Diffusion akantu (features/30-implementing-a-checkpoint-restart-mechanism) History

History
features/30-implementin…c6875ddd87e349599f63d63…

Feb 20 2021

Added a second example for the Python structural mechanics part.
c6875ddd87e3
·Philip Mueller on Feb 20 2021, 13:30.
Continuued to change the Python test for the structural mechanics part.
7fc265ed04a3
·Philip Mueller on Feb 20 2021, 13:30.
Fixed a typo in the CMake for generating the tests for the structural mechanics…
efeb5b494206
·Philip Mueller on Feb 20 2021, 13:30.
Updated the python interface example.
3c12d7cf2bf8
·Philip Mueller on Feb 20 2021, 13:29.

Feb 19 2021

Corrected the Python interface of the structural mechanic wrapper.
82a7780312a9
·Philip Mueller on Feb 19 2021, 13:04.
Added the `addConnectivityType()` function to the Python mesh interface.
61e663e7ef4e
·Philip Mueller on Feb 19 2021, 13:03.
This commit fixes several bugs in the the implementation of the Python…
01bcb20c4be1
·Philip Mueller on Feb 19 2021, 13:03.

Feb 9 2021

Fixed a bug in the import statement of the structural mechanics Python…
ada7f82006b3
·Philip Mueller, HS on Feb 9 2021, 09:27.
restored hermite shapes
0af64787b61a
·richart on Feb 9 2021, 00:42.
Refactored python tests
1abc4f3bbe07
·richart on Feb 9 2021, 00:41.
Adding MeshAccessor to python and adding posibility to resize meshes
4d0f031e57cc
·richart on Feb 9 2021, 00:41.

Feb 8 2021

Bug fix in the python interface of structural model
37859443bada
·richart on Feb 8 2021, 21:18.
Initializing properly the element_material
2acbdaaf8cd2
·richart on Feb 8 2021, 20:58.
Linting the python interface
cfa5e94d461a
·richart on Feb 8 2021, 20:58.
Rewriting the example as a python code, importing the proper code
7964cc764648
·richart on Feb 8 2021, 20:57.

Feb 5 2021

This commit fixes an error in the Python interface of the model.
3b3f8dd7ea14
·Philip Mueller on Feb 5 2021, 09:04.
Added a first try of the test of the Python interface for the structural…
b33952e29d04
·Philip Mueller on Feb 5 2021, 07:14.
This commit fixes an error, at least I think that, in the Python interface of…
774ecbc86b45
·Philip Mueller on Feb 5 2021, 07:14.
Included the python wrapper of the structural mechanics part into CMake.
94e219d28e47
·Philip Mueller on Feb 5 2021, 07:14.
Finalized the work on the Python interface for the structural mechanics part.
30c9fd7592cc
·Philip Mueller on Feb 5 2021, 07:14.
Added functions to better interact with the material torage of the…
b50bd31e0897
·Philip Mueller on Feb 5 2021, 07:14.
Modified the `addMaterial()` function of the `StructuralMechanicsModel`.
79f4c1da6356
·Philip Mueller on Feb 5 2021, 07:14.
Started with the extension of the Python interface such that it also includes…
bb4f972b0fd6
·Philip Mueller, HS / Philip Mueller on Feb 5 2021, 07:14.
Bug fix of dynamics structural elements
07f0ddac6c74
·richart on Feb 5 2021, 00:22.

Feb 1 2021

correcting shapes in _bernouilli beams
3fc67b1ce150
·richart on Feb 1 2021, 09:24.
A bit more cleaning
7a4e9ed7d487
·richart on Feb 1 2021, 09:20.

Jan 28 2021

Assembling structural elements mass matrix in FEEngine
444e834089dc
·richart on Jan 28 2021, 23:46.
Compilation error on ubuntu corrected
46d4f944ae1c
·richart on Jan 28 2021, 19:03.
Correcting output in example dynamic
e6edb9f9650a
·richart on Jan 28 2021, 13:20.
Reactivating mass matrix computation for structural elements
cd7dcdf942c9
·richart on Jan 28 2021, 13:00.

Jan 27 2021

Reactivating boundary forces code for structural elements
1ee60b339902
·richart on Jan 27 2021, 00:36.

Jan 22 2021

Adding a bit more messages when detection goes wrong
ddfca904d0c2
·richart on Jan 22 2021, 17:30.
Making the "detection" of lib Math more generic
26ee6d2d296f
·richart on Jan 22 2021, 13:14.
Impoving the detection of MUMPS (OpenMP, Math and LAPACK)
cfb7f41f350d
·Philip Mueller / richart on Jan 22 2021, 13:09.

Jan 20 2021

Merge branch 'master' into 'master'
3c8cc7d31cc9
·richart on Jan 20 2021, 18:16.
Correct the akantu config to be correct in spack installation
5cb94395ca93
·anciaux / richart on Jan 20 2021, 18:16.

Jan 18 2021

Merge branch 'master' of gitlab.com:akantu/akantu
c8476ff036c6
·anciaux on Jan 18 2021, 18:09.
making link with library ok
cbca89aac1cd
·anciaux on Jan 18 2021, 18:05.
adding setup.py.in
a5c1856a869d
·anciaux on Jan 18 2021, 16:48.
update the dockerfile for centos
a6c1d8ac45f2
·anciaux on Jan 18 2021, 16:48.

Jan 15 2021

Protect files that are not generated so cmake does not tries to install them
5eeb1ce33e27
·richart on Jan 15 2021, 16:49.
Missed to add threads in potential dependencies
6f7aad76e11a
·richart on Jan 15 2021, 16:18.
Threads is a non conventional package from cmake
7fce7553fd84
·richart on Jan 15 2021, 16:01.
Adding pthread in the possible dependencies of mumps
616e9e37614b
·richart on Jan 15 2021, 15:56.

Nov 18 2020

Merge branch 'features/ci_improvement' into 'master'
bbef626f970d
·richart on Nov 18 2020, 13:42.
Missed one TYPED_TEST_SUITE
e3342b66c75f
·richart on Nov 18 2020, 12:37.
More variadic macro solved without hiding them
48b82ddbf64c
·richart on Nov 18 2020, 11:22.
more cleaning
635b7cb827c4
·richart on Nov 18 2020, 00:48.
Bumping version number since this branch brings API breaking changes
a1669c3ab7f7
·richart on Nov 18 2020, 00:40.
Small cleaning touches
b310ad1abdcb
·richart on Nov 18 2020, 00:40.

Nov 17 2020

report not working properly
8d68e92f9ee0
·richart on Nov 17 2020, 23:35.
Bug fix when not in debug
5f8cd7967de5
·richart on Nov 17 2020, 23:20.
Reoving editorconfig from codeclimate
939218e8c341
·richart on Nov 17 2020, 17:57.
Trying out Code Quality
9ae994d2400c
·richart on Nov 17 2020, 17:04.
Adding code coverage
8b50a02ee7f5
·richart on Nov 17 2020, 16:17.
Protecting lambda not used in NDEBUG
d58650ce6dc3
·richart on Nov 17 2020, 14:37.
Removing warning in py_material RTFM...
e3967fa38675
·richart on Nov 17 2020, 14:35.
compilation bug fix when mpi is off
c435093eb4f0
·richart on Nov 17 2020, 12:57.
some linting
081da3e5b7c6
·richart on Nov 17 2020, 12:57.
removing warnings in py_material
c424f958ca1f
·richart on Nov 17 2020, 12:57.
still not enough time
d585aba2a74e
·richart on Nov 17 2020, 02:27.
Extend timeout for tests runing in debug
6b93b11bbaf9
·richart on Nov 17 2020, 00:52.

Nov 16 2020

Bug fix in the eigen-gradu, with cohesive elements
10664658c20c
·richart on Nov 16 2020, 23:02.
Debug in order to be able to do some coverage later on
99b381709af7
·richart on Nov 16 2020, 10:03.
Trying to solve the problem of artefacts
ffa5a2efe61c
·richart on Nov 16 2020, 09:04.

Nov 14 2020

keeping artefacts longer
3d77ece78ef4
·richart on Nov 14 2020, 12:39.

Nov 13 2020

improving ccache cache hits:
9078eff9146c
·richart on Nov 13 2020, 22:38.
Bug fix: rebase conflit resolution
f4783b779273
·richart on Nov 13 2020, 19:45.
sharing ccache in between builds
e3f8cc5a4768
·richart on Nov 13 2020, 18:26.
Missing marco definition for pybind11
76f62cfa3f0a
·richart on Nov 13 2020, 18:26.
Warning in pybind11
93b4beb364a7
·richart on Nov 13 2020, 18:26.
Correcting deprecated pybind code
33ef5c2570c3
·richart on Nov 13 2020, 18:26.
Minor improvements to help debugging
4090a168ad5e
·richart on Nov 13 2020, 18:26.
bug fix in mesh distribution
da19e76c141c
·richart on Nov 13 2020, 18:26.
Bug fix in size computation
234da74828e9
·richart on Nov 13 2020, 18:25.
bug fix in parallel test_cohesive
79c61bda7828
·richart on Nov 13 2020, 18:25.
bug fix in the insertion of 3d elements
4f92994b7984
·richart on Nov 13 2020, 18:25.
Full rewrite of cohesive insertion to ensure the order of insertion across…
19086cd4e3db
·richart on Nov 13 2020, 18:25.
Test fix when no implicit solver present
0c0644a4376c
·richart on Nov 13 2020, 18:25.
Bug fix
352e8963cc1b
·richart on Nov 13 2020, 18:25.
Accounting for stupid version of compilers
6499a1de98dd
·richart on Nov 13 2020, 18:25.
Remaining semicolon
e94e01ed97c3
·richart on Nov 13 2020, 18:25.
clang-tidy
afd7269e93f5
·richart on Nov 13 2020, 18:25.
Modified visibility and headers in pybind interface
c5371a97cb63
·richart on Nov 13 2020, 18:25.
This closes #1, problem with `-j auto` in versions prior to 1.7
85b7d11bb6db
·richart on Nov 13 2020, 18:25.
Bug fix in non_local cleanup
ae5a25c2bfad
·richart on Nov 13 2020, 18:25.
A bit of cleanup of the code
10b19a5ee178
·richart on Nov 13 2020, 18:25.
Change in pybind11 compilation
987ebdfa2479
·richart on Nov 13 2020, 12:03.
Missing openmpi configuration and renaing of docker config folders
57a358fd660b
·richart on Nov 13 2020, 12:03.
Bug fixes and compilation warning cleaning:
1ba2ccb21bb6
·richart on Nov 13 2020, 12:03.
[ci] Extanding the ci:
1388de54d3a1
·richart on Nov 13 2020, 12:03.
Adding git information to the code
4a441565a071
·richart on Nov 13 2020, 12:02.
Merge branch 'master' of c4science:/diffusion/AKAPRIV/akantu-private into master
cfdd63f214a7
·richart on Nov 13 2020, 09:54.

Oct 8 2020

Changed the way eigen grad u can be set from the material file
33c80c6b352e
·richart on Oct 8 2020, 18:58.
Merge branch 'master' of gitlab.com:akantu/akantu into HEAD
328d00db66a9
·anciaux on Oct 8 2020, 15:34.
register the eigen gradu as a material parameter
af9a0441ec8d
·anciaux on Oct 8 2020, 15:33.

Oct 6 2020

Merge branch 'ganciaux/akantu-master' into master
16e090c3014d
·richart on Oct 6 2020, 13:54.

Oct 1 2020

Fixed a configuration error in cmake seen on centos8, cmake-3.11.4
e2604129e9be
·anciaux on Oct 1 2020, 17:41.

Jul 21 2020

Bug fix
4215a7d58310
·richart on Jul 21 2020, 10:39.
Extanding the python interface of FEEngine and cohesive element
ca74d069169a
·richart on Jul 21 2020, 09:29.

Historyfeatures/30-implementin…c6875ddd87e349599f63d63…

Feb 20 2021

Feb 19 2021

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Jan 20 2021

Jan 18 2021

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Nov 18 2020

Nov 17 2020

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Oct 1 2020

Jul 21 2020

History
features/30-implementin…c6875ddd87e349599f63d63…