Diffusion lammps 13ce1037f23d

Version 18 Oct 2016
13ce1037f23d
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Authored by Axel Kohlmeyer <akohlmey@gmail.com> on Oct 18 2016, 21:46.

Description

Version 18 Oct 2016

Details

Committed

Axel Kohlmeyer <akohlmey@gmail.com>

Oct 18 2016, 21:46

Pushed

junge

Oct 19 2017, 09:53

Parents

rLAMMPSfa984b2c3bbd: Version 13 Oct 2016
rLAMMPS2106dce2b382: new fix halt command, other sundry small bug fixes

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Event Timeline

Axel Kohlmeyer <akohlmey@gmail.com> committed rLAMMPS13ce1037f23d: Version 18 Oct 2016 (authored by Axel Kohlmeyer <akohlmey@gmail.com>).Oct 18 2016, 21:46

Merged Changes

Commit	Author	Details	Committed
2106dce2b382	Steve Plimpton	new fix halt command, other sundry small bug fixes	Oct 18 2016
713b2af067cb	sjplimp/GitHub	Merge pull request #221 from akohlmey/collected-bugfixes	Oct 18 2016
a752966eefec	Axel Kohlmeyer	Merge branch 'collected-bugfixes' of github.com:akohlmey/lammps into collected…	Oct 18 2016
1f7693faf289	Axel Kohlmeyer	fix typo	Oct 18 2016
2c5ea9fc61e4	Axel Kohlmeyer	reapply changes to the timer class that got lost somehow	Oct 18 2016
3e88fb535547	Axel Kohlmeyer	Merge branch 'master' into collected-bugfixes	Oct 18 2016
6eadd45c4567	Steve Plimpton	Merge branch 'halt2'	Oct 18 2016
003581c6a80c	Steve Plimpton	final changes to fix halt	Oct 18 2016
1f1c87235a07	Axel Kohlmeyer	add support for "error continue" option, which resets the timer timeout setting…	Oct 18 2016
394c3bb50453	Axel Kohlmeyer	add Timer::reset_timeout() API, that allows restoring the previous timeout…	Oct 18 2016
954d536826ee	Steve Plimpton	added bondmax method to fix halt	Oct 18 2016
e4ff8128f1b2	Axel Kohlmeyer	fix typo	Oct 16 2016
e7825ba21a0b	Axel Kohlmeyer	import fix halt prototype code with corrections for soft exit	Oct 15 2016
e77e1f6b8ea6	Axel Kohlmeyer	replace complex solution to implement a soft exit with simpler one	Oct 15 2016
909ec2c09658	Axel Kohlmeyer	remove unused class members	Oct 14 2016
f67975fd8adf	Axel Kohlmeyer	apply proper initialization and remove redundant variable declaration	Oct 14 2016
deceb9d5c6a4	Axel Kohlmeyer	remove assignment without effect	Oct 14 2016
c9c66ca0bd1a	Axel Kohlmeyer	replace unsafe code	Oct 14 2016
d07703efff5c	Axel Kohlmeyer	re-apply bugfix from two years ago	Oct 14 2016
411ecca8df96	Axel Kohlmeyer	plug memory leak	Oct 14 2016

Changes (53)

				Path
	M			doc/src/Manual.txt
	M			doc/src/Section_commands.txt
	M			doc/src/dump_modify.txt
	A			doc/src/fix_halt.txt
	M			doc/src/fix_temp_rescale.txt
	M			doc/src/minimize.txt
	M			doc/src/run.txt
	A			examples/DIFFUSE/log.13Oct16.msd.2d.g++.8
	A			examples/DIFFUSE/log.13Oct16.vacf.2d.g++.8
	D			examples/DIFFUSE/log.1Feb14.msd.2d.g++.8
	D			examples/DIFFUSE/log.1Feb14.vacf.2d.g++.8
	V			examples/KAPPA/{log.13Oct16.ehex.g++.8 ← log.7Jun16.ehex.g++.8}
	V			examples/KAPPA/{log.13Oct16.heat.g++.8 ← log.7Jun16.heat.g++.8}
	A			examples/KAPPA/log.13Oct16.heatflux.g++.8
	A			examples/KAPPA/log.13Oct16.langevin.g++.8
	A			examples/KAPPA/log.13Oct16.mp.g++.8
	D			examples/KAPPA/log.1Feb14.heatflux.g++.8
	D			examples/KAPPA/log.1Feb14.langevin.g++.8
	D			examples/KAPPA/log.1Feb14.mp.g++.8
	V			examples/KAPPA/{log.7Jun16.ehex.g++.8 → log.13Oct16.ehex.g++.8}
	V			examples/KAPPA/{log.7Jun16.heat.g++.8 → log.13Oct16.heat.g++.8}
	V			examples/MC/{log.13Oct16.mc.g++.1 ← log.6Jun14.mc.g++.1}
	V			examples/MC/{log.6Jun14.mc.g++.1 → log.13Oct16.mc.g++.1}
	A			examples/VISCOSITY/log.13Oct16.einstein.2d.g++.1
	A			examples/VISCOSITY/log.13Oct16.gk.2d.g++.1
	A			examples/VISCOSITY/log.13Oct16.mp.2d.g++.1
	A			examples/VISCOSITY/log.13Oct16.nemd.2d.g++.1
	A			examples/VISCOSITY/log.13Oct16.wall.2d.g++.1
	D			examples/VISCOSITY/log.1Feb14.gk.2d.g++.1
	D			examples/VISCOSITY/log.1Feb14.mp.2d.g++.1
	D			examples/VISCOSITY/log.1Feb14.nemd.2d.g++.1
	D			examples/VISCOSITY/log.1Feb14.wall.2d.g++.1
	A			examples/VISCOSITY/profile.13Oct16.einstein.2d.g++.1
	A			examples/VISCOSITY/profile.13Oct16.gk.2d.g++.1
	A			examples/VISCOSITY/profile.13Oct16.mp.2d.g++.1
	A			examples/VISCOSITY/profile.13Oct16.nemd.2d.g++.1
	A			examples/VISCOSITY/profile.13Oct16.wall.2d.g++.1
	D			examples/VISCOSITY/profile.1Feb14.gk.2d.g++.1
	D			examples/VISCOSITY/profile.1Feb14.mp.2d.g++.1
	D			examples/VISCOSITY/profile.1Feb14.nemd.2d.g++.1
	D			examples/VISCOSITY/profile.1Feb14.wall.2d.g++.1
	M			python/lammps.py
	M			src/GRANULAR/fix_wall_gran_region.cpp
	P			src/USER-DPD/fix_dpd_energy.h Copied to src/fix_halt.h
	M			src/dump_custom.cpp
	M			src/finish.cpp
	A			src/fix_halt.cpp
	P			src/fix_halt.h Copied from src/USER-DPD/fix_dpd_energy.h
	M			src/region_cone.cpp
	M			src/region_cylinder.cpp
	M			src/timer.cpp
	M			src/timer.h
	M			src/version.h