Diffusion akantu (features/changes-to-address-joss-review) History

rAKA/src
features/changes-to…9d1341e08698e17ad914586…

May 10 2022

Merge branch 'bugfixes/create_matrices_if_needed_by_user' into 'master'
9d1341e08698
·tdroch on May 10 2022, 11:05.

May 4 2022

Merge branch 'bugfixes/multiple_small_bug_in_contact_mechanics' into 'master'
d849be145a03
·Lucas Frérot on May 4 2022, 16:54.

May 3 2022

Changing the version from real to int to avoid exact real comparaison
46de087fc5ed
·richart on May 3 2022, 09:16.
extanding python group interface
e7ba0c1c0ee7
·richart on May 3 2022, 09:16.
Setting properly the model type in contact coupler
d95695ca47b4
·richart on May 3 2022, 09:15.
Bu fix in the material selector
16c7f3f5d1ca
·richart on May 3 2022, 09:14.
Creating submodule for debug and cleaning debug code
af35006dbf96
·richart on May 3 2022, 09:13.

Apr 28 2022

Running clang-format for code quality checks
4964c71bb961
·branch: features/structural_mechanics_lumped_mass
·richart on Apr 28 2022, 20:30.
Merge branch 'master' into 'features/structural_mechanics_lumped_mass'
09de0b6e0b49
·richart on Apr 28 2022, 16:30.
Merge branch 'master' into bugfixes/Unexpected-behaviour-in-energy-computation…
4f7245f27871
·richart on Apr 28 2022, 12:45.
Merge branch 'master' into 'features/structural_mechanics_lumped_mass'
7ffe79ae43a2
·richart on Apr 28 2022, 12:16.
Merge branch 'bugfixes/detect_mixed_distributed_initialization' into 'master'
8185a160038c
·richart on Apr 28 2022, 09:55.
Apply 2 suggestion(s) to 2 file(s)
56be2315a654
·branch: bugfixes/create_matrices_if_needed_by_user
·phimuell / richart on Apr 28 2022, 09:29.
Apply 1 suggestion(s) to 1 file(s)
96dbd1c1c33c
·branch: bugfixes/detect_mixed_distributed_initialization
·richart / phimuell on Apr 28 2022, 07:20.

Apr 27 2022

Giving access to alpha and beta in NewmarkBeta
f6df60ddf7b7
·richart on Apr 27 2022, 17:34.
Merge branch 'master' into bugfixes/create_matrices_if_needed_by_user
c5fb4eb8f6a9
·richart on Apr 27 2022, 16:24.
Making K optional in Newmark-beta for explicit with consistent mass computations
792f29f6d28d
·richart on Apr 27 2022, 11:48.
Run the clang formater.
b5b10351b368
·Philip Mueller, HS on Apr 27 2022, 10:48.
Removed an accessor that is no longer needed.
eaec5d10f288
·Philip Mueller, HS on Apr 27 2022, 10:45.
Fixed a bug.
b64239f821f0
·Philip Mueller, HS on Apr 27 2022, 10:13.
Apply 1 suggestion(s) to 1 file(s)
570532b271ab
·richart / phimuell on Apr 27 2022, 10:06.
Applied more of Nicolas' suggestions.
3db0cf5502c7
·Philip Mueller, HS on Apr 27 2022, 09:59.
Apply 1 suggestion(s) to 1 file(s)
78946eebbd37
·richart / phimuell on Apr 27 2022, 09:46.
Addessed several of Nicolas' comments on GitLab.
678ec54b220c
·Philip Mueller, HS on Apr 27 2022, 09:03.
Apply 1 suggestion(s) to 1 file(s)
ab8a70eff592
·richart / phimuell on Apr 27 2022, 08:02.
Apply 1 suggestion(s) to 1 file(s)
cc6ad0f52582
·richart / phimuell on Apr 27 2022, 08:02.
Apply 1 suggestion(s) to 1 file(s)
a015367b0b7c
·richart / phimuell on Apr 27 2022, 08:02.
Apply 1 suggestion(s) to 1 file(s)
8c8f962ac1c3
·richart / phimuell on Apr 27 2022, 07:57.
Apply 1 suggestion(s) to 1 file(s)
73f4016ec514
·richart / phimuell on Apr 27 2022, 07:56.

Mar 31 2022

Added an alias function for the lumped mass to the structural model.
9890e5b3d6c9
·Philip Mueller, HS on Mar 31 2022, 07:58.
Removed some old functions of mine, that prevented the compilation.
9649c6fd2684
·Philip Mueller, HS on Mar 31 2022, 07:58.

Mar 30 2022

Merge branch 'bugfixes/65-Making-the-integrators-available-in-Python' into…
b6dbd90d648e
·Philip Mueller, HS on Mar 30 2022, 12:53.
This commit fixes a bug in the `assembleResidual()` function of the…
de452cb795f1
·Philip Mueller, HS on Mar 30 2022, 10:06.
Updated the implementation of the kinetic energy computation in the solid…
45847f50eb7d
·Philip Mueller, HS on Mar 30 2022, 09:53.
Updated the implementation of the `StructuralMechanicsModel::getKineticEnergy…
b7c85dd2bf05
·Philip Mueller, HS on Mar 30 2022, 09:51.

Mar 25 2022

The structural part now also have the solvers of the continuum.
596a07bedb2d
·Philip Mueller on Mar 25 2022, 16:33.
Fixed a bug in the lumped mass implementation of the structural part.
72e56f3888d3
·Philip Mueller on Mar 25 2022, 16:30.

Mar 24 2022

Fixed a typo.
4a883eb2a210
·phimuell on Mar 24 2022, 07:31.
Removed a misleading comment.
0c52d49647c8
·phimuell on Mar 24 2022, 07:23.

Mar 23 2022

Fixed a bug in the `assembleResidual()` function of the structural mechanics…
1531328d5dcb
·Philip Mueller on Mar 23 2022, 09:06.

Mar 22 2022

Updates the `assembleResidual()` functions of the `StructuralMechanicsModel`.
29b90b0f220d
·Philip Mueller, HS on Mar 22 2022, 13:52.
Updated the behaviour of the `getPotentialEnergy()` and `getKineticEnergy()`…
7be0c4621be1
·Philip Mueller, HS on Mar 22 2022, 13:48.

Mar 20 2022

Updated the `DOFManager`, regarding the new event `MeshIsDistributedEvent`.
f01a71ed88a5
·Philip Mueller, HS on Mar 20 2022, 16:48.
Added a new mesh event for the case when the `Mesh` is set to be distributed.
aaed29043102
·Philip Mueller, HS on Mar 20 2022, 16:48.

Mar 18 2022

Making IntegratorScheme available in python
7c8e3eb1d349
·richart on Mar 18 2022, 16:04.
Missing matrix type
809d12911433
·richart on Mar 18 2022, 10:58.
Create the M and K matrices if the assembly function is called directly by the…
b592be01af06
·richart on Mar 18 2022, 10:55.

Mar 15 2022

Added a check to the `initFullImpl()` function of the `Model` to check the…
0dbef4831570
·Philip Mueller, HS on Mar 15 2022, 07:46.
Updated the `SolverVector` Interface.
a1120eb7be62
·Philip Mueller, HS on Mar 15 2022, 07:43.

Mar 14 2022

Removing debug code
3fbdb1c1064d
·richart on Mar 14 2022, 11:26.

Mar 9 2022

`constepr pi` does not compile on clang
b8bf04d15d77
·richart on Mar 9 2022, 15:40.
Missing override
28e453375af1
·richart on Mar 9 2022, 13:37.

Mar 8 2022

Aligning the code with akantu coding conventions
547c4e3b1cbd
·richart on Mar 8 2022, 22:35.

Feb 25 2022

Compiler are sop picky.
d6cbb7a4852c
·Philip Mueller on Feb 25 2022, 16:21.
Fixed an error in the `isFinite()` implementation of `SolverVector`.
20ecde97aa7a
·Philip Mueller on Feb 25 2022, 13:45.
Updated the Akantu Array.
cbfa2ee4faba
·Philip Mueller on Feb 25 2022, 13:27.
Updated the computation of the Bernulli beams.
030b587794b7
·Philip Mueller on Feb 25 2022, 12:58.
The `SparseMatrix` class now supports a function for testing if its entries are…
962960572b97
·Philip Mueller on Feb 25 2022, 12:26.
It is now possible to force the creation of the lumped mass.
dca49f1688f5
·Philip Mueller, HS / Philip Mueller on Feb 25 2022, 12:23.
Implemented a shady way of computing the lumped mass matrix.
e18e82be6b0e
·Philip Mueller, HS / Philip Mueller on Feb 25 2022, 12:22.
Fixed some issues for the array iterator.
aa96d746ff76
·Philip Mueller, HS / Philip Mueller on Feb 25 2022, 12:20.
Updated the description of the function.
01fbff493bec
·Philip Mueller, HS / Philip Mueller on Feb 25 2022, 12:19.
Updaed the structural mechanics model.
fa030cf05453
·Philip Mueller, HS / Philip Mueller on Feb 25 2022, 12:17.

Feb 10 2022

Implemented inflate which does the opposite of flatten
677ca31609cb
·richart on Feb 10 2022, 09:52.
Typo WARN -> WARNING
4d99cf952ec7
·richart on Feb 10 2022, 09:52.
Missing return statement
45ad4bb227b1
·richart on Feb 10 2022, 09:52.
Adding warnings on operator=
bf02562f93cf
·richart on Feb 10 2022, 09:52.
Adding operator= to ElementTypeMapArray
a52962367d43
·richart on Feb 10 2022, 09:52.
adding missing functions to the python interface
8a1376f66a9f
·richart on Feb 10 2022, 09:52.
Material name not set properly when using registerNewMaterial
4807036100eb
·richart on Feb 10 2022, 09:52.

Jan 20 2022

Adding PeriodicSlaves and removing method that returns a unordered_multimap
06016ce80fae
·Nicolas Richart on Jan 20 2022, 16:44.

Dec 23 2021

This makes the CI build the python wheel - on master it pushes the wheel to the…
4d4db01864a7
·richart on Dec 23 2021, 11:40.

Nov 23 2021

Merge branch 'features/terms-to-add-in-python' into 'master'
1c72ce33b004
·branch: bugfixes/32-python-interface-import-akantu-fails-with-4-0-0-problem-in-make-install
·tdroch on Nov 23 2021, 14:28.

Nov 9 2021

Remove pure virtual where not needed
90b20d4c42ee
·Nicolas Richart on Nov 9 2021, 19:21.

Nov 5 2021

Adding missing consts
9fe7ea111967
·richart on Nov 5 2021, 18:10.
Adding a layer InterceptSolverCallback to simplify the interception
174a2e1ab3ac
·richart on Nov 5 2021, 15:04.
Moved dofs ids information to TermsToAssemble
3ad087540b2b
·richart on Nov 5 2021, 11:23.

Oct 22 2021

Merge branch 'features/28-getelementinradius-const-element-element-in-feengine…
adf760250693
·richart on Oct 22 2021, 16:56.
Adding missing parts in the interface and debugging
44aa27ae672e
·Nicolas Richart on Oct 22 2021, 09:08.

Oct 20 2021

Adding TermsToAdd and SolverCallbacks to python interface
1cf5685c9724
·richart on Oct 20 2021, 10:53.

Oct 6 2021

bug fix for the dumper field: now possible again to dump a mesh
6c4aec2225d4
·branch: bugfixes/broken_dumper_nodes
·anciaux on Oct 6 2021, 14:29.

Oct 1 2021

Debuged getElementInradius and added a test
cf25e59e090b
·branch: features/28-getelementinradius-const-element-element-in-feengine-returns-always-0
·richart on Oct 1 2021, 16:08.

Sep 17 2021

Linting the cc files too
d213b95f146f
·branch: features/another-take-at-ci-stuffs
·Nicolas Richart on Sep 17 2021, 10:45.

Sep 16 2021

Some more errors introduced/revealed by the linter
be9997e57239
·richart on Sep 16 2021, 18:20.
Header error discovered by formatting
93ae1ca0ac57
·richart on Sep 16 2021, 17:41.

Sep 15 2021

clang-format everything
e5cfe0ce664a
·Nicolas Richart on Sep 15 2021, 09:27.

Aug 27 2021

clang-tidy --fix: to auto fix errors
25743e8c285f
·richart on Aug 27 2021, 22:58.

Aug 17 2021

Preparing version 4.0.0
a23d4b76944e
·richart on Aug 17 2021, 18:15.

Aug 3 2021

Merge branch 'bugfixes/boundary_changes_in_solver' into 'master'
020d57e328cd
·richart on Aug 3 2021, 12:24.

Jul 28 2021

Code quality corrections
67d8f5cfd95f
·richart on Jul 28 2021, 22:59.
Adding exception when not converged
721e10971f05
·richart on Jul 28 2021, 14:25.
Correction based on @ganciaux review
c8d9385f5ff2
·richart on Jul 28 2021, 14:06.
Resetting the J matrix if the boundary changed
6262bb9b0011
·branch: bugfixes/boundary_changes_in_solver
·richart on Jul 28 2021, 11:17.

Jul 20 2021

Merge branch 'master' into features/contact
251af691556a
·richart on Jul 20 2021, 18:23.

Jul 7 2021

Merge branch 'features/22-problem-in-the-documentation-for-the-viscoelastic…
67a78b03ef1c
·tdroch on Jul 7 2021, 09:43.

Jun 30 2021

Merge branch 'features/material-selector-python' into 'master'
92bb4e260b29
·anciaux on Jun 30 2021, 15:02.

Jun 26 2021

Bug fix following factorization
7d0cc3b36cbd
·richart on Jun 26 2021, 13:56.

Jun 25 2021

Bug fix refixed
7841f146511f
·richart on Jun 25 2021, 17:34.
Missing symbols with clang
88e4bdd1fc1d
·richart on Jun 25 2021, 11:10.

Jun 24 2021

Corrected clang compilation error and linted some part of the contact code
40104a165ba1
·richart on Jun 24 2021, 22:37.