Diffusion akantu (features/changes-to-address-joss-review) History

History
features/changes-to…8f1d14ec176b31379092b65…

Nov 17 2020

removing warnings in py_material
8f1d14ec176b
·richart on Nov 17 2020, 12:57.
still not enough time
986fb0107000
·richart on Nov 17 2020, 02:27.
Extend timeout for tests runing in debug
8c4c14ccba46
·richart on Nov 17 2020, 00:52.

Nov 16 2020

Bug fix in the eigen-gradu, with cohesive elements
30d41afebedb
·richart on Nov 16 2020, 23:02.
Debug in order to be able to do some coverage later on
7824bde4aa81
·richart on Nov 16 2020, 10:03.
Trying to solve the problem of artefacts
fef91f6b2215
·richart on Nov 16 2020, 09:04.

Nov 14 2020

keeping artefacts longer
3443a944cf43
·richart on Nov 14 2020, 12:39.

Nov 13 2020

improving ccache cache hits:
e06b8ab29c69
·richart on Nov 13 2020, 22:38.
Bug fix: rebase conflit resolution
64fb0b466ebe
·richart on Nov 13 2020, 19:45.
sharing ccache in between builds
e56d3c31e766
·richart on Nov 13 2020, 18:26.
Missing marco definition for pybind11
b3bb1a6f112e
·richart on Nov 13 2020, 18:26.
Warning in pybind11
327367782b0e
·richart on Nov 13 2020, 18:26.
Correcting deprecated pybind code
3ae228d1e7a7
·richart on Nov 13 2020, 18:26.
Minor improvements to help debugging
92684d20aee0
·richart on Nov 13 2020, 18:26.
bug fix in mesh distribution
e6cb89c743c8
·richart on Nov 13 2020, 18:26.
Bug fix in size computation
7fe6b3c3c105
·richart on Nov 13 2020, 18:25.
bug fix in parallel test_cohesive
ff307afb5ce4
·richart on Nov 13 2020, 18:25.
bug fix in the insertion of 3d elements
cf7c4837cb90
·richart on Nov 13 2020, 18:25.
Full rewrite of cohesive insertion to ensure the order of insertion across…
36b61f922c3e
·richart on Nov 13 2020, 18:25.
Test fix when no implicit solver present
fad101f38cd4
·richart on Nov 13 2020, 18:25.
Bug fix
e67b19e9c27e
·richart on Nov 13 2020, 18:25.
Accounting for stupid version of compilers
996fba290d56
·richart on Nov 13 2020, 18:25.
Remaining semicolon
e430cc0cba3c
·richart on Nov 13 2020, 18:25.
clang-tidy
2494dc4e9df3
·richart on Nov 13 2020, 18:25.
Modified visibility and headers in pybind interface
ce37131bcd4f
·richart on Nov 13 2020, 18:25.
This closes #1, problem with `-j auto` in versions prior to 1.7
2d642dd472d8
·richart on Nov 13 2020, 18:25.
Bug fix in non_local cleanup
a7cedbf9906c
·richart on Nov 13 2020, 18:25.
A bit of cleanup of the code
18bc82b3bd6a
·richart on Nov 13 2020, 18:25.
Change in pybind11 compilation
d0b63cea21e3
·richart on Nov 13 2020, 12:03.
Missing openmpi configuration and renaing of docker config folders
e8e7d2bf51f7
·richart on Nov 13 2020, 12:03.
Bug fixes and compilation warning cleaning:
1f6666b97403
·richart on Nov 13 2020, 12:03.
[ci] Extanding the ci:
1ca3bf659e84
·richart on Nov 13 2020, 12:03.
Adding git information to the code
5cc4b76ac4b6
·richart on Nov 13 2020, 12:02.
Merge branch 'master' of c4science:/diffusion/AKAPRIV/akantu-private into master
8f5380fd35d3
·richart on Nov 13 2020, 09:54.

Oct 8 2020

Changed the way eigen grad u can be set from the material file
baacd6b48076
·richart on Oct 8 2020, 18:58.
Merge branch 'master' of gitlab.com:akantu/akantu into HEAD
23f4ae96ca18
·anciaux on Oct 8 2020, 15:34.
register the eigen gradu as a material parameter
5c8a4684bc7f
·anciaux on Oct 8 2020, 15:33.

Oct 6 2020

Merge branch 'ganciaux/akantu-master' into master
55646041beef
·richart on Oct 6 2020, 13:54.

Oct 1 2020

Fixed a configuration error in cmake seen on centos8, cmake-3.11.4
eeeed5ece489
·anciaux on Oct 1 2020, 17:41.

Jul 21 2020

Bug fix
5cae7298abb3
·richart on Jul 21 2020, 10:39.
Extanding the python interface of FEEngine and cohesive element
f7d749d67510
·richart on Jul 21 2020, 09:29.

Jun 25 2020

Merge branch 'master' of gitlab.com:akantu/akantu
a4d44e4da579
·richart on Jun 25 2020, 20:25.
Correction for cmake 3.10
f1e8f3e6fe75
·richart on Jun 25 2020, 20:24.

Jun 23 2020

remove prank and psize from communicator.hh
3fb8ce4a66af
·anciaux on Jun 23 2020, 14:06.

Jun 17 2020

fix rotation wrongly inserted in the natural coordinates for tetrahedron4
04f84f3897ff
·anciaux on Jun 17 2020, 17:24.
raise threshold strain for modeI insertion check
6c2319dba2b2
·anciaux on Jun 17 2020, 17:24.

Jun 8 2020

Bug fixed : multiple cohesive materials in extrinsic insertion
03d3e280c971
·pundir on Jun 8 2020, 18:14.

May 8 2020

[doc] making the config a bit more generic
4bf20f1e8c72
·richart on May 8 2020, 17:02.
[doc] removing unused files
1a968ca404b5
·richart on May 8 2020, 17:02.

May 7 2020

[doc] using existing doxygen index for namespace akantu
c093aeb2cc0f
·frerot on May 7 2020, 22:30.
[doc] integrating sphinx user manual with cmake-built doc
a8db5fc939de
·frerot on May 7 2020, 22:08.
Merge branch 'features/sphinx'
5d3608468b0a
·frerot on May 7 2020, 20:41.
[user manual] added feengine chapter with isoparametric elements
cbccffa9957f
·frerot on May 7 2020, 00:23.

May 6 2020

Merge branch 'master' of gitlab.com:akantu/akantu
95f643fbb529
·richart on May 6 2020, 20:20.
Modifications for the documentation
f2b54f6e0331
·richart on May 6 2020, 20:17.

Mar 25 2020

Merge branch 'master' of gitlab.com:akantu/akantu
a80e6d048c5a
·anciaux on Mar 25 2020, 16:46.
if sequential, should exchange information for the pbc
f12826f744d5
·anciaux on Mar 25 2020, 16:29.
extend python interface for dofmanager
c5c7617d4862
·anciaux on Mar 25 2020, 16:28.

Mar 24 2020

Adding a check on forces in patch test
c9c0de0546d5
·richart on Mar 24 2020, 11:24.
Deactivating the copy as target, copy at configure instead
835ec6cebe6a
·richart on Mar 24 2020, 11:23.
Merge branch 'master' of gitlab.com:akantu/akantu
9d71cf55d088
·richart on Mar 24 2020, 09:06.
small bug fix
e8a7879155ab
·richart on Mar 24 2020, 09:06.

Mar 18 2020

remove a test not suposed to run in sequential
dff47ba9dac7
·anciaux on Mar 18 2020, 18:43.
removes a wrong clear of elastic constants in anisotropic law
4b1996c1a5f2
·anciaux on Mar 18 2020, 18:41.
allow to initialize the material manually
44a04848e239
·anciaux on Mar 18 2020, 16:17.
correct uninitialized values from materials
1ca2a17aa807
·anciaux on Mar 18 2020, 16:16.

Mar 15 2020

some changes to make PBC work again in sequential: to review
f2e4a0fa4491
·anciaux on Mar 15 2020, 09:55.

Mar 13 2020

correct a memory fault problem with the pbc
4da59a0e63c4
·anciaux on Mar 13 2020, 08:35.

Mar 11 2020

use new iterators on types
df6425cb1cd3
·anciaux on Mar 11 2020, 00:09.

Mar 9 2020

set tag upper bound based in MPI_COMM_WORLD
d751a95ffe34
·anciaux on Mar 9 2020, 17:22.

Mar 6 2020

extend communicator creation in akantu
30ae51bad185
·anciaux on Mar 6 2020, 18:20.
Merge commit '6f65103bbed23c65deb66a484bc8fb13f04216f4' into HEAD
5dd81bf14a97
·anciaux on Mar 6 2020, 13:00.

Feb 18 2020

Correcting compilation problem
d5e7e2d9fcb0
·richart on Feb 18 2020, 16:46.
Example of using python as boundary condition
b450f564df7d
·richart on Feb 18 2020, 15:02.
Adding a possibility to insert cohesive element only in some
684f4e9f9da5
·richart on Feb 18 2020, 13:02.

Feb 10 2020

added sphinx doc
ab07bcc3260a
·frerot on Feb 10 2020, 18:59.

Jan 24 2020

Bug fix in pythonpath
e55ad43b118d
·richart on Jan 24 2020, 16:39.

Jan 23 2020

Correcting install directory for old cmake versions
351de5cb04ec
·richart on Jan 23 2020, 18:19.
Installing python binding and akantu-iterators properly
8b12a8c50daf
·richart on Jan 23 2020, 18:07.

Jan 22 2020

improving the install process
4a17d216cedb
·richart on Jan 22 2020, 18:29.
Merge branch 'master' into 'master'
6f65103bbed2
·richart on Jan 22 2020, 15:02.
fix compilation error for c++17 standard
01e5634d792c
·anciaux on Jan 22 2020, 14:50.

Jan 15 2020

Actually running the examples as tests
f7fc4feca70a
·richart on Jan 15 2020, 18:06.
make the new_material a bit faster
eb1c624aba2f
·richart on Jan 15 2020, 13:26.
factorizing scatter/gather from dof_synchronizer to synchronizer_impl
72bc1b60d6fa
·richart on Jan 15 2020, 13:24.

Jan 10 2020

adding detection of the mpiseq library
658b6fd7fa88
·richart on Jan 10 2020, 13:27.
tuple concat trick
b72970096de0
·richart on Jan 10 2020, 13:19.

Dec 20 2019

Seting policy for the <package>_ROOT variable in the environment
cdbd6f96b11e
·richart on Dec 20 2019, 14:22.
Wrongly protected compilation
3741ee66d19a
·richart on Dec 20 2019, 14:14.

Dec 18 2019

Bug fix in the export of the target akantu
38689942d5bb
·richart on Dec 18 2019, 14:45.

Dec 13 2019

mpi skip mpicxx
668db21aecb0
·richart on Dec 13 2019, 15:51.
extanding SparseMatrix and DOFManager interface in python
0ff570ffbf37
·richart on Dec 13 2019, 15:33.
Make the test work with older version of gtest
ffa47eb473d7
·richart on Dec 13 2019, 14:45.
cleaning lincences and clang-formating
58c60757d33e
·richart on Dec 13 2019, 11:26.
Merge commit '77f80db265988ff43dd2ab40ac712b0ab8053711'
093c0a728b0e
·richart on Dec 13 2019, 10:46.
A bit to aggressive with the clang-tidy
77f80db26598
·richart on Dec 13 2019, 10:45.

Dec 12 2019

Merge commit '7085e4eba3cb6bdc76ba56c87cd3b686039aefaf'
74233cffde18
·richart on Dec 12 2019, 19:20.
Added named_zip
7085e4eba3cb
·richart on Dec 12 2019, 19:16.
tidied and formated version
507f7dbccbdf
·richart on Dec 12 2019, 15:38.
some cleaning to many class in the same file
3889358d690a
·richart on Dec 12 2019, 13:57.

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History
features/changes-to…8f1d14ec176b31379092b65…