R4670/scriptsmaster
R4670/scripts
master
History Graph
History Graph
Commit | Author | Details | Committed | |||
---|---|---|---|---|---|---|
957db9d021d6 | tlemaire | added getLookups2Dfs method to interpolate lookups at given membrane coverage. | Jan 23 2019 | |||
80aa94a42257 | tlemaire | added script to compute quick lookups for a span of partial sonophore coverage… | Jan 23 2019 | |||
65c1d8649331 | tlemaire | implemented Frankenhaeuser-Huxley membrane mechanism (validated against data… | Jan 9 2019 | |||
8a4719662fd9 | tlemaire | corrected error in Vm post-processing in runSONIC. added plotV option to… | Dec 27 2018 | |||
42f56ab271e3 | tlemaire | modified plotActivationMap to plot amplitude thresholds computed from titration… | Dec 14 2018 | |||
0fcd53a68ce7 | tlemaire | added pltvars for STN neuron. added plotFRprofile function along with paper… | Dec 9 2018 | |||
9eca746695d1 | tlemaire | STN model validated for E-STIM by reproduction of key features (spontaneous… | Dec 3 2018 | |||
0ebd7ae3b932 | tlemaire | replaced 'L' by 'Leak' in neurons nomenclature. implemented STN neuron with… | Nov 30 2018 | |||
850b05b61c5e | tlemaire | added plotFRspectrum function to actmap module. updated fig7 script, and added… | Nov 29 2018 | |||
fa4c643a5a4b | tlemaire | added spanDC argument to run_astim. removed rheobase amp preconditioning in… | Nov 27 2018 | |||
9f827c942524 | tlemaire | added recording of computation times during lookups creation. | Nov 25 2018 | |||
2f63e4926c36 | tlemaire | improved plotRheobaseAmps function. improved arguments parsing in command line… | Nov 22 2018 | |||
8573c726b480 | tlemaire | modified getLookups2D to project along any dimensions pair in (a, f, A). | Nov 20 2018 | |||
d17615ffb4e6 | tlemaire | improved plotPhasePlane function. implemented isWithin function for loose bound… | Oct 28 2018 | |||
35b8bf12ec49 | tlemaire | plotPhaseDiagram method validated on CW stimuli | Oct 25 2018 | |||
d2b627754312 | tlemaire | implemented figtitle method for direct labeling from metadata. implemented… | Oct 25 2018 | |||
ed0d192b377b | tlemaire | added scripts to generate paper figures automatically. | Oct 2 2018 | |||
73851d6ac128 | tlemaire | updated package documentation | Sep 28 2018 | |||
0927fba5ad55 | tlemaire | removed print statements in run_astim | Sep 27 2018 | |||
81ffd1c605f6 | tlemaire | added LTS and TC lookups. corrected errors in run_astim and run_estim arguments… | Sep 27 2018 | |||
f5f327799ad4 | tlemaire | attempt to fix multiprocessing lookups creation. | Sep 27 2018 | |||
4a67049acd76 | tlemaire | added actmap to plt module, with command line script. | Sep 26 2018 | |||
7bd042cd39f7 | tlemaire | corrected error on lookups dict save. | Sep 26 2018 | |||
0412541be120 | tlemaire | fixed call to plotBatch in run scripts | Sep 25 2018 | |||
a35c13583071 | tlemaire | moved plotComp and plotBatch functions to separate files. created unique plot… | Sep 25 2018 | |||
610dc8472dcf | tlemaire | cleaned up utils module. removed log templates (now generated on the fly with… | Sep 25 2018 | |||
954e545fa6ac | tlemaire | turned intermolecular pressure test script into notebook. removed Input error… | Sep 24 2018 | |||
1951d49ccd25 | tlemaire | moved lookups into neurons folder | Sep 24 2018 | |||
4c4f11074ce9 | tlemaire | cleaned up plot_batch and plot_comp scripts | Sep 24 2018 | |||
4d53b2a42b5e | tlemaire | moved relevant plot scripts to scripts folder. Turned analysis scripts into… | Sep 24 2018 |
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