Diffusion akantu (features/developer-manual-initial) History

History
features/developer…7b78eda9f30ae4ae28415f5…

Sep 25 2018

Adding the mesh nodal data to the python interface
7b78eda9f30a
·richart on Sep 25 2018, 17:39.

Sep 12 2018

Adding transform adaptor and nodedata in mesh data
023a4b630b0e
·richart on Sep 12 2018, 13:22.

Aug 29 2018

Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
7dc81cfc7ec7
·richart on Aug 29 2018, 14:08.
Adding some functions in the python interface
71beddeb9549
·richart on Aug 29 2018, 14:08.

Aug 15 2018

Expanded the "Compiling your simulation" part of the manual.
a7b87ab7f810
·brink on Aug 15 2018, 15:26.
Sourcing the environment file
cc267756e92b
·richart on Aug 15 2018, 15:11.

Aug 14 2018

modified fe_engine python interface
00b736ea3a6f
·richart on Aug 14 2018, 17:55.
Modified Jenkinsfile to report states
ce27c97d465b
·richart on Aug 14 2018, 17:55.

Aug 10 2018

refactoring fieldTimesShapes in computeNtb
f4dd6b579644
·richart on Aug 10 2018, 16:29.
Few compilation fixes for gcc>=8
ed8607e8f267
·richart on Aug 10 2018, 15:30.

Jun 6 2018

added previous state restore on Material
ce2730d54e3e
·frerot on Jun 6 2018, 11:47.
added restore history to InternalField
0fa983932f3b
·frerot on Jun 6 2018, 11:14.

May 17 2018

Merge branch 'master' of c4science:/diffusion/AKAPRIV/akantu-private
6a2d279265ae
·richart on May 17 2018, 17:04.

May 1 2018

added physical names selector to python interface
cf9971ddd98a
·frerot on May 1 2018, 15:50.
removed import mpi4py from python module
0d46473e9018
·frerot on May 1 2018, 15:50.

Apr 4 2018

adding linters for python
67a1f1d0977b
·richart on Apr 4 2018, 14:09.
Cleaning the Jenkinsfile
0bbad422f5e2
·richart on Apr 4 2018, 11:19.

Apr 3 2018

Allowing to skip test in gtest
c43899c526cc
·richart on Apr 3 2018, 21:11.
Adapting the test driver to handle extra option for test executable
b2b4f9e7a282
·richart on Apr 3 2018, 20:40.
Trying to analyze gtest results separately
e8d2352f1bba
·richart on Apr 3 2018, 16:51.
Switching output to ctest
6c8e80ac80aa
·richart on Apr 3 2018, 16:06.
Syntax error in email notification
958249a79fbf
·richart on Apr 3 2018, 13:53.
More comments problems
14fefaf44446
·richart on Apr 3 2018, 13:39.
Remaining useless comment
d04d2031c1de
·richart on Apr 3 2018, 13:37.
Attempt to make the test pass with mpi in docker
a974cb7fb24c
·richart on Apr 3 2018, 13:33.

Mar 28 2018

mode syntax errors
7c75df790315
·richart on Mar 28 2018, 20:31.
syntax error in Jenkins file
f76a48447125
·richart on Mar 28 2018, 20:24.
Adding tests and notifications to jenkinsfile
a9630d9994cb
·richart on Mar 28 2018, 20:18.
Added Jenkinsfile
74124d83987c
·richart on Mar 28 2018, 19:51.
Merge branch 'master' of ssh://c4science.ch/diffusion/AKAPRIV/akantu-private
7475e6d06223
·gallyamov on Mar 28 2018, 16:00.
Made cohesive intrinsic example work
372dd18148b4
·gallyamov on Mar 28 2018, 15:58.

Mar 27 2018

Adding cleaning to help debug Jenkinsfile
befcbaadef92
·richart on Mar 27 2018, 20:52.
Adding git and handling mpi codes to not fail even in sequential
c753772b83f5
·richart on Mar 27 2018, 20:44.
More minor changes for tests
2dd4a6dc714b
·richart on Mar 27 2018, 19:57.
More missing packages in docker
6307b3c73a73
·richart on Mar 27 2018, 19:29.
Adapting dockerfile according to best practices
3179fe8fda79
·richart on Mar 27 2018, 19:18.
Adding blas in docker and cd build in jenkins
8121b743d7b6
·richart on Mar 27 2018, 19:06.
More tweaking on the Jenkins file
843de98e3fb7
·richart on Mar 27 2018, 18:19.
Adding docker file
8f35967432b4
·richart on Mar 27 2018, 18:15.
typo in Jenkinsfile
6d8484ee0a8e
·richart on Mar 27 2018, 18:02.
Minor changes int the python insterface
2bbc30b8dd4c
·richart on Mar 27 2018, 17:02.
is_extrinic in python
2bcda32fdee4
·richart on Mar 27 2018, 15:23.

Mar 23 2018

Changes docker image
ede2f5e72ff6
·richart on Mar 23 2018, 17:59.
Initial commit of Jenkinsfile
c675c376462d
·richart on Mar 23 2018, 17:52.

Mar 20 2018

give access to solve step of a given solver
6084ccd718c5
·anciaux on Mar 20 2018, 17:36.
make example compile
c4a3de477515
·anciaux on Mar 20 2018, 17:35.

Mar 15 2018

Fixing bug introduced due to change of behavior when mesh distributed in…
29f36af846c5
·richart on Mar 15 2018, 13:08.
Merge branch 'master' of c4science:/diffusion/AKAPRIV/akantu-private
49572d5f5f6b
·richart on Mar 15 2018, 00:50.
Adding info on how to compil a external simu
9f07cdd93b98
·richart on Mar 15 2018, 00:47.
cleaning the code
e28e345c933b
·richart on Mar 15 2018, 00:26.
More correction to install
6708a9d70aaa
·richart on Mar 15 2018, 00:14.
Correcting the make install phase
1a8e8899ec36
·richart on Mar 15 2018, 00:10.

Mar 14 2018

Bug fix with asynchronous communications
d1c6c42cff98
·richart on Mar 14 2018, 23:25.
Sanity check to detect a crappy bug
a2531b4b8718
·richart on Mar 14 2018, 19:58.
Bug fix due to asynchronous communications
d713e84a43b3
·richart on Mar 14 2018, 19:58.
Correcting communications scheme in case of new nodes added
9f259b44ee17
·richart on Mar 14 2018, 19:01.
Bug fix for static computations with cohesive elements
c643c426521c
·richart on Mar 14 2018, 02:44.
Cleaning doc + install files
8d7094396ab7
·richart on Mar 14 2018, 02:43.

Mar 13 2018

Minor bug fixes
cc1df18202b9
·richart on Mar 13 2018, 03:30.
Correcting tests for embeded and improving test cohesive
184ef21a2c0b
·richart on Mar 13 2018, 03:30.
Cleaning getBarycenter
2897202b1f6d
·richart on Mar 13 2018, 03:29.
A bit of cleaning
9714682b1b35
·richart on Mar 13 2018, 00:43.
Cleaning the test for pentahedron
033b29cf9ed6
·richart on Mar 13 2018, 00:42.
Moving the filtering code
cb8a85cba847
·richart on Mar 13 2018, 00:42.
Updating the traction-at-split-node-contact to the new interface
e3b7f3373840
·richart on Mar 13 2018, 00:41.

Mar 11 2018

Bug in pentahedron partitioning
1a2e196d60ef
·richart on Mar 11 2018, 23:51.
Bug fix for element with multiple facet types
d79ba446e769
·richart on Mar 11 2018, 22:21.
Bug fix for cohesive element in sequential
6213adec4933
·richart on Mar 11 2018, 21:19.
bug fix in 1D
fb166d5b3c8f
·richart on Mar 11 2018, 21:06.
Merge branch 'master' of ssh://c4science.ch/diffusion/AKAPRIV/akantu-private
d01e5b0fca1d
·richart on Mar 11 2018, 19:11.
Cleaning warnings when compiling in release
347aaaa4208f
·richart on Mar 11 2018, 19:07.
Cleaning swig warnings at compilation
15fbae074af8
·richart on Mar 11 2018, 19:01.
Fixing bugs introduced will bug fixing cohesive elements in parallel
1b065daef62a
·richart on Mar 11 2018, 18:34.
Updated cohesive element full test
8675d85a9fd1
·richart on Mar 11 2018, 05:34.
Bug fix in cohesive intrinsic parallel + changes in material selection
cf4f38fcd595
·richart on Mar 11 2018, 05:34.
Typo in a node type
f0e158294f0f
·richart on Mar 11 2018, 04:08.
Bug fix in inserter
d94a09928098
·richart on Mar 11 2018, 04:07.
Some more rewriting in mesh_utils
201b55bb0036
·richart on Mar 11 2018, 02:33.
Bug fix in renumbering nodes during cohesive insertion
8017498b23df
·richart on Mar 11 2018, 01:59.

Mar 10 2018

Bug fix in the cohesive element insertion
28d5a660b2e7
·richart on Mar 10 2018, 22:28.
Unitialized memory bug
3a75fa285a83
·richart on Mar 10 2018, 22:28.
minor enhancing
0557e793fc24
·richart on Mar 10 2018, 18:12.
bug fix intregrator gauss
1b32c9ff70d9
·richart on Mar 10 2018, 18:11.
Correcting gtests tests
904cdb0be6fc
·richart on Mar 10 2018, 17:56.

Mar 9 2018

Adding accessor to the solution
0c261bbb3bb7
·richart on Mar 9 2018, 03:44.
Code cleaning
fb83f31407d2
·richart on Mar 9 2018, 03:44.
Bug fix in the integrator Gauss when nodes are added
48c82461b78d
·richart on Mar 9 2018, 03:42.

Mar 8 2018

protecting comm for sanitychecks
9f1cdd776629
·richart on Mar 8 2018, 10:17.
removing useless object
1796f3857af3
·richart on Mar 8 2018, 10:16.
Rewriting some insertion code to try to make it more readable
a72d7223ce53
·richart on Mar 8 2018, 10:16.
moving event handling code for cohesive elements
b23c7f5855ca
·richart on Mar 8 2018, 10:15.
updating the global ids based on the master nodes and local connectivity
20b46107c7f2
·richart on Mar 8 2018, 10:15.
Cleaning the mesh events
336316d7a2a3
·richart on Mar 8 2018, 10:14.
adding helper accessor in the mesh
dcd8550a5b85
·richart on Mar 8 2018, 10:14.
updating petty printer
3caa91e71fc4
·richart on Mar 8 2018, 10:13.
Adding operator distance in vector iterator
a3cd85da9cd9
·richart on Mar 8 2018, 10:12.
Cleaning useless events
d32942878135
·richart on Mar 8 2018, 03:31.

Mar 7 2018

Bug fix in mesh_partition + brooming
49a0ee6695bb
·richart on Mar 7 2018, 04:26.
pretty printers for elementtypemaparray
00f0116d10ac
·richart on Mar 7 2018, 04:26.

Mar 6 2018

Adding more sanity checks in communications
809218ac1513
·richart on Mar 6 2018, 21:11.

Historyfeatures/developer…7b78eda9f30ae4ae28415f5…

Sep 25 2018

Sep 12 2018

Aug 29 2018

Aug 15 2018

Aug 14 2018

Aug 10 2018

Jun 6 2018

May 17 2018

May 1 2018

Apr 4 2018

Apr 3 2018

Mar 28 2018

Mar 27 2018

Mar 23 2018

Mar 20 2018

Mar 15 2018

Mar 14 2018

Mar 13 2018

Mar 11 2018

Mar 10 2018

Mar 9 2018

Mar 8 2018

Mar 7 2018

Mar 6 2018

History
features/developer…7b78eda9f30ae4ae28415f5…