Diffusion akantu (features/changes-to-address-joss-review) History

rAKA/src/synchronizer
features/changes-to…d4f0b60287797b1215bbc71…

Jun 15 2018

Pre-working stage for PBC:
d4f0b6028779
·richart on Jun 15 2018, 11:02.

May 30 2018

Multiple changes in order to start implementation of periodicity
033a8225e32a
·richart on May 30 2018, 14:47.

Apr 17 2018

adding debug info in makePeriodic
ba0d478cf0b3
·richart on Apr 17 2018, 17:53.

Apr 4 2018

NodeType becomes NodeFlags + node_prank
7d530d027fd0
·richart on Apr 4 2018, 17:53.
correction in DynamicCommunicationBuffer
7f933d1c9d7c
·richart on Apr 4 2018, 17:10.
adding a mesh makePeriodic function
ba18e5860efa
·richart on Apr 4 2018, 17:08.
Adding a full blown object to treat bounding boxes
a6ae4099f295
·richart on Apr 4 2018, 17:07.

Mar 14 2018

Bug fix with asynchronous communications
d1c6c42cff98
·richart on Mar 14 2018, 23:25.
Bug fix due to asynchronous communications
d713e84a43b3
·richart on Mar 14 2018, 19:58.
Correcting communications scheme in case of new nodes added
9f259b44ee17
·richart on Mar 14 2018, 19:01.

Mar 13 2018

Minor bug fixes
cc1df18202b9
·richart on Mar 13 2018, 03:30.
Moving the filtering code
cb8a85cba847
·richart on Mar 13 2018, 00:42.

Mar 11 2018

Typo in a node type
f0e158294f0f
·richart on Mar 11 2018, 04:08.

Mar 10 2018

minor enhancing
0557e793fc24
·richart on Mar 10 2018, 18:12.

Mar 8 2018

protecting comm for sanitychecks
9f1cdd776629
·richart on Mar 8 2018, 10:17.
Cleaning useless events
d32942878135
·richart on Mar 8 2018, 03:31.

Mar 6 2018

Adding more sanity checks in communications
809218ac1513
·richart on Mar 6 2018, 21:11.

Mar 4 2018

Updating properly the global nodes to correct the cohesive elements
aaccf2a6c9d4
·richart on Mar 4 2018, 00:26.

Mar 3 2018

Bug fix in the cohesive elements
661fbad816c4
·richart on Mar 3 2018, 04:48.

Mar 2 2018

correcting bugs in cohesive elements
13cbc6ed7037
·richart on Mar 2 2018, 03:01.

Feb 28 2018

Fixing facet_synchronizer at the cost of performances
2a4d01fb028c
·richart on Feb 28 2018, 23:44.
Merge branch 'master' of ssh://c4science.ch/diffusion/AKAPRIV/akantu-private
329078f12b59
·richart on Feb 28 2018, 03:52.
Working on the bug on parallel cohesive element
8cd4f4ca4b48
·richart on Feb 28 2018, 03:50.
fixing non local tests
5eb9857ac522
·richart on Feb 28 2018, 02:44.

Feb 26 2018

Bug fix in the implicit dynamic solver
362877022129
·richart on Feb 26 2018, 00:31.

Feb 23 2018

Rewrote the headers of the files in src
2d7e93b72235
·richart on Feb 23 2018, 22:03.
Linted everything 'arc --lint --erverything'
80101ddd6e28
·richart on Feb 23 2018, 15:42.
missing file
a923907ea06a
·richart on Feb 23 2018, 15:39.
Merge branch 'features/dofs-separation-rewrote'
b5e60f1882e8
·richart on Feb 23 2018, 14:54.
debugging cohesive element tests
689ec00e395b
·richart on Feb 23 2018, 11:35.
Compilation problem with gcc 5
9d1b65edf4f1
·richart on Feb 23 2018, 10:14.

Feb 20 2018

No harsh termination, only exceptions thrown
7064d0e0638c
·richart on Feb 20 2018, 15:34.
correcting parallel cohesive element, still not working state
2462423f9d19
·richart on Feb 20 2018, 02:18.

Feb 8 2018

Dewarningazing the code in release
603ed2ea0adf
·richart on Feb 8 2018, 14:21.

Feb 5 2018

Corrections for the python interface
4eda17d13739
·richart on Feb 5 2018, 00:08.

Feb 4 2018

Updating the swig code for cohesive structural and heat transfer models
0de4dd0d2bbd
·richart on Feb 4 2018, 15:31.

Feb 1 2018

include the python interface modifications: compiles again
4d83e6b07478
·anciaux on Feb 1 2018, 09:21.

Jan 26 2018

Debugging the facet_synchronizer
5177ed079215
·richart on Jan 26 2018, 16:48.

Jan 25 2018

Hardening the code while searching a bug in the parallel version
b2c8fec2b705
·richart on Jan 25 2018, 00:12.

Jan 23 2018

Bug in request handling
6f5652013fda
·richart on Jan 23 2018, 00:01.

Dec 18 2017

Adaptation to be able to compile with gcc 5
6af81b9fd766
·richart on Dec 18 2017, 15:59.

Dec 14 2017

Modified model initilalization
79286ef9af64
·richart on Dec 14 2017, 03:14.

Dec 3 2017

Tidying the code with more clang-tidy
20647fbaefa9
·• arichart on Dec 3 2017, 01:14.

Nov 15 2017

Merge branch 'features/dofs-separation-rewrote' of ssh://c4science.
09e14d695f0b
·frerot on Nov 15 2017, 15:03.
Merge branch 'features/dofs-separation-rewrote' of ssh://c4science.
38321971a389
·frerot on Nov 15 2017, 15:03.
Missing file in the previous commit
591c2a4610e0
·richart on Nov 15 2017, 14:59.
Removed the constness of the Communicator to be able to register event handlers
e673c37968c6
·richart on Nov 15 2017, 14:58.

Nov 14 2017

Correcting some tests
c1c269f95a41
·richart on Nov 14 2017, 20:03.

Nov 10 2017

Adding missing functions in dummy communicator
8c906f6cde22
·richart / lozano on Nov 10 2017, 14:09.

Nov 8 2017

clang-tidy auto-fix second pass for using and auto + performance
98405b386e09
·richart on Nov 8 2017, 18:57.
clang-tidy first pass of auto-fixes
3cb848d814e7
·richart on Nov 8 2017, 02:27.

Nov 7 2017

Integrating parallel cohesive element in master
403f60eeed8a
·richart on Nov 7 2017, 13:56.
Made Element a trivial type + change for gcc5
ddd46197b831
·richart on Nov 7 2017, 13:56.
Refactoring communicator
133a6062c3b5
·richart on Nov 7 2017, 13:56.

Oct 13 2017

Moving parallel cohesive element in the main tree + moving cohesive materials
3fd12b2d3e64
·richart on Oct 13 2017, 17:41.

Sep 19 2017

Corrected non-local manager + made cleanup safer
24e0e7f9b3d3
·richart on Sep 19 2017, 01:33.

Aug 13 2017

Changes getSize to size for compatibility with STL containers
a2a185177344
·richart on Aug 13 2017, 19:05.
Bug fixes + modernization
90231efc4b73
·richart on Aug 13 2017, 01:53.

Aug 11 2017

adding arange similar to numpy.arange
fd0f6180866f
·richart on Aug 11 2017, 02:19.

Aug 9 2017

Dynamic update of mesh + priority list for events
9ffaecefb71a
·richart on Aug 9 2017, 21:04.
Cleaning the mesh insterface + modernization
9d78ebf87276
·richart on Aug 9 2017, 20:54.

Jul 6 2017

Changed initialization of elementtypemaparray
67e65283226f
·richart on Jul 6 2017, 13:31.
Non local refactoring + bug fix in the communications of the weight functions
341103fd512e
·richart on Jul 6 2017, 13:31.

Jun 19 2017

Changing namespace definition
f3288de80211
·richart on Jun 19 2017, 14:16.

Jun 2 2017

Forced c++14 as a standard
298222cbaef9
·richart on Jun 2 2017, 16:58.

Jun 1 2017

Registering the communications
43bae6278ea4
·richart on Jun 1 2017, 13:46.

May 19 2017

Still tracking a bug
848b551583d4
·richart on May 19 2017, 16:34.

May 11 2017

Correcting data distribution test
ca5d409e4ee8
·richart on May 11 2017, 01:16.
Another round of debugging
ca61d1994699
·richart on May 11 2017, 00:50.

Apr 1 2017

Test model solver explicit works in parallel
a59691ac4bb7
·richart on Apr 1 2017, 16:06.
Bug fix in element_synchronizer rewrite
a62caba660ec
·richart on Apr 1 2017, 03:21.

Jan 24 2017

Passing communicators to const StaticCommunicator
0035fcd74950
·richart on Jan 24 2017, 11:40.

Jan 18 2017

Adding pre-assembled terms for coupling matrices + detecting changes in…
0db649cf6d67
·richart on Jan 18 2017, 10:54.

Dec 14 2016

Build profile per types on demand and access to equations numbers needed to…
0f78f3ff18c0
·• arichart on Dec 14 2016, 02:35.

Dec 7 2016

starting to modify the tests for the new API, + bug fixes on autos ans adding…
06e82afebd3a
·richart on Dec 7 2016, 13:55.

Dec 2 2016

Merge branch 'master' into features/dofs-separation-rewrote
1b4820c1db0b
·richart on Dec 2 2016, 17:38.
Rewrote synchronizer interface (need testing)
cafceb59140e
·richart on Dec 2 2016, 17:27.

Aug 6 2016

modifs related to the new test of parallel cohesive element insertion
6897e0f0db58
·fabarras on Aug 6 2016, 14:05.

Apr 25 2016

Merge branch 'master' into dofs-separation-rewrote
e817679d7df6
·richart on Apr 25 2016, 21:17.

Apr 20 2016

Corrected the handling of MPI tags
fcf61d36c7c4
·richart on Apr 20 2016, 20:32.

Apr 13 2016

Added tests and made them work for a model in static linear, dynmic implicit
54d48968a1b6
·richart on Apr 13 2016, 14:21.

Mar 17 2016

Correction due to ediff n in some files...
202c6ec62b8b
·richart on Mar 17 2016, 09:17.
Merge branch 'master' of gitolite-richart:akantu into dofs-separation-rewrote
171d1862ded1
·richart on Mar 17 2016, 00:39.

Mar 16 2016

Change of interface of the communicator
b1e240aae004
·richart on Mar 16 2016, 23:50.

Mar 2 2016

solved memory leaks in static_communicator_mpi and…
8f855bf3fefe
·corrado on Mar 2 2016, 12:04.

Feb 23 2016

modified the test to check the coordinates of the facets barycentre in…
aade5ff089a9
·corrado on Feb 23 2016, 19:02.

Feb 2 2016

Merge branch 'master' into dofs-separation-rewrote
6cd48b3f4371
·richart on Feb 2 2016, 19:38.
Merge branch 'release'
3c4776df5aa0
·richart on Feb 2 2016, 10:54.
minor bugfix in mpi termination
d2ccad3bd2e5
·richart on Feb 2 2016, 10:53.

Feb 1 2016

conflicts resolved
b266e36a8204
·Aurelia Cuba Ramos on Feb 1 2016, 09:21.
modifications to use dummy_communicator for RVEs in FE2 simulations
3be907b09878
·Aurelia Cuba Ramos on Feb 1 2016, 08:57.

Jan 31 2016

give unique memory ids to all the elment type maps, needed for FE2
13dd560ae534
·Aurelia Cuba Ramos on Jan 31 2016, 21:39.

Jan 22 2016

updating headers
8b77901c9c9f
·richart on Jan 22 2016, 16:19.
Removing warnings in -pedantic
c66c6897a714
·richart on Jan 22 2016, 15:08.

Jan 21 2016

reformatting+ removing warnings in -pedantic only some -Wvla left
123b4134e86b
·richart on Jan 21 2016, 01:42.
Removing warning with -Wall -Werror + reformating the fils went through
a1b3497b1275
·LSMS Tester / richart on Jan 21 2016, 00:10.

Jan 19 2016

Bug fixes: memory leaks and finalization
569aca0ad4eb
·richart on Jan 19 2016, 23:05.

Jan 15 2016

Updating the headers for the release 2.3
7dd9648d4655
·LSMS Tester / richart on Jan 15 2016, 17:03.

Jan 13 2016

Correction of MPI_Init to be able to use mpi4py
a1ff9a28c2f8
·richart on Jan 13 2016, 15:53.
Revert "fixed mpi problem with akantu"
c937ce36b65b
·richart on Jan 13 2016, 10:47.