Diffusion akantu (features/changes-to-address-joss-review) History

History
features/changes-to…797ec47f34787a0affd9bed…

Mar 14 2021

Bug fixes in examples
797ec47f3478
·richart on Mar 14 2021, 13:52.

Mar 13 2021

making matplotib optional for the ci
a81c6b33ae37
·richart on Mar 13 2021, 23:38.
Fixing dumper warnings
d7eb0b0c18be
·richart on Mar 13 2021, 23:38.
Adapting due to changes in structural mechanics
95d0dced15d1
·richart on Mar 13 2021, 19:14.
Merge branch 'master' into features/material_internals_memory
9cb01e0c3a12
·richart on Mar 13 2021, 15:31.
Merge branch 'bugfixes/dynamics_structural_mechnanics' into 'master'
cc50b397b4ba
·richart on Mar 13 2021, 15:29.
Merge branch 'master' into features/material_internals_memory
12c0a090caee
·richart on Mar 13 2021, 14:42.
Merge branch 'master' into bugfixes/dynamics_structural_mechnanics
db203e90b229
·branch: bugfixes/dynamics_structural_mechnanics
·richart on Mar 13 2021, 13:23.
Merge branch 'features/doc' into 'master'
1b9c3cd9e78d
·richart on Mar 13 2021, 13:22.
Merge branch 'master' into 'features/doc'
cee77eb64fae
·richart on Mar 13 2021, 10:32.
Merge branch 'features/ci_code_quality' into 'master'
eb43f181a4cb
·richart on Mar 13 2021, 10:30.
Cleaning the structural mechanics python examples
e3075f54d103
·richart on Mar 13 2021, 10:29.
modified doc deploy branch to master
bd91a3346147
·richart on Mar 13 2021, 00:23.

Mar 12 2021

Deactivating clang-tidy, needs improvements
3a985b5b05ed
·richart on Mar 12 2021, 23:35.
Adding sphinxcontrib bibtex to the docker image
87018e564d38
·richart on Mar 12 2021, 23:35.
Reducing checks to make it faster
44b77edd375b
·richart on Mar 12 2021, 23:35.
Improving a bit the code
ffccf8161507
·richart on Mar 12 2021, 23:35.
Cleaning the linting code
847f1fbd4e3b
·richart on Mar 12 2021, 23:35.
More work on the code quality
fe44bbafd3ee
·richart on Mar 12 2021, 23:35.
Debugging the runner for clang-tidy
5a0113389fcb
·richart on Mar 12 2021, 23:35.
Parse all files
92d6c0d0324b
·richart on Mar 12 2021, 23:35.
Trying to activate dev engines
eebbf94c1a82
·richart on Mar 12 2021, 23:35.
Adding clang-tidy to code-quality
94051cfb5abd
·richart on Mar 12 2021, 23:35.
trying to improve code quality report
bba044d80b99
·richart on Mar 12 2021, 23:35.
Wrong dependency
ed438a2d53ec
·richart on Mar 12 2021, 23:35.
Trying to correct clang-tidy
d920212c2bf3
·richart on Mar 12 2021, 23:35.
Working on the coverage a bit more
3893b550aa4f
·richart on Mar 12 2021, 23:35.
Wrong image for clang-tidy
118ed1c6090c
·richart on Mar 12 2021, 23:35.
Typo in Linker
db45c33d5ad0
·richart on Mar 12 2021, 23:35.
Correcting coverage badly reported
f35b21b71449
·richart on Mar 12 2021, 23:35.
Adding code-quality clang-tidy
a13f3874ff27
·richart on Mar 12 2021, 23:35.
Do not want remarks on the Cognitive impact on tests
70834eaaf950
·richart on Mar 12 2021, 23:35.
Remaining warning
2f1d8a6aecd8
·richart on Mar 12 2021, 23:35.
Copy paste error in the target name
7b357e2dce56
·richart on Mar 12 2021, 23:35.
Trying to remove warnings from pybind11 includes
d5fb526af36e
·richart on Mar 12 2021, 23:35.
Bug fix in a cohesive example
978f61b1c0a8
·richart on Mar 12 2021, 23:35.
Impriving codeclimate configuration
2cc6e44de178
·richart on Mar 12 2021, 23:35.
reactivating running examples
29cedb86df59
·richart on Mar 12 2021, 23:25.
Missing include
af769218ef0b
·richart on Mar 12 2021, 23:24.
Merge branch 'master' into bugfixes/dynamics_structural_mechnanics
3d1bde8e1dbb
·richart on Mar 12 2021, 23:01.
Adding logo to sphinx
819ef344f5a5
·richart on Mar 12 2021, 22:48.
[doc] formatting fixes
4f86a0ad6046
·frerot / richart on Mar 12 2021, 22:48.
adding structural mechanics model
f87f25030886
·richart on Mar 12 2021, 22:48.
Adding heattransfer
cc75abd257eb
·richart on Mar 12 2021, 22:48.
Adding structural mechanics
572e2780389e
·richart on Mar 12 2021, 22:48.
Adding materials, cohesive elements and I/O
a002c795a1d1
·richart on Mar 12 2021, 22:48.
adding appendix
569d469c9b20
·richart on Mar 12 2021, 22:48.
Cleaning the cmake for the documentation
26435e182a87
·richart on Mar 12 2021, 22:48.
advancing on the doc
08e2a678a1c1
·richart on Mar 12 2021, 22:48.
[doc] Constitutive laws
7459fa01ffe5
·richart on Mar 12 2021, 22:48.
Adding appendix on elements
99c892d0a30d
·richart on Mar 12 2021, 22:48.
[doc] Adding constitutive laws
73bed14ec284
·richart on Mar 12 2021, 22:48.
fixed figure label
d8d410924c26
·frerot / richart on Mar 12 2021, 22:48.
added large part of solid mechanics model
1c097a758c27
·frerot / richart on Mar 12 2021, 22:48.
[doc] added generation of members in doxygen sphinx index
3b9fb8c8ce2c
·frerot / richart on Mar 12 2021, 22:48.

Mar 11 2021

Bug fix and refactoring
1159730b10be
·richart on Mar 11 2021, 23:40.

Mar 10 2021

Reactivating the default values for arrays in models
d14823276f56
·richart on Mar 10 2021, 18:37.
Typo in the ci script
9a919649ad50
·richart on Mar 10 2021, 18:37.
Merge branch 'features/energy_computations' into 'master'
9f083289cd9b
·tdroch on Mar 10 2021, 10:47.
Moving code around
45d7eb9f8b4a
·richart on Mar 10 2021, 09:25.
Fix element acces via getElementIterable
74402b5c3648
·tdroch / richart on Mar 10 2021, 09:10.
Adding concatenate iterator
165958b179fb
·richart on Mar 10 2021, 09:10.
Adding energy computation per element group
6f03fe32926e
·richart on Mar 10 2021, 09:10.
Iterate elements in element group
170c4ee05db4
·richart on Mar 10 2021, 09:10.
Getting rid of the static memory
33327d9f46e4
·richart on Mar 10 2021, 00:01.

Mar 9 2021

fixed python interface for custom material and internals management
a72501b17df2
·anciaux on Mar 9 2021, 16:28.
correct a broken example
efcdea93f9b5
·anciaux on Mar 9 2021, 16:28.

Mar 8 2021

Removed a debug output.
aeea5e3d8d04
·Philip Mueller, HS on Mar 8 2021, 17:15.
Merge branch 'master' into 'master'
84842d44c0f8
·richart on Mar 8 2021, 16:38.
Updated the Python interface of the `DOFManager` .
bff781638aca
·Philip Mueller, HS on Mar 8 2021, 15:08.
Updated the text description of the `getMaterial()` functions of the structural…
1b9d3b1e2f9f
·Philip Mueller, HS on Mar 8 2021, 15:08.
improving package system for when included as a third-party module
37638c3040d5
·anciaux on Mar 8 2021, 11:16.

Mar 6 2021

Adding energy computations
8b2393966ca6
·richart on Mar 6 2021, 19:30.
Adding capability to add matrix to matrix
b9626220d63d
·richart on Mar 6 2021, 19:28.

Mar 4 2021

Adding capability to register materials by name
23a4eb17ac12
·richart on Mar 4 2021, 13:50.

Mar 3 2021

Merge branch 'bugfixes/dynamics_structural_mechnanics' of gitlab.com…
f27e60b770cd
·richart on Mar 3 2021, 15:49.
Updated the Interface of the mesh to allow the creation of the `extra_normal`…
b4da2bec742f
·Philip Mueller, HS on Mar 3 2021, 10:03.

Feb 25 2021

Bug found in the structural mechanics model
846fa0c86ab1
·richart on Feb 25 2021, 00:15.

Feb 24 2021

Adding solvers to the python interface
b37d88658024
·richart on Feb 24 2021, 12:59.
Adding structural test dynamic example
0f9b429a7a40
·richart on Feb 24 2021, 12:58.

Feb 23 2021

Added a new demonstration of the Python interface of the structural model.
c2f8664968f2
·Philip Mueller, HS on Feb 23 2021, 12:01.

Feb 22 2021

Fixed the test `test_structural_mechanics_gtest`.
e3ae5e06016f
·Philip Mueller, HS on Feb 22 2021, 15:14.

Feb 20 2021

Created a constructor for the Python version of the `StructuralMaterial`.
90b085f6bff5
·Philip Mueller on Feb 20 2021, 13:48.
Updated the Python example for teh structural mechanics.
08552281d80c
·Philip Mueller on Feb 20 2021, 13:48.
Added a second example for the Python structural mechanics part.
20b2c5957575
·Philip Mueller on Feb 20 2021, 13:30.
Continuued to change the Python test for the structural mechanics part.
bb5ed96f3c75
·Philip Mueller on Feb 20 2021, 13:30.
Fixed a typo in the CMake for generating the tests for the structural mechanics…
f3139768cd07
·Philip Mueller on Feb 20 2021, 13:30.
Updated the python interface example.
d73c423b1e45
·Philip Mueller on Feb 20 2021, 13:29.

Feb 19 2021

Corrected the Python interface of the structural mechanic wrapper.
a1a3d3e1f37c
·Philip Mueller on Feb 19 2021, 13:04.
Added the `addConnectivityType()` function to the Python mesh interface.
d128c8f2a50c
·Philip Mueller on Feb 19 2021, 13:03.
This commit fixes several bugs in the the implementation of the Python…
729a820968e3
·Philip Mueller on Feb 19 2021, 13:03.

Feb 9 2021

Fixed a bug in the import statement of the structural mechanics Python…
79c5a89e7f62
·Philip Mueller, HS on Feb 9 2021, 09:27.
restored hermite shapes
34cdde4a0ef8
·richart on Feb 9 2021, 00:42.
Refactored python tests
d44cbf7a0117
·richart on Feb 9 2021, 00:41.
Adding MeshAccessor to python and adding posibility to resize meshes
8178b1e40e10
·richart on Feb 9 2021, 00:41.

Feb 8 2021

Bug fix in the python interface of structural model
98e6ec45ecd9
·richart on Feb 8 2021, 21:18.
Initializing properly the element_material
d3f488d7feee
·richart on Feb 8 2021, 20:58.
Linting the python interface
c899d41bc065
·richart on Feb 8 2021, 20:58.
Rewriting the example as a python code, importing the proper code
26c3a5b8f03e
·richart on Feb 8 2021, 20:57.

Feb 7 2021

Chang zlib includes in iohelper
5fc2d6a428ab
·richart on Feb 7 2021, 19:40.

Historyfeatures/changes-to…797ec47f34787a0affd9bed…

Mar 14 2021

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Mar 12 2021

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Mar 6 2021

Mar 4 2021

Mar 3 2021

Feb 25 2021

Feb 24 2021

Feb 23 2021

Feb 22 2021

Feb 20 2021

Feb 19 2021

Feb 9 2021

Feb 8 2021

Feb 7 2021

History
features/changes-to…797ec47f34787a0affd9bed…