Homec4science

Merge branch 'master' into github-tutorial-update

Authored by Stefan Paquay <stefanpaquay@gmail.com> on Jan 9 2017, 14:38.

Description

Merge branch 'master' into github-tutorial-update

Details

Committed
Stefan Paquay <stefanpaquay@gmail.com>Jan 9 2017, 14:38
Pushed
jungeOct 19 2017, 09:53
Parents
rLAMMPSccd09e39676e: Updated images of succesful merge.
rLAMMPS51fa33a407c7: patch 6Jan17
Branches
Unknown
Tags
Unknown

Event Timeline

Stefan Paquay <stefanpaquay@gmail.com> committed rLAMMPS20f8a8c219a7: Merge branch 'master' into github-tutorial-update (authored by Stefan Paquay <stefanpaquay@gmail.com>).Jan 9 2017, 14:38

Merged Changes

This commit merges a very large number of changes. Only the first 50 are shown.
CommitAuthorDetailsCommitted
51fa33a407c7Steve Plimpton
patch 6Jan17 
Jan 6 2017
142770cb2a69Steve Plimpton
enable pppm/tip4p to work with triclinic 
Jan 6 2017
63f202501b27sjplimp/GitHub
Merge pull request #324 from ibaned/pair-table-kokkos-inherit 
Jan 6 2017
83da5d3b5d6fsjplimp/GitHub
Merge pull request #323 from akohlmey/pppm-cg-triclinic 
Jan 6 2017
ebbf60b1120bsjplimp/GitHub
Merge pull request #319 from andeplane/domain_bug 
Jan 6 2017
12c4fa25e8b1sjplimp/GitHub
Merge pull request #318 from andeplane/initialize_pointers 
Jan 6 2017
3ac58452de6asjplimp/GitHub
Merge pull request #310 from EfremBraun/master 
Jan 6 2017
9b348d567bd6sjplimp/GitHub
Merge pull request #315 from Pakketeretet2/github-tutorial-update 
Jan 6 2017
467377094aadsjplimp/GitHub
Merge pull request #314 from stanmoore1/fix-momentum-kokkos 
Jan 6 2017
5656e90b7882sjplimp/GitHub
Merge pull request #313 from stanmoore1/kokkos_bugfixes 
Jan 6 2017
41a6a3076e17sjplimp/GitHub
Merge pull request #309 from giacomofiorin/colvars-2016-12-22 
Jan 6 2017
d4e8d4738769sjplimp/GitHub
Merge pull request #306 from timattox/USER-DPD_updates 
Jan 6 2017
f6a819580c6bSteve Plimpton
pair TIP4P bug fix for cutoffs >> box size 
Jan 6 2017
9bf771207d7fDan Ibanez
make PairTable::allocate() virtual 
Jan 6 2017
b9144d63325dDan Ibanez
Revert "move enum to pair.h" 
Jan 6 2017
267f05e5ca0cDan Ibanez
protect PairTable dtor with copymode 
Jan 5 2017
aebc8ea82671Dan Ibanez
move enum to pair.h 
Jan 5 2017
53a1de1d4081Dan Ibanez/Dan Ibanez
fix several GPU memory bugs in pair_table_kokkos 
Jan 5 2017
d059b5d3344fDan Ibanez/Dan Ibanez
fix crash in create_kokkos_tables 
Jan 5 2017
7cff343680ceDan Ibanez
fix allocation regressions in PairTableKokkos 
Jan 5 2017
a1ac86108494Dan Ibanez
PairTableKokkos : public PairTable 
Jan 5 2017
17bdb57bb469Dan Ibanez
try PairTableKokkos : public PairTable 
Jan 5 2017
4cfe122ac692Dan Ibanez/Stan Moore
fix warning about enum comparisons 
Jan 4 2017
b46629ee39f2Stan Moore/GitHub
Merge pull request #5 from ibaned/kokkos-fixes 
Jan 4 2017
42bbeb3f16cfAnders Hafreager
NULLing pointers after delete 
Jan 4 2017
a7c5905ca4ecDan Ibanez
prevent implicit dereference of s_CTEMP 
Jan 3 2017
37d5567f6d8bAnders Hafreager
Fixed bug in lamda_box_corners function 
Jan 3 2017
b10d0c17eca3Anders Hafreager
Initializing pointers in neighbor.cpp 
Jan 3 2017
b0ebd3ef4e17Efrem Braun/GitHub
Merge pull request #1 from akohlmey/pull-310 
Dec 28 2016
94c4f8fe5f13Axel Kohlmeyer
add authorship attribution 
Dec 28 2016
aa146e9b383cEfrem Braun
Moved fix_nvk to USER-MISC, updated documentation to reflect move 
Dec 28 2016
eca9539f84f7Stan Moore/Stan Gerald Moore (stamoor)
Disallowing full neighborlist for pair_tersoff_kokkos styles until a bugfix is… 
Dec 28 2016
27172c4a553bStan Moore/Stan Gerald Moore (stamoor)
Fixing Kokkos bug when many atom types 
Dec 28 2016
4f195254af35Stan Moore/Stan Gerald Moore (stamoor)
Fixing bug with Kokkos and reading restart files 
Dec 28 2016
9a0007a13f43Dan Ibanez/Stan Gerald Moore (stamoor)
rename region_block_kokkos inside() 
Dec 28 2016
994f36bc6f8bDan Ibanez/Stan Gerald Moore (stamoor)
silence "implicit dereference" warning 
Dec 28 2016
b3557bfbf50fDan Ibanez/Stan Gerald Moore (stamoor)
add missing return in comm_tiled_kokkos 
Dec 28 2016
371df8ea72d6Dan Ibanez/Stan Gerald Moore (stamoor)
repair sync bugs in fix_momentum_kokkos 
Dec 28 2016
06ae2804f6c2Dan Ibanez/Stan Gerald Moore (stamoor)
ensure velocity is marked as modified before syncing 
Dec 28 2016
68814d4fc818Efrem Braun
Made documentation changes to fix nvk 
Dec 28 2016
616ca1de0345Efrem Braun
Fix nvk implemented. 
Dec 28 2016
b0263e87bbaaGiacomo Fiorin
Fix missing force with extended-Lagrangian mass 
Dec 27 2016
925f42727f32Giacomo Fiorin
Fix typo 
Dec 27 2016
f553e230dbcbGiacomo Fiorin
Update Colvars library to version 2016-12-22 
Dec 27 2016
6ab716164b43Giacomo Fiorin
Fix seg fault for gyration collective variable 
Dec 27 2016
7a45c72b9735Giacomo Fiorin
Allow extended Lagrangian on non-scalar collective variables 
Dec 27 2016
634eb357d2a7Axel Kohlmeyer
synchronize pppm/cg with pppm and remove block on triclinic 
Dec 24 2016
a1036f2d74beTim Mattox
USER-DPD: bugfix for new PairExp6rx::polynomialScaling() function. 
Dec 23 2016
c301d70333a9Tim Mattox
USER-DPD: update example input and output (see commits 3faa57 and eff7238) 
Dec 22 2016
781daad2a02dTim Mattox
USER-DPD: update documentation for changes in commit 3faa57 
Dec 22 2016