sh

scripts/10xgenomics_PBMC_5k_peaks_classification_5/motif_tree.R

scripts/10xgenomics_PBMC_5k_peaks_classification_5/run_all.sh

scripts/10xgenomics_PBMC_5k_peaks_classification_6/analysis_test_sampled.R

scripts/10xgenomics_PBMC_5k_peaks_classification_6/classification_peaks_sampled.sh

scripts/10xgenomics_PBMC_5k_peaks_classification_6/run_all.sh

scripts/10xgenomics_PBMC_5k_peaks_classification_7/run_all.sh

scripts/test_dendrogram.R

src/Applications/ClassCorrelationMatrixCreatorApplication.cpp

src/Applications/ClassCorrelationMatrixCreatorApplication.hpp

src/Applications/CorrelationMatrixCreatorApplication.hpp

src/Applications/EMJointApplication.cpp

src/Applications/ProbToModelApplication.cpp

src/Applications/ProbToModelApplication.hpp

src/Applications/ReadModelExtenderApplication.cpp

src/Applications/ReadModelExtenderApplication.hpp

src/Applications/SequenceModelExtenderApplication.cpp

src/Applications/SequenceModelExtenderApplication.hpp

src/CMakeLists.txt

src/Clustering/ConsensusSequenceLayer.cpp

src/Clustering/ConsensusSequenceLayer.hpp

src/Clustering/DataLayer.cpp

src/Clustering/DataLayer.hpp

src/Clustering/EMJoint.cpp

src/Clustering/EMRead.cpp

src/Clustering/EMRead.hpp

src/Clustering/EMSequence.cpp

src/Clustering/EMSequence.hpp

src/Clustering/ReadLayer.cpp

src/Clustering/ReadLayer.hpp

src/Clustering/ReadModelComputer.cpp

src/Clustering/ReadModelComputer.hpp

src/Clustering/SequenceLayer.cpp

src/Clustering/SequenceLayer.hpp

src/Clustering/SequenceModelComputer.cpp

src/Clustering/SequenceModelComputer.hpp

src/main_test.cpp

save
782b030be48e
Actions