Phriction Projects Wikis Bioimaging And Optics Platform Image Processing OMERO History Version 14 vs 15
Version 14 vs 15
Version 14 vs 15
Edits
Edits
- Edit by romainGuiet, Version 15
- Jun 15 2018 09:54
- Edit by romainGuiet, Version 14
- May 2 2018 14:14
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Content Changes
Content Changes
You'll find here some
= USERs =
Please contact [[ olivier.burri@epfl.ch |Olivier Burri ]] or [[ romain.guiet@epfl.ch | Romain Guiet]].
= Visualize Images =
The EPFL OMERO server can be access at [[ https://omero.epfl.ch/ | https://omero.epfl.ch/ ]] to visualize images
= To upload images =
== Install OMERO.insight==
First, you need to install [[ https://www.openmicroscopy.org/omero/downloads/ | omero client]] compatible with you Operating System (OS), either Windows, Mac OS X, Linux.
After the installation, you can follow the simple steps of this [[ http://help.openmicroscopy.org/importing-data-5.html | tutorial ]] or below.
== START OMERO.insight==
{F7109371}
== Define server adress==
{F7109375}
== Enter your credentials==
// The first time you login, please clic on the locker to close it //
{F7111871}
{F7111889}
== Create Project ==
Select your username and {nav Right-Clic > Create New >New Project ...}
{F7111898}
Specify name and press {key Create}
{F7111919}
Your project is created
{F7111908}
== Create Dataset==
Select a project and {nav Right-Clic > Create New >New Dataset...}
{F7111940}
Specify name and press {key Create}
{F7111951}
Dataset is created
== Import Images ==
Select a dataset and {nav Right-Clic > Import...}
{F7111960}
- Select Images, then Press {key >}
{F7111987}
- Project and Dataset should allready be correct and Press {key Add_to_the_Queue}
{F7112002}
- The list is updated , press {key Import}
{F7112017}
- Images are added to the dataset
{F7112297}
- Slider at the bottom to enlarge images
{F7112309}
- Double-clic on an thumbnail open a new window
{F7112323}
You'll find here some
= USERs =
Please contact [[ olivier.burri@epfl.ch |Olivier Burri ]] or [[ romain.guiet@epfl.ch | Romain Guiet]].
=Crash-Test EPFL =
[[https://c4science.ch/w/bioimaging_and_optics_platform_biop/image-processing/omero/omero-crash-test/ | notes ]
= Visualize Images =
The EPFL OMERO server can be access at [[ https://omero.epfl.ch/ | https://omero.epfl.ch/ ]] to visualize images
= To upload images =
== Install OMERO.insight==
First, you need to install [[ https://www.openmicroscopy.org/omero/downloads/ | omero client]] compatible with you Operating System (OS), either Windows, Mac OS X, Linux.
After the installation, you can follow the simple steps of this [[ http://help.openmicroscopy.org/importing-data-5.html | tutorial ]] or below.
== START OMERO.insight==
{F7109371}
== Define server adress==
{F7109375}
== Enter your credentials==
// The first time you login, please clic on the locker to close it //
{F7111871}
{F7111889}
== Create Project ==
Select your username and {nav Right-Clic > Create New >New Project ...}
{F7111898}
Specify name and press {key Create}
{F7111919}
Your project is created
{F7111908}
== Create Dataset==
Select a project and {nav Right-Clic > Create New >New Dataset...}
{F7111940}
Specify name and press {key Create}
{F7111951}
Dataset is created
== Import Images ==
Select a dataset and {nav Right-Clic > Import...}
{F7111960}
- Select Images, then Press {key >}
{F7111987}
- Project and Dataset should allready be correct and Press {key Add_to_the_Queue}
{F7112002}
- The list is updated , press {key Import}
{F7112017}
- Images are added to the dataset
{F7112297}
- Slider at the bottom to enlarge images
{F7112309}
- Double-clic on an thumbnail open a new window
{F7112323}
You'll find here some
= USERs =
Please contact [[ olivier.burri@epfl.ch |Olivier Burri ]] or [[ romain.guiet@epfl.ch | Romain Guiet]].
=Crash-Test EPFL =
[[https://c4science.ch/w/bioimaging_and_optics_platform_biop/image-processing/omero/omero-crash-test/ | notes ]
= Visualize Images =
The EPFL OMERO server can be access at [[ https://omero.epfl.ch/ | https://omero.epfl.ch/ ]] to visualize images
= To upload images =
== Install OMERO.insight==
First, you need to install [[ https://www.openmicroscopy.org/omero/downloads/ | omero client]] compatible with you Operating System (OS), either Windows, Mac OS X, Linux.
After the installation, you can follow the simple steps of this [[ http://help.openmicroscopy.org/importing-data-5.html | tutorial ]] or below.
== START OMERO.insight==
{F7109371}
== Define server adress==
{F7109375}
== Enter your credentials==
// The first time you login, please clic on the locker to close it //
{F7111871}
{F7111889}
== Create Project ==
Select your username and {nav Right-Clic > Create New >New Project ...}
{F7111898}
Specify name and press {key Create}
{F7111919}
Your project is created
{F7111908}
== Create Dataset==
Select a project and {nav Right-Clic > Create New >New Dataset...}
{F7111940}
Specify name and press {key Create}
{F7111951}
Dataset is created
== Import Images ==
Select a dataset and {nav Right-Clic > Import...}
{F7111960}
- Select Images, then Press {key >}
{F7111987}
- Project and Dataset should allready be correct and Press {key Add_to_the_Queue}
{F7112002}
- The list is updated , press {key Import}
{F7112017}
- Images are added to the dataset
{F7112297}
- Slider at the bottom to enlarge images
{F7112309}
- Double-clic on an thumbnail open a new window
{F7112323}
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