Added necessary code for EMSequenceApplication and…
f2b641ecc1c6
Actions

Authored by rgroux on Sep 26 2019, 18:44.

Description

Added necessary code for EMSequenceApplication and EMConsensusSequenceApplication to initialise the partitioning with the most significantly over- represented kmers in the data.

Details

Committed

rgroux

Sep 26 2019, 18:45

Pushed

rgroux

Sep 27 2019, 09:16

Parents

R8820:b3279a0472da: Added code to compute kmer enrichment

Branches

Unknown

Tags

Unknown

Event Timeline

rgroux committed R8820:f2b641ecc1c6: Added necessary code for EMSequenceApplication and… (authored by rgroux).Sep 26 2019, 18:45

Changes (13)

				Path
	M			src/Applications/EMConsensusSequenceApplication.cpp
	M			src/Applications/EMConsensusSequenceApplication.hpp
	M			src/Applications/EMSequenceApplication.cpp
	M			src/Applications/EMSequenceApplication.hpp
	M			src/Clustering/ConsensusSequenceLayer.cpp
	M			src/Clustering/ConsensusSequenceLayer.hpp
	M			src/Clustering/Data3DLayer.cpp
	M			src/Clustering/Data3DLayer.hpp
	M			src/Clustering/EMConsensusSequence.cpp
	M			src/Clustering/EMConsensusSequence.hpp
	M			src/Statistics/KmersStatistics.cpp
	M			src/Statistics/KmersStatistics.hpp
	M			src/main_test.cpp