Diffusion akantu f43c94d839a1

Merge branch 'master' into dofs-separation-rewrote
f43c94d839a1
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Authored by richart on Aug 18 2015, 15:52.

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Merge branch 'master' into dofs-separation-rewrote

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richart

Aug 18 2015, 15:52

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richart	Dec 6 2019, 13:35
richart	Dec 6 2019, 13:16
richart	Dec 6 2019, 12:16
richart	Dec 6 2019, 11:45
richart	Dec 5 2019, 22:54
richart	Dec 5 2019, 18:45

Parents

rAKA128c0520c87c: Begining of implementation of DOFManager as a central object for solver +…
rAKA16d6e7aa32ce: Started advanced dumper section for user manual (ticket #59)

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richart committed rAKAf43c94d839a1: Merge branch 'master' into dofs-separation-rewrote (authored by richart).Aug 18 2015, 15:52

Merged Changes

Commit	Author	Details	Committed
16d6e7aa32ce	richart	Started advanced dumper section for user manual (ticket #59)	Aug 10 2015
70fa1c247f46	richart	Bug fix on CMake code, concat does not exists before 3.0	Aug 8 2015
cea2d4828c56	richart	Merge branch 'master' of lsmssrv1.epfl.ch:akantu	Aug 8 2015
4ba0541fcf79	richart	INTEREST_LIST generated in cmake (ticket #68)	Aug 8 2015
9f000c0ac5db	richart	refining mpi compile flags handling	Aug 8 2015
a675bb0ab426	fabarras	Merge branch 'master' of lsmssrv1.epfl.ch:akantu	Aug 7 2015
f332b2421734	fabarras	test + doc of cohesive elements insertion along physical surfaces	Aug 7 2015
21ce0527e9b2	anciaux	make the init for the solver reentrant	Aug 7 2015
2bff9da7343d	fabarras	insertion of intrinsic cohesive elements along physical surfaces + change of…	Aug 6 2015
db7a92057d33	anciaux	Merge branch 'master' of gitolite:akantu	Aug 5 2015
60551555c624	anciaux	correct another memory leak	Aug 5 2015
bf1f2c2bac15	richart	Merge branch 'master' of lsmssrv1.epfl.ch:akantu	Aug 4 2015
4bee089d6542	richart	Modification to make akantu compile with long int (64bit idx) Still has to…	Aug 4 2015
66aebf94f133	anciaux	freeing solver for heattransfermodel	Aug 4 2015
4cfea41bf633	richart	Bug fix for python	Aug 4 2015
2b41c6049562	richart	Fix for files that are only in a branch for now	Aug 4 2015
d8d4b8982704	richart	Merge branch 'master' of lsmssrv1.epfl.ch:akantu	Aug 4 2015
88ec5e44af0b	richart	Modifications to be able to compile akantu in float	Aug 4 2015
7096a8ee1288	richart	removed warning for missing _point_1.msh	Aug 4 2015
a4fcb7a89308	anciaux	automatic conversion and check of numpy/Akantu arrays	Aug 3 2015
8a136b183f21	richart	Merge branch 'master' of lsmssrv1.epfl.ch:akantu	Aug 3 2015
a847f8befd96	richart	reactivated the compilation of examples with chenger of package system	Aug 3 2015
4ee09abbe88d	anciaux	Merge branch 'master' of gitolite:akantu	Aug 3 2015
09cf306d8802	anciaux	splitting in several files the swig warppers	Aug 3 2015
47c6b20d5c70	Clement Roux	test_local_material is now actually testing the damage model	Jul 31 2015
f02a49090f3d	Clement Roux	AKANTU review, ticket 51	Jul 30 2015
7d9124f4097e	anciaux	forcing version 3 of swig	Jul 24 2015
8bf24b72b2d9	anciaux	fix compilation error	Jul 23 2015
087d7e771c84	anciaux	Merge branch 'master' of gitolite:akantu	Jul 23 2015
fe55d8ba0934	anciaux	improving python interface to iterate csr	Jul 23 2015
c3702d2464e1	Lucas Frérot	separation for test_segment_intersection_*	Jul 22 2015
13659b265c30	Lucas Frérot	fixed bug in MeshSphereIntersector	Jul 22 2015
571e9e349498	Lucas Frérot	non const mesh in geometry module + cleanup + performance of compareSegments	Jul 22 2015
1776da21a721	anciaux	fix the initPBC of heat transfer model	Jul 21 2015
f8b881f6c275	anciaux	add the synchronizer to python	Jul 21 2015
7d2223d91ea9	anciaux	extend resize for temp Array for python and allow setmodetext to models	Jul 21 2015
58763ce8bf48	anciaux	extend resize for temp Array for python	Jul 21 2015
c62fef079db6	anciaux	remove useless log	Jul 21 2015
ee7949aecd03	anciaux	prevent swig compilation with c++11: temporary ?	Jul 21 2015
97791428f8e0	anciaux	passing the correct flags to swig	Jul 21 2015

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		Path
M		CMakeLists.txt
M		cmake/AkantuMacros.cmake
M		cmake/AkantuPackagesSystem.cmake
M		cmake/AkantuTestAndExamples.cmake
M		cmake/Modules/CMakePackagesSystem.cmake
M		doc/manual/manual-appendix-materials-cohesive.tex
M		doc/manual/manual-appendix-materials.tex
M		doc/manual/manual-bibliography.bib
M		doc/manual/manual-cohesive_elements_insertion.tex
M		doc/manual/manual-io.tex
M		doc/manual/manual-solidmechanicsmodel.tex
M		examples/explicit/explicit_dynamic.cc
M		examples/new_material/new_local_material.cc
M	(sub)	extra_packages/parallel-cohesive-element
M	(sub)	extra_packages/traction-at-split-node-contact
M		packages/cohesive_element.cmake
M		packages/core.cmake
M		packages/mpi.cmake
M		packages/scotch.cmake
M		python/CMakeLists.txt
M		python/swig/aka_array.i
M		python/swig/aka_common.i
A		python/swig/aka_csr.i
M		python/swig/akantu.i
M		python/swig/mesh.i
M		python/swig/mesh_utils.i
M		python/swig/model.i
M		src/CMakeLists.txt
M		src/common/aka_array.hh
M		src/common/aka_common.cc
M		src/common/aka_common.hh
M		src/common/aka_common_inline_impl.cc
M		src/common/aka_config.hh.in
M		src/common/aka_element_classes_info.hh.in
M		src/common/aka_error.cc
M		src/common/aka_math_tmpl.hh
M		src/fe_engine/fe_engine_template_tmpl.hh
M		src/geometry/geom_helper_functions.hh
M		src/geometry/mesh_abstract_intersector.hh
M		src/geometry/mesh_abstract_intersector_tmpl.hh
M		src/geometry/mesh_geom_abstract.cc
M		src/geometry/mesh_geom_abstract.hh
M		src/geometry/mesh_geom_factory.hh
M		src/geometry/mesh_geom_factory_tmpl.hh
M		src/geometry/mesh_geom_intersector.hh
M		src/geometry/mesh_geom_intersector_tmpl.hh
M		src/geometry/mesh_segment_intersector.hh
M		src/geometry/mesh_segment_intersector_tmpl.hh
M		src/geometry/mesh_sphere_intersector.hh
M		src/geometry/mesh_sphere_intersector_tmpl.hh
M		src/io/dumper/dumpable.cc
M		src/io/dumper/dumpable_iohelper.hh
M		src/mesh/element_group.cc
M		src/mesh/group_manager.cc
M		src/mesh_utils/cohesive_element_inserter.cc
M		src/mesh_utils/cohesive_element_inserter.hh
M		src/mesh_utils/mesh_utils.hh
M		src/model/heat_transfer/heat_transfer_model.cc
M		src/model/model.cc
M		src/model/model.hh
M		src/model/solid_mechanics/embedded_interface_intersector.cc
M		src/model/solid_mechanics/embedded_interface_intersector.hh
M		src/model/solid_mechanics/material.cc
M		src/model/solid_mechanics/materials/internal_field_tmpl.hh
M		src/model/solid_mechanics/materials/material_cohesive/constitutive_laws/material_cohesive_bilinear.cc
M		src/model/solid_mechanics/materials/material_cohesive/constitutive_laws/material_cohesive_exponential.cc
M		src/model/solid_mechanics/materials/material_cohesive/constitutive_laws/material_cohesive_linear.cc
M		src/model/solid_mechanics/materials/material_cohesive/constitutive_laws/material_cohesive_linear_fatigue.cc
M		src/model/solid_mechanics/materials/material_cohesive/constitutive_laws/material_cohesive_linear_inline_impl.cc
M		src/model/solid_mechanics/materials/material_cohesive/material_cohesive.cc
M		src/model/solid_mechanics/materials/material_damage/material_marigo.cc
M		src/model/solid_mechanics/materials/material_damage/material_marigo_inline_impl.cc
M		src/model/solid_mechanics/materials/material_damage/material_mazars.cc
M		src/model/solid_mechanics/materials/material_damage/material_mazars_inline_impl.cc
M		src/model/solid_mechanics/materials/material_elastic_linear_anisotropic.cc
M		src/model/solid_mechanics/materials/material_elastic_orthotropic.cc
M		src/model/solid_mechanics/materials/material_finite_deformation/material_neohookean.cc
M		src/model/solid_mechanics/materials/material_plastic/material_plastic.cc
M		src/model/solid_mechanics/materials/material_thermal.cc
M		src/model/solid_mechanics/materials/material_viscoelastic/material_standard_linear_solid_deviatoric.cc
M		src/model/solid_mechanics/solid_mechanics_model.cc
M		src/model/solid_mechanics/solid_mechanics_model.hh
M		src/model/solid_mechanics/solid_mechanics_model_cohesive.cc
M		src/model/solid_mechanics/solid_mechanics_model_cohesive.hh
M		src/model/solid_mechanics/solid_mechanics_model_inline_impl.cc
M		src/solver/petsc_matrix.cc
M		src/solver/static_solver.cc
M		src/synchronizer/dof_synchronizer.cc
M		src/synchronizer/mpi_type_wrapper.hh
M		src/synchronizer/static_communicator.hh
M		src/synchronizer/static_communicator_dummy.hh
M		src/synchronizer/static_communicator_inline_impl.hh
M		src/synchronizer/static_communicator_mpi.cc
M		src/synchronizer/static_communicator_mpi.hh
M		test/test_common/test_grid.cc
M		test/test_fe_engine/CMakeLists.txt
M		test/test_geometry/CMakeLists.txt
V		test/test_geometry/{test_geometry_intersection_tetrahedron_4.cc → test_segment_intersection_tetrahedron_4.cc}
V		test/test_geometry/{test_geometry_intersection_triangle_3.cc → test_segment_intersection_triangle_3.cc}
V		test/test_geometry/{test_segment_intersection_tetrahedron_4.cc ← test_geometry_intersection_tetrahedron_4.cc}
V		test/test_geometry/{test_segment_intersection_triangle_3.cc ← test_geometry_intersection_triangle_3.cc}
M		test/test_model/test_solid_mechanics_model/patch_tests/colone_weight.cc
M		test/test_model/test_solid_mechanics_model/patch_tests/data/material_anisotropic.dat
M		test/test_model/test_solid_mechanics_model/patch_tests/explicit/patch_test_explicit.cc
M		test/test_model/test_solid_mechanics_model/patch_tests/explicit/patch_test_explicit_anisotropic.cc
P		test/test_model/test_solid_mechanics_model/test_cohesive/CMakeLists.txt Copied to test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_insertion/CMakeLists.txt
M		test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_extrinsic/material.dat
A	(dir)	test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_insertion/
A		test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_insertion/3d_spherical_inclusion.geo
P		test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_insertion/CMakeLists.txt Copied from test/test_model/test_solid_mechanics_model/test_cohesive/CMakeLists.txt
A		test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_insertion/input_file.dat
A		test/test_model/test_solid_mechanics_model/test_cohesive/test_cohesive_insertion/test_cohesive_insertion_along_physical_surfaces.cc
M		test/test_model/test_solid_mechanics_model/test_materials/CMakeLists.txt
M		test/test_model/test_solid_mechanics_model/test_materials/material.dat
A		test/test_model/test_solid_mechanics_model/test_materials/mesh_section_gap.geo
M		test/test_model/test_solid_mechanics_model/test_materials/test_local_material.cc
M		test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_bar_traction2d.cc
M		test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_bar_traction2d_parallel.cc
M		test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_bar_traction2d_structured.cc
M		test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_bar_traction2d_structured_pbc.cc
M		test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_circle_2.cc
M		test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_cube3d.cc
M		test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_cube3d_pbc.cc
M		test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_cube3d_tetra10.cc
M		test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_orthotropic.cc
M		test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_segment_parallel.cc
M		test/test_model/test_solid_mechanics_model/test_solid_mechanics_model_square.cc
M		third-party/cmake/scotch.cmake
M		third-party/scotch_5.1.12b_make.inc.cmake