Diffusion akantu (features/changes-to-address-joss-review) History

History
features/changes-to…4bee089d65426a013c64312…

Aug 4 2015

Modification to make akantu compile with long int (64bit idx) Still has to…
4bee089d6542
·richart on Aug 4 2015, 23:24.
Bug fix for python
4cfea41bf633
·richart on Aug 4 2015, 17:45.
Fix for files that are only in a branch for now
2b41c6049562
·richart on Aug 4 2015, 16:24.
Merge branch 'master' of lsmssrv1.epfl.ch:akantu
d8d4b8982704
·richart on Aug 4 2015, 16:20.
Modifications to be able to compile akantu in float
88ec5e44af0b
·richart on Aug 4 2015, 16:19.
removed warning for missing _point_1.msh
7096a8ee1288
·richart on Aug 4 2015, 16:15.

Aug 3 2015

automatic conversion and check of numpy/Akantu arrays
a4fcb7a89308
·anciaux on Aug 3 2015, 18:18.
Merge branch 'master' of lsmssrv1.epfl.ch:akantu
8a136b183f21
·richart on Aug 3 2015, 10:39.
reactivated the compilation of examples with chenger of package system
a847f8befd96
·richart on Aug 3 2015, 10:38.
Merge branch 'master' of gitolite:akantu
4ee09abbe88d
·anciaux on Aug 3 2015, 00:47.
splitting in several files the swig warppers
09cf306d8802
·anciaux on Aug 3 2015, 00:47.

Jul 31 2015

test_local_material is now actually testing the damage model
47c6b20d5c70
·Clement Roux on Jul 31 2015, 10:50.

Jul 30 2015

AKANTU review, ticket 51
f02a49090f3d
·Clement Roux on Jul 30 2015, 14:27.

Jul 24 2015

forcing version 3 of swig
7d9124f4097e
·anciaux on Jul 24 2015, 11:59.

Jul 23 2015

fix compilation error
8bf24b72b2d9
·anciaux on Jul 23 2015, 17:49.
Merge branch 'master' of gitolite:akantu
087d7e771c84
·anciaux on Jul 23 2015, 16:59.
improving python interface to iterate csr
fe55d8ba0934
·anciaux on Jul 23 2015, 16:59.

Jul 22 2015

separation for test_segment_intersection_*
c3702d2464e1
·Lucas Frérot on Jul 22 2015, 15:55.
fixed bug in MeshSphereIntersector
13659b265c30
·Lucas Frérot on Jul 22 2015, 14:59.
non const mesh in geometry module + cleanup + performance of compareSegments
571e9e349498
·Lucas Frérot on Jul 22 2015, 12:16.

Jul 21 2015

fix the initPBC of heat transfer model
1776da21a721
·anciaux on Jul 21 2015, 14:10.
add the synchronizer to python
f8b881f6c275
·anciaux on Jul 21 2015, 14:09.
extend resize for temp Array for python and allow setmodetext to models
7d2223d91ea9
·anciaux on Jul 21 2015, 12:11.
extend resize for temp Array for python
58763ce8bf48
·anciaux on Jul 21 2015, 12:10.
remove useless log
c62fef079db6
·anciaux on Jul 21 2015, 12:10.
prevent swig compilation with c++11: temporary ?
ee7949aecd03
·anciaux on Jul 21 2015, 11:44.
passing the correct flags to swig
97791428f8e0
·anciaux on Jul 21 2015, 10:02.

Jul 20 2015

Correcting python intreface for commits on moving element declaration in cmake
4407e5eaa7b8
·richart on Jul 20 2015, 00:22.

Jul 19 2015

PackageSystem correction
dae6cdd96b37
·richart on Jul 19 2015, 23:17.
updateing meta data of submodules
2169e26115cd
·richart on Jul 19 2015, 23:16.
ensuring that every element are tested
3f4dbe5670f1
·richart on Jul 19 2015, 23:02.
small modification to help debug
df46d616a18b
·richart on Jul 19 2015, 22:14.
removing warnings
2efaf2711a76
·richart on Jul 19 2015, 22:04.
Modified cmake to declare the element info in the packages
4f7c66ec2034
·richart on Jul 19 2015, 22:04.
bug fix du to multiple facet modification
0c32f434c9c9
·richart on Jul 19 2015, 21:59.

Jul 18 2015

Extracted the generation of the material lists to the cmake packages
75f47bf63c6d
·richart on Jul 18 2015, 23:28.
Merge branch 'master' of lsmssrv1.epfl.ch:akantu
fae00fa0f27f
·richart on Jul 18 2015, 23:02.
Extracted the generation of the material lists to the cmake packages
b4d2d371d9b0
·richart on Jul 18 2015, 22:49.
Changing the way the pacakge system is coded to factorize code
1329a3fa2a51
·richart on Jul 18 2015, 22:47.

Jul 17 2015

offer possibility to compute conductivity yourself
2f3754aa6ba1
·anciaux on Jul 17 2015, 22:35.
Merge branch 'master' of gitolite:akantu
4ad0af8ecdb5
·anciaux on Jul 17 2015, 22:07.
fix bug on dumpers for heat transfer model + test on imlpicit compute for…
1674fb67f8ca
·anciaux on Jul 17 2015, 22:06.
Specific check to handle mesh sphere intersection with an intersection on a node
880d1a7dac46
·Clement Roux on Jul 17 2015, 19:05.
Merge branch 'master' of gitolite:akantu
11db6ef0ee01
·anciaux on Jul 17 2015, 17:37.
add interpolateOnQuadraturePoints routine to FEEngine in python
6f04e32ec274
·anciaux on Jul 17 2015, 17:37.
provide possibility to compute conductivity matrix
2350e9719ce4
·anciaux on Jul 17 2015, 15:16.
Update and bug correction in the mesh_sphere_intersector
8fc612863c9d
·Clement Roux on Jul 17 2015, 13:48.
Merge branch 'master' of lsmssrv1.epfl.ch:akantu
a95c65d3c864
·corrado on Jul 17 2015, 08:07.
update of test_*_hexahedron_20 after the increase of the gauss points from 8 to…
0d532e36a471
·corrado on Jul 17 2015, 08:06.

Jul 16 2015

forward Akantu exception to python
dcfbff4a2461
·anciaux on Jul 16 2015, 14:22.
Merge branch 'master' of lsmssrv1.epfl.ch:akantu
fae36952fc8a
·corrado on Jul 16 2015, 11:06.
increase of the nb of gauss points for integration in hexahedron_20…
7df722be95d8
·corrado on Jul 16 2015, 10:52.

Jul 15 2015

adding heat transfer to python interface
5bcfd0771d3d
·anciaux on Jul 15 2015, 21:51.
adding heat transfer to python interface
9569c355e6d1
·anciaux on Jul 15 2015, 21:51.
Merge branch 'master' of gitolite:akantu
2545d01c6ef9
·anciaux on Jul 15 2015, 19:19.
removing some python warnings
9b63b4247a36
·anciaux on Jul 15 2015, 13:41.
making python interface option visible
715894b1c892
·anciaux on Jul 15 2015, 11:41.

Jul 14 2015

adding pentahedron types to the patch tests
c5a4b6303011
·richart on Jul 14 2015, 20:38.
extending functions for element with more than one type of facet elements
0eff9d9a6cae
·richart on Jul 14 2015, 20:37.
Merge branch 'master' of lsmssrv1.epfl.ch:akantu
1cf39b5a9ee5
·LSMS Tester on Jul 14 2015, 20:28.
correction for the python interface
9c0597a826d0
·LSMS Tester on Jul 14 2015, 20:21.
Merge branch 'master' of gitolite:akantu
6f0f0a2ddfdb
·anciaux on Jul 14 2015, 18:05.
corrected dump bug for embedded model + cosine matrix bug
40bd5412cc79
·Lucas Frérot on Jul 14 2015, 17:47.
bug fix on mass of _tetrahedron_10
373658865f8f
·richart on Jul 14 2015, 16:39.
Merge branch 'master' of lsmssrv1.epfl.ch:akantu
56d13df290a5
·richart on Jul 14 2015, 15:40.
Correction of parsable output that made a test in release mode fail +…
7d901b4eee46
·richart on Jul 14 2015, 15:38.
interpolation function in shape lagrange added to be able to compile the…
50c5f08da47b
·Aurelia Cuba Ramos on Jul 14 2015, 14:18.
Merge branch 'master' of lsmssrv1.epfl.ch:akantu
be8aed2cefbf
·Aurelia Cuba Ramos on Jul 14 2015, 13:33.
add a reference to the feengine the material, modification to dynamically…
89088a68b210
·Aurelia Cuba Ramos on Jul 14 2015, 13:26.
includes for dumping of IGFEM elements added, bug fix in homogenizer
0f7f0314f6cd
·Aurelia Cuba Ramos on Jul 14 2015, 12:51.
interpolation function added in FEEngine, numerical tolerance added to the…
6bd56086568c
·Aurelia Cuba Ramos on Jul 14 2015, 12:49.

Jul 13 2015

fixed bug in cosine matrix (MaterialReinforcement)
b3668a068626
·Lucas Frérot on Jul 13 2015, 18:12.
made use of intersectors easier with MeshAbstractIntersector
77064f508581
·Lucas Frérot on Jul 13 2015, 18:09.
Merge branch 'master' of gitolite:akantu
adf62ab5e66d
·anciaux on Jul 13 2015, 16:35.
fixing the heat transfer tests
a65be22768ca
·anciaux on Jul 13 2015, 16:34.
updateing meta data of submodules
3304043c0c61
·richart on Jul 13 2015, 16:21.
Merge branch 'master' of lsmssrv1.epfl.ch:akantu
070a0968f192
·richart on Jul 13 2015, 16:20.
Renaming of test_fem to test_fe_engine
6b4b0849fcd9
·richart on Jul 13 2015, 16:20.
Change of array output to correct the fe_engine test in Release mode
0b8d00ba3541
·richart on Jul 13 2015, 16:14.
bug fix2: geometry no longer use igfem type if AKANTU_IGFEM == false
eb4edae5197c
·Clement Roux on Jul 13 2015, 11:48.
bug fix: geometry no longer use igfem type if AKANTU_IGFEM == false
e628a4c48c38
·Clement Roux on Jul 13 2015, 11:32.

Jul 10 2015

Merge branch 'master' of lsmssrv1.epfl.ch:akantu
a6d17d8f6d59
·Clement Roux on Jul 10 2015, 14:50.
mesh sphere intersector ready for growing gel pockets
183a75ee20a5
·Clement Roux on Jul 10 2015, 14:50.

Jul 9 2015

fixed bugs in dumper for embedded model
c846efc4c5fd
·Lucas Frérot on Jul 9 2015, 14:54.
Use of exact number type for spherical kernel with test tetrahedron
a8b4896b3c64
·Clement Roux on Jul 9 2015, 10:37.
Use of exact number type for spherical kernel
b2845cd192b7
·Clement Roux on Jul 9 2015, 10:34.

Jul 8 2015

Merge branch 'master' of lsmssrv1.epfl.ch:akantu
c85f20da195d
·Aurelia Cuba Ramos on Jul 8 2015, 16:35.
update module revisions
4db55090cd6b
·anciaux on Jul 8 2015, 14:39.
update module revisions
ba2783717761
·anciaux on Jul 8 2015, 14:39.
Merge branch 'master' of gitolite:akantu
97a52bf3f53e
·anciaux on Jul 8 2015, 14:38.
try to adapt the verification script
4faaebe44a13
·anciaux on Jul 8 2015, 14:37.
Merge branch 'master' of lsmssrv1.epfl.ch:akantu
a96f3a10e04a
·Aurelia Cuba Ramos on Jul 8 2015, 12:39.
bug fix in mesh-sphere intersector: element kind of new elements has to be…
721c4b4a7265
·Aurelia Cuba Ramos on Jul 8 2015, 12:22.
function in feengine to determine IGFEMTypes of regular elements, initArray in…
aa7e201ebcbd
·Aurelia Cuba Ramos on Jul 8 2015, 12:20.
asserts for range of access of matrix, vector and tensor3 objects added…
e4b33a973bf9
·Aurelia Cuba Ramos on Jul 8 2015, 12:13.
bug fix to make dumper work if first type of the mesh is empty
3ab0be6fe3e8
·Aurelia Cuba Ramos on Jul 8 2015, 12:08.

Jul 6 2015

update meta data of submodules
55e90342ba10
·richart on Jul 6 2015, 11:04.
Merge branch 'master' of lsmssrv1.epfl.ch:akantu
72bb2475c8ca
·richart on Jul 6 2015, 10:00.
missing values in the reader
1b154aa804de
·richart on Jul 6 2015, 10:00.
update meta info of submodules
109da52aa04d
·richart on Jul 6 2015, 09:41.

Historyfeatures/changes-to…4bee089d65426a013c64312…

Aug 4 2015

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Jul 6 2015

History
features/changes-to…4bee089d65426a013c64312…