Diffusion akantu (bugfixes/installation-instructions) History

rAKA/src/synchronizer
bugfixes/installation…a09df51cd665420ce88aa86…

Jan 25 2018

Hardening the code while searching a bug in the parallel version
b2c8fec2b705
·richart on Jan 25 2018, 00:12.

Jan 23 2018

Bug in request handling
6f5652013fda
·richart on Jan 23 2018, 00:01.

Dec 18 2017

Adaptation to be able to compile with gcc 5
6af81b9fd766
·richart on Dec 18 2017, 15:59.

Dec 14 2017

Modified model initilalization
79286ef9af64
·richart on Dec 14 2017, 03:14.

Dec 3 2017

Tidying the code with more clang-tidy
20647fbaefa9
·• arichart on Dec 3 2017, 01:14.

Nov 15 2017

Merge branch 'features/dofs-separation-rewrote' of ssh://c4science.
09e14d695f0b
·frerot on Nov 15 2017, 15:03.
Merge branch 'features/dofs-separation-rewrote' of ssh://c4science.
38321971a389
·frerot on Nov 15 2017, 15:03.
Missing file in the previous commit
591c2a4610e0
·richart on Nov 15 2017, 14:59.
Removed the constness of the Communicator to be able to register event handlers
e673c37968c6
·richart on Nov 15 2017, 14:58.

Nov 14 2017

Correcting some tests
c1c269f95a41
·richart on Nov 14 2017, 20:03.

Nov 10 2017

Adding missing functions in dummy communicator
8c906f6cde22
·richart / lozano on Nov 10 2017, 14:09.

Nov 8 2017

clang-tidy auto-fix second pass for using and auto + performance
98405b386e09
·richart on Nov 8 2017, 18:57.
clang-tidy first pass of auto-fixes
3cb848d814e7
·richart on Nov 8 2017, 02:27.

Nov 7 2017

Integrating parallel cohesive element in master
403f60eeed8a
·richart on Nov 7 2017, 13:56.
Made Element a trivial type + change for gcc5
ddd46197b831
·richart on Nov 7 2017, 13:56.
Refactoring communicator
133a6062c3b5
·richart on Nov 7 2017, 13:56.

Oct 13 2017

Moving parallel cohesive element in the main tree + moving cohesive materials
3fd12b2d3e64
·richart on Oct 13 2017, 17:41.

Sep 19 2017

Corrected non-local manager + made cleanup safer
24e0e7f9b3d3
·richart on Sep 19 2017, 01:33.

Aug 13 2017

Changes getSize to size for compatibility with STL containers
a2a185177344
·richart on Aug 13 2017, 19:05.
Bug fixes + modernization
90231efc4b73
·richart on Aug 13 2017, 01:53.

Aug 11 2017

adding arange similar to numpy.arange
fd0f6180866f
·richart on Aug 11 2017, 02:19.

Aug 9 2017

Dynamic update of mesh + priority list for events
9ffaecefb71a
·richart on Aug 9 2017, 21:04.
Cleaning the mesh insterface + modernization
9d78ebf87276
·richart on Aug 9 2017, 20:54.

Jul 6 2017

Changed initialization of elementtypemaparray
67e65283226f
·richart on Jul 6 2017, 13:31.
Non local refactoring + bug fix in the communications of the weight functions
341103fd512e
·richart on Jul 6 2017, 13:31.

Jun 19 2017

Changing namespace definition
f3288de80211
·richart on Jun 19 2017, 14:16.

Jun 2 2017

Forced c++14 as a standard
298222cbaef9
·richart on Jun 2 2017, 16:58.

Jun 1 2017

Registering the communications
43bae6278ea4
·richart on Jun 1 2017, 13:46.

May 19 2017

Still tracking a bug
848b551583d4
·richart on May 19 2017, 16:34.

May 11 2017

Correcting data distribution test
ca5d409e4ee8
·richart on May 11 2017, 01:16.
Another round of debugging
ca61d1994699
·richart on May 11 2017, 00:50.

Apr 1 2017

Test model solver explicit works in parallel
a59691ac4bb7
·richart on Apr 1 2017, 16:06.
Bug fix in element_synchronizer rewrite
a62caba660ec
·richart on Apr 1 2017, 03:21.

Jan 24 2017

Passing communicators to const StaticCommunicator
0035fcd74950
·richart on Jan 24 2017, 11:40.

Jan 18 2017

Adding pre-assembled terms for coupling matrices + detecting changes in…
0db649cf6d67
·richart on Jan 18 2017, 10:54.

Dec 14 2016

Build profile per types on demand and access to equations numbers needed to…
0f78f3ff18c0
·• arichart on Dec 14 2016, 02:35.

Dec 7 2016

starting to modify the tests for the new API, + bug fixes on autos ans adding…
06e82afebd3a
·richart on Dec 7 2016, 13:55.

Dec 2 2016

Merge branch 'master' into features/dofs-separation-rewrote
1b4820c1db0b
·richart on Dec 2 2016, 17:38.
Rewrote synchronizer interface (need testing)
cafceb59140e
·richart on Dec 2 2016, 17:27.

Aug 6 2016

modifs related to the new test of parallel cohesive element insertion
6897e0f0db58
·fabarras on Aug 6 2016, 14:05.

Apr 25 2016

Merge branch 'master' into dofs-separation-rewrote
e817679d7df6
·richart on Apr 25 2016, 21:17.

Apr 20 2016

Corrected the handling of MPI tags
fcf61d36c7c4
·richart on Apr 20 2016, 20:32.

Apr 13 2016

Added tests and made them work for a model in static linear, dynmic implicit
54d48968a1b6
·richart on Apr 13 2016, 14:21.

Mar 17 2016

Correction due to ediff n in some files...
202c6ec62b8b
·richart on Mar 17 2016, 09:17.
Merge branch 'master' of gitolite-richart:akantu into dofs-separation-rewrote
171d1862ded1
·richart on Mar 17 2016, 00:39.

Mar 16 2016

Change of interface of the communicator
b1e240aae004
·richart on Mar 16 2016, 23:50.

Mar 2 2016

solved memory leaks in static_communicator_mpi and…
8f855bf3fefe
·corrado on Mar 2 2016, 12:04.

Feb 23 2016

modified the test to check the coordinates of the facets barycentre in…
aade5ff089a9
·corrado on Feb 23 2016, 19:02.

Feb 2 2016

Merge branch 'master' into dofs-separation-rewrote
6cd48b3f4371
·richart on Feb 2 2016, 19:38.
Merge branch 'release'
3c4776df5aa0
·richart on Feb 2 2016, 10:54.
minor bugfix in mpi termination
d2ccad3bd2e5
·richart on Feb 2 2016, 10:53.

Feb 1 2016

conflicts resolved
b266e36a8204
·Aurelia Cuba Ramos on Feb 1 2016, 09:21.
modifications to use dummy_communicator for RVEs in FE2 simulations
3be907b09878
·Aurelia Cuba Ramos on Feb 1 2016, 08:57.

Jan 31 2016

give unique memory ids to all the elment type maps, needed for FE2
13dd560ae534
·Aurelia Cuba Ramos on Jan 31 2016, 21:39.

Jan 22 2016

updating headers
8b77901c9c9f
·richart on Jan 22 2016, 16:19.
Removing warnings in -pedantic
c66c6897a714
·richart on Jan 22 2016, 15:08.

Jan 21 2016

reformatting+ removing warnings in -pedantic only some -Wvla left
123b4134e86b
·richart on Jan 21 2016, 01:42.
Removing warning with -Wall -Werror + reformating the fils went through
a1b3497b1275
·LSMS Tester / richart on Jan 21 2016, 00:10.

Jan 19 2016

Bug fixes: memory leaks and finalization
569aca0ad4eb
·richart on Jan 19 2016, 23:05.

Jan 15 2016

Updating the headers for the release 2.3
7dd9648d4655
·LSMS Tester / richart on Jan 15 2016, 17:03.

Jan 13 2016

Correction of MPI_Init to be able to use mpi4py
a1ff9a28c2f8
·richart on Jan 13 2016, 15:53.
Revert "fixed mpi problem with akantu"
c937ce36b65b
·richart on Jan 13 2016, 10:47.
Revert "distinction between clear() used before re-initialize() and finalize()…
91ed8461338d
·richart on Jan 13 2016, 10:46.

Jan 7 2016

distinction between clear() used before re-initialize() and finalize() methods
31baa449f8f1
·fabarras on Jan 7 2016, 16:51.
fixed mpi problem with akantu
1d7e2d3c30c0
·anciaux on Jan 7 2016, 13:43.

Jan 6 2016

Freeing pointer to static member and setting their value to NULL in order to…
5df5f93568d9
·fabarras on Jan 6 2016, 09:34.

Dec 11 2015

Modifications for boost
6fffeec69af2
·richart on Dec 11 2015, 17:49.

Dec 10 2015

OpenMPI seems to not define the max tag
44bf128800e2
·richart on Dec 10 2015, 14:46.
conflit not correctly corrected
4ddead2f89f4
·richart on Dec 10 2015, 11:57.
Merge branch 'master' of lsmssrv1.epfl.ch:akantu
2be8a88b8197
·richart on Dec 10 2015, 10:25.
extending to full support of the MPI reduce operations
3970dec2a337
·richart on Dec 10 2015, 10:25.

Dec 8 2015

pour pouvoir puller puis pusher
f9c5e0db88e7
·Valentine on Dec 8 2015, 17:58.
Merge branch 'master' of lsmssrv1.epfl.ch:akantu
34055c2b6f26
·Valentine on Dec 8 2015, 17:56.
comments for synchronizer for doxygens doc (ticket 109)
98ea3fa4eff0
·Valentine on Dec 8 2015, 17:53.
fixing some more compilation troubles
b4f38a7e8cc1
·anciaux on Dec 8 2015, 13:17.
merging
2fbe060c93b9
·anciaux on Dec 8 2015, 12:58.
compilation with clang ok
273337d4079f
·anciaux on Dec 8 2015, 12:50.

Dec 7 2015

Adding a limitation in the tags from messages
df002cebf0b8
·richart on Dec 7 2015, 13:34.

Nov 19 2015

Bug fixes + little improvements
5462986a7ed5
·richart on Nov 19 2015, 14:41.

Oct 21 2015

modifications to make non-local compatible with IGFEM
4e871c6da7fe
·Aurelia Cuba Ramos on Oct 21 2015, 10:08.

Oct 15 2015

resolved linking problem when compiling without non-local
6f67b4f45472
·Aurelia Cuba Ramos on Oct 15 2015, 18:02.
Non-local development completed in parallel, neighborhood for iterative damage…
54e599859086
·Aurelia Cuba Ramos on Oct 15 2015, 16:16.

Oct 8 2015

Merge branch 'master' of lsmssrv1.epfl.ch:akantu
2d08200f3ffd
·Aurelia Cuba Ramos on Oct 8 2015, 17:54.
modifications to make non-local averaging work in parallel: unique tag
b05e145d997e
·Aurelia Cuba Ramos on Oct 8 2015, 17:54.

Oct 7 2015

Moving some more code for the solver implementations
1f6d3d2a449f
·richart on Oct 7 2015, 00:17.

Oct 2 2015

Creation of a class to update the global connectivity in parallel, important…
733b401f9a72
·Marco Vocialta on Oct 2 2015, 19:23.

Oct 1 2015

Change of events in the mesh sphere intersector and new function to substitute…
f6a3b9d67f7f
·Marco Vocialta on Oct 1 2015, 11:20.

Sep 28 2015

Adding an id to the mesh intersectors and adding onElementsChanged to…
d84828ca54c5
·Marco Vocialta on Sep 28 2015, 18:04.

Aug 4 2015

Modification to make akantu compile with long int (64bit idx) Still has to…
4bee089d6542
·richart on Aug 4 2015, 23:24.

Jun 18 2015

Merge branch 'master' of lsmssrv1.epfl.ch:akantu
82705d8f23c3
·Aurelia Cuba Ramos on Jun 18 2015, 11:53.
set IDs
79c0eea6f9de
·Aurelia Cuba Ramos on Jun 18 2015, 11:24.

May 4 2015

bugs fixed in the management of mumps errors and warnings
49ea74fd0a70
·corrado on May 4 2015, 16:11.

Mar 16 2015

minor correction to avoid potential future bug
d669b69fcf21
·richart on Mar 16 2015, 10:28.

Mar 9 2015

Bug fix in grid synchronizer, send posted never received
d50034961564
·richart on Mar 9 2015, 18:02.

Feb 27 2015

bug fix in non local
5de79ae701d5
·richart on Feb 27 2015, 15:50.

Feb 26 2015

bug fix in material non local
72afa32339fa
·Aurelia Cuba Ramos on Feb 26 2015, 19:31.
Fixes in order to make cohesive elements compatible with the new assignMaterial…
89581d947977
·Marco Vocialta on Feb 26 2015, 12:24.

Feb 25 2015

change from element_index_by_material to material_index +…
bf218b3a7743
·richart on Feb 25 2015, 21:45.

Dec 9 2014

modifications in akantu to use PETSc
65095fda9af0
·Aurelia Cuba Ramos on Dec 9 2014, 21:26.

Nov 4 2014

accessors added in dof synchronizer, modfied petsc matrix to be notified when…
345fed2d5661
·Aurelia Cuba Ramos on Nov 4 2014, 18:56.