Diffusion akantu (features/changes-to-address-joss-review) History

History
features/changes-to…73fb168cae5a498b358db64…

Mar 12 2021

Adding clang-tidy to code-quality
73fb168cae5a
·richart on Mar 12 2021, 23:35.
trying to improve code quality report
b1051faa5603
·richart on Mar 12 2021, 23:35.
Wrong dependency
6efd971209a6
·richart on Mar 12 2021, 23:35.
Trying to correct clang-tidy
10ce799f849b
·richart on Mar 12 2021, 23:35.
Working on the coverage a bit more
0374a1ec8eb7
·richart on Mar 12 2021, 23:35.
Wrong image for clang-tidy
714c30291729
·richart on Mar 12 2021, 23:35.
Typo in Linker
d472b1ddcdd8
·richart on Mar 12 2021, 23:35.
Correcting coverage badly reported
3c30c6bbe8a0
·richart on Mar 12 2021, 23:35.
Adding code-quality clang-tidy
f8f6f36c6275
·richart on Mar 12 2021, 23:35.
Do not want remarks on the Cognitive impact on tests
7de99b2c7036
·richart on Mar 12 2021, 23:35.
Remaining warning
e430fa546b0e
·richart on Mar 12 2021, 23:35.
Copy paste error in the target name
62992923ac0f
·richart on Mar 12 2021, 23:35.
Trying to remove warnings from pybind11 includes
851dabec11da
·richart on Mar 12 2021, 23:35.
Bug fix in a cohesive example
8a61d3b9ea31
·richart on Mar 12 2021, 23:35.
Impriving codeclimate configuration
7fadf7358e81
·richart on Mar 12 2021, 23:35.

Mar 10 2021

Merge branch 'features/energy_computations' into 'master'
f7cd1d1879d1
·tdroch on Mar 10 2021, 10:47.
Fix element acces via getElementIterable
b40ed4c089ac
·tdroch / richart on Mar 10 2021, 09:10.
Adding concatenate iterator
da02a7590df4
·richart on Mar 10 2021, 09:10.
Adding energy computation per element group
f672a1a401c6
·richart on Mar 10 2021, 09:10.
Iterate elements in element group
8bfc8a139bc6
·richart on Mar 10 2021, 09:10.

Mar 8 2021

Merge branch 'master' into 'master'
7877708ac182
·richart on Mar 8 2021, 16:38.
improving package system for when included as a third-party module
6d8435ad83c8
·anciaux on Mar 8 2021, 11:16.

Feb 7 2021

Chang zlib includes in iohelper
5ab846000289
·richart on Feb 7 2021, 19:40.

Feb 6 2021

Removing submodules
7c7393849507
·richart on Feb 6 2021, 18:28.

Jan 20 2021

Merge branch 'master' into 'master'
3c8cc7d31cc9
·richart on Jan 20 2021, 18:16.
Correct the akantu config to be correct in spack installation
5cb94395ca93
·anciaux / richart on Jan 20 2021, 18:16.

Jan 18 2021

Merge branch 'master' of gitlab.com:akantu/akantu
c8476ff036c6
·anciaux on Jan 18 2021, 18:09.
making link with library ok
cbca89aac1cd
·anciaux on Jan 18 2021, 18:05.
adding setup.py.in
a5c1856a869d
·anciaux on Jan 18 2021, 16:48.
update the dockerfile for centos
a6c1d8ac45f2
·anciaux on Jan 18 2021, 16:48.

Jan 15 2021

Protect files that are not generated so cmake does not tries to install them
5eeb1ce33e27
·richart on Jan 15 2021, 16:49.
Missed to add threads in potential dependencies
6f7aad76e11a
·richart on Jan 15 2021, 16:18.
Threads is a non conventional package from cmake
7fce7553fd84
·richart on Jan 15 2021, 16:01.
Adding pthread in the possible dependencies of mumps
616e9e37614b
·richart on Jan 15 2021, 15:56.

Nov 18 2020

Merge branch 'features/ci_improvement' into 'master'
bbef626f970d
·richart on Nov 18 2020, 13:42.
Missed one TYPED_TEST_SUITE
e3342b66c75f
·richart on Nov 18 2020, 12:37.
More variadic macro solved without hiding them
48b82ddbf64c
·richart on Nov 18 2020, 11:22.
more cleaning
635b7cb827c4
·richart on Nov 18 2020, 00:48.
Bumping version number since this branch brings API breaking changes
a1669c3ab7f7
·richart on Nov 18 2020, 00:40.
Small cleaning touches
b310ad1abdcb
·richart on Nov 18 2020, 00:40.

Nov 17 2020

report not working properly
8d68e92f9ee0
·richart on Nov 17 2020, 23:35.
Bug fix when not in debug
5f8cd7967de5
·richart on Nov 17 2020, 23:20.
Reoving editorconfig from codeclimate
939218e8c341
·richart on Nov 17 2020, 17:57.
Trying out Code Quality
9ae994d2400c
·richart on Nov 17 2020, 17:04.
Adding code coverage
8b50a02ee7f5
·richart on Nov 17 2020, 16:17.
Protecting lambda not used in NDEBUG
d58650ce6dc3
·richart on Nov 17 2020, 14:37.
Removing warning in py_material RTFM...
e3967fa38675
·richart on Nov 17 2020, 14:35.
compilation bug fix when mpi is off
c435093eb4f0
·richart on Nov 17 2020, 12:57.
some linting
081da3e5b7c6
·richart on Nov 17 2020, 12:57.
removing warnings in py_material
c424f958ca1f
·richart on Nov 17 2020, 12:57.
still not enough time
d585aba2a74e
·richart on Nov 17 2020, 02:27.
Extend timeout for tests runing in debug
6b93b11bbaf9
·richart on Nov 17 2020, 00:52.

Nov 16 2020

Bug fix in the eigen-gradu, with cohesive elements
10664658c20c
·richart on Nov 16 2020, 23:02.
Debug in order to be able to do some coverage later on
99b381709af7
·richart on Nov 16 2020, 10:03.
Trying to solve the problem of artefacts
ffa5a2efe61c
·richart on Nov 16 2020, 09:04.

Nov 14 2020

keeping artefacts longer
3d77ece78ef4
·richart on Nov 14 2020, 12:39.

Nov 13 2020

improving ccache cache hits:
9078eff9146c
·richart on Nov 13 2020, 22:38.
Bug fix: rebase conflit resolution
f4783b779273
·richart on Nov 13 2020, 19:45.
sharing ccache in between builds
e3f8cc5a4768
·richart on Nov 13 2020, 18:26.
Missing marco definition for pybind11
76f62cfa3f0a
·richart on Nov 13 2020, 18:26.
Warning in pybind11
93b4beb364a7
·richart on Nov 13 2020, 18:26.
Correcting deprecated pybind code
33ef5c2570c3
·richart on Nov 13 2020, 18:26.
Minor improvements to help debugging
4090a168ad5e
·richart on Nov 13 2020, 18:26.
bug fix in mesh distribution
da19e76c141c
·richart on Nov 13 2020, 18:26.
Bug fix in size computation
234da74828e9
·richart on Nov 13 2020, 18:25.
bug fix in parallel test_cohesive
79c61bda7828
·richart on Nov 13 2020, 18:25.
bug fix in the insertion of 3d elements
4f92994b7984
·richart on Nov 13 2020, 18:25.
Full rewrite of cohesive insertion to ensure the order of insertion across…
19086cd4e3db
·richart on Nov 13 2020, 18:25.
Test fix when no implicit solver present
0c0644a4376c
·richart on Nov 13 2020, 18:25.
Bug fix
352e8963cc1b
·richart on Nov 13 2020, 18:25.
Accounting for stupid version of compilers
6499a1de98dd
·richart on Nov 13 2020, 18:25.
Remaining semicolon
e94e01ed97c3
·richart on Nov 13 2020, 18:25.
clang-tidy
afd7269e93f5
·richart on Nov 13 2020, 18:25.
Modified visibility and headers in pybind interface
c5371a97cb63
·richart on Nov 13 2020, 18:25.
This closes #1, problem with `-j auto` in versions prior to 1.7
85b7d11bb6db
·richart on Nov 13 2020, 18:25.
Bug fix in non_local cleanup
ae5a25c2bfad
·richart on Nov 13 2020, 18:25.
A bit of cleanup of the code
10b19a5ee178
·richart on Nov 13 2020, 18:25.
Change in pybind11 compilation
987ebdfa2479
·richart on Nov 13 2020, 12:03.
Missing openmpi configuration and renaing of docker config folders
57a358fd660b
·richart on Nov 13 2020, 12:03.
Bug fixes and compilation warning cleaning:
1ba2ccb21bb6
·richart on Nov 13 2020, 12:03.
[ci] Extanding the ci:
1388de54d3a1
·richart on Nov 13 2020, 12:03.
Adding git information to the code
4a441565a071
·richart on Nov 13 2020, 12:02.
Merge branch 'master' of c4science:/diffusion/AKAPRIV/akantu-private into master
cfdd63f214a7
·richart on Nov 13 2020, 09:54.

Oct 8 2020

Changed the way eigen grad u can be set from the material file
33c80c6b352e
·richart on Oct 8 2020, 18:58.
Merge branch 'master' of gitlab.com:akantu/akantu into HEAD
328d00db66a9
·anciaux on Oct 8 2020, 15:34.
register the eigen gradu as a material parameter
af9a0441ec8d
·anciaux on Oct 8 2020, 15:33.

Oct 6 2020

Merge branch 'ganciaux/akantu-master' into master
16e090c3014d
·richart on Oct 6 2020, 13:54.

Oct 1 2020

Fixed a configuration error in cmake seen on centos8, cmake-3.11.4
e2604129e9be
·anciaux on Oct 1 2020, 17:41.

Jul 21 2020

Bug fix
4215a7d58310
·richart on Jul 21 2020, 10:39.
Extanding the python interface of FEEngine and cohesive element
ca74d069169a
·richart on Jul 21 2020, 09:29.

Jun 25 2020

Merge branch 'master' of gitlab.com:akantu/akantu
508d6617baf7
·richart on Jun 25 2020, 20:25.
Correction for cmake 3.10
742364c99d4d
·richart on Jun 25 2020, 20:24.

Jun 23 2020

remove prank and psize from communicator.hh
8450d7483d8b
·anciaux on Jun 23 2020, 14:06.

Jun 17 2020

fix rotation wrongly inserted in the natural coordinates for tetrahedron4
d20eb7635e54
·anciaux on Jun 17 2020, 17:24.
raise threshold strain for modeI insertion check
5519bbcd922a
·anciaux on Jun 17 2020, 17:24.

Jun 8 2020

Bug fixed : multiple cohesive materials in extrinsic insertion
14d51fa1489c
·pundir on Jun 8 2020, 18:14.

May 8 2020

[doc] making the config a bit more generic
2151bd13ad75
·richart on May 8 2020, 17:02.
[doc] removing unused files
8aeeb3ef8673
·richart on May 8 2020, 17:02.

May 7 2020

[doc] using existing doxygen index for namespace akantu
f7ff56aa871c
·frerot on May 7 2020, 22:30.
[doc] integrating sphinx user manual with cmake-built doc
895ed3f8046c
·frerot on May 7 2020, 22:08.

Historyfeatures/changes-to…73fb168cae5a498b358db64…

Mar 12 2021

Mar 10 2021

Mar 8 2021

Feb 7 2021

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Jan 18 2021

Jan 15 2021

Nov 18 2020

Nov 17 2020

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Nov 14 2020

Nov 13 2020

Oct 8 2020

Oct 6 2020

Oct 1 2020

Jul 21 2020

Jun 25 2020

Jun 23 2020

Jun 17 2020

Jun 8 2020

May 8 2020

May 7 2020

History
features/changes-to…73fb168cae5a498b358db64…