Diffusion lammps 883385c8e449

Merge branch 'master' into USER-DPD_kokkos as of patch 17Jan17
883385c8e449
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Authored by Tim Mattox <timothy.mattox@engilitycorp.com> on Jan 17 2017, 19:19.

Description

Merge branch 'master' into USER-DPD_kokkos as of patch 17Jan17

Details

Committed

Tim Mattox <timothy.mattox@engilitycorp.com>

Jan 17 2017, 19:19

Pushed

junge

Oct 19 2017, 09:53

Parents

rLAMMPSe3153e0b3013: Merge pull request #12 from ibaned/pair-table-rx-kokkos
rLAMMPSd2fc88a626e3: patch 17Jan17

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Tim Mattox <timothy.mattox@engilitycorp.com> committed rLAMMPS883385c8e449: Merge branch 'master' into USER-DPD_kokkos as of patch 17Jan17 (authored by Tim Mattox <timothy.mattox@engilitycorp.com>).Jan 17 2017, 19:19

Merged Changes

This commit merges a very large number of changes. Only the first 50 are shown.

Commit	Author	Details	Committed
d2fc88a626e3	Steve Plimpton	patch 17Jan17	Jan 17 2017
c52a26382f89	sjplimp/GitHub	Merge pull request #339 from akohlmey/fixes-for-srp-example	Jan 17 2017
ad4d2999755a	sjplimp/GitHub	Merge pull request #335 from stanmoore1/neighbor_fixes	Jan 17 2017
83408b195fcb	sjplimp/GitHub	Merge pull request #342 from epfl-cosmo/ipi-multiinit-bug	Jan 17 2017
cd7bdf9251b6	sjplimp/GitHub	Merge pull request #341 from stanmoore1/qeq_kk_neighlist	Jan 17 2017
8c5b10890025	sjplimp/GitHub	Merge pull request #340 from stanmoore1/fix_rx_neighborlist	Jan 17 2017
c19d2011bb0f	sjplimp/GitHub	Merge pull request #334 from sstrong99/flow_gauss_changeRef	Jan 17 2017
973bef4d4527	sjplimp/GitHub	Merge pull request #332 from akohlmey/coord-atom-orientorder-atom-enhancements	Jan 17 2017
1b9e50c8cbaa	sjplimp/GitHub	Merge pull request #331 from timattox/USER-DPD_fix_example_typo	Jan 17 2017
252e07e0838f	sjplimp/GitHub	Merge pull request #330 from akohlmey/collected-small-bugfixes	Jan 17 2017
74a661ae264f	sjplimp/GitHub	Merge pull request #328 from akohlmey/print-last-command-on-error	Jan 17 2017
d8bc590aaf1f	sjplimp/GitHub	Merge pull request #327 from stanmoore1/kokkos_lib_update	Jan 17 2017
c9bea60710e6	sjplimp/GitHub	Merge pull request #326 from Pakketeretet2/github-tutorial-update	Jan 17 2017
5cd856c97f97	Steve Plimpton	fix spring doc page update	Jan 17 2017
2f13365cf5f3	Axel Kohlmeyer	avoid spurious error message, when no storage fix is active/used	Jan 16 2017
0a2b78acb877	Axel Kohlmeyer	rather than adjusting the communication cutoff, we just print out the minimum…	Jan 16 2017
3f46b6d7829a	Axel Kohlmeyer	fix bugs from incorrect code synchronization	Jan 16 2017
5abd6e512250	Axel Kohlmeyer	reordering operations in Pair::init_style() to avoid segfaults w/o a kspace…	Jan 16 2017
f3a82f454eea	Michele Ceriotti	Included a flag to prevent multiple open_socket calls if run is included…	Jan 16 2017
473a3ebeeff2	Axel Kohlmeyer	fix for bug with compute rdf with pair reax/c. we must not copy a neighbor list…	Jan 15 2017
b220850377e5	Stan Gerald Moore (stamoor)	Removing neighbor list hack in fix_qeq_reax_kokkos	Jan 15 2017
fa00e0593fc7	Stan Gerald Moore (stamoor)	Make fix_rx request its own neighbor list	Jan 14 2017
4a09399dc64c	Axel Kohlmeyer	during setup, checking timestep doesn't seem to be sufficient. comparing bins…	Jan 14 2017
5821fe8dd563	Axel Kohlmeyer	correct out-of-bounds accesses	Jan 14 2017
98ceb6feb1bf	Axel Kohlmeyer	add missing html files to lammps.book	Jan 14 2017
61cff85435f4	Axel Kohlmeyer	avoid not only division by zero, but also computing variance for short runs…	Jan 13 2017
aa0b327f7e53	Axel Kohlmeyer	Merge branch 'bugfix_dividebyzero' of https://github.com/timattox/lammps_USER…	Jan 13 2017
04fe07196864	Stan Moore/GitHub	Merge pull request #6 from ibaned/cuda-lj-ctor-warning	Jan 13 2017
78498715b49d	Tim Mattox	Protect from divide by zero in mpi_timings() when printing results. e.g. If…	Jan 13 2017
b2f67fea30d1	Axel Kohlmeyer	Merge branch 'collected-small-bugfixes' of github.com:akohlmey/lammps into…	Jan 13 2017
c59bcf31d1c2	Axel Kohlmeyer	change $MKLROOT to $(MKLROOT) as reported by @WeiLiPenguin	Jan 13 2017
2540fc281c4f	Axel Kohlmeyer	Merge branch 'flow_gauss_changeRef' of github.com:sstrong99/lammps into pull-334	Jan 13 2017
e8e03dd44092	Axel Kohlmeyer	Updated the reference for the flow/gauss method, the new reference is much more…	Jan 13 2017
daf766d4f89f	Stan Moore	Fixing Kokkos neighbor bug	Jan 13 2017
630783c8e852	Stan Moore	Fixing neighbor bug	Jan 13 2017
c94030d96631	Dan Ibanez	put pair_lj_coul in kokkos_type.h	Jan 12 2017
1229f6f60b50	Steven Strong	Updated the reference for the flow/gauss method, the new reference is much more…	Jan 12 2017
0b081b0086ad	Axel Kohlmeyer	whitespace cleanup	Jan 12 2017
8e1cf6643c00	Axel Kohlmeyer	apply bugfix to fix wall/gran by eric_lyster@agilent.com on lammps-users	Jan 12 2017
6950a991624e	Axel Kohlmeyer	Revert "remove obsolete warning about fix rigid image flag restrictions"	Jan 12 2017
9f4e5e06616c	Dan Ibanez	fix a CUDA constructor warning	Jan 11 2017
34cb4027df01	Axel Kohlmeyer	make formatting comment consistent	Jan 11 2017
1d0e600ab74b	Axel Kohlmeyer	formatting improvements and small corrections for timer settings and output…	Jan 11 2017
7162cafdf5a5	Stan Moore	Squelching output from Makefile	Jan 10 2017
ee9e7cfbd5e3	Stan Moore	Fixing Kokkos CUDA Makefile issue	Jan 10 2017
7839c335da14	Stan Moore	Fixing compile error with Kokkos CUDA Makefiles	Jan 10 2017
622d9268491d	Axel Kohlmeyer	adapt example inputs for TAD and PRD to the change in compute coord/atom	Jan 10 2017
92d15d4a8931	Axel Kohlmeyer	replace string compare with enums, fix memory leak, formatting cleanup	Jan 10 2017
95706ac846fb	Axel Kohlmeyer	import contributed code for computes coord/atom and orientorder/atom	Jan 10 2017
d06688bb9170	Tim Mattox	USER-DPD: fix a typo in the DPD-H example input; update reference output.	Jan 10 2017

Changes (466)
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This commit is very large. Load each file individually.

		Path
M		doc/src/JPG/tutorial_merged.png
A		doc/src/JPG/tutorial_reverse_pull_request7.png
M		doc/src/Manual.txt
M		doc/src/Section_errors.txt
M		doc/src/Section_packages.txt
M		doc/src/Section_start.txt
M		doc/src/accelerate_kokkos.txt
M		doc/src/commands.txt
M		doc/src/compute_coord_atom.txt
M		doc/src/compute_orientorder_atom.txt
M		doc/src/computes.txt
M		doc/src/fix_flow_gauss.txt
M		doc/src/fix_grem.txt
M		doc/src/fix_spring.txt
M		doc/src/lammps.book
M		doc/src/temper_grem.txt
M		doc/src/timer.txt
M		doc/src/tutorial_github.txt
M		examples/USER/dpd/dpdh-shardlow/in.dpdh-shardlow
M		examples/USER/dpd/dpdh-shardlow/log.dpdh-shardlow.reference
M		examples/USER/misc/basal/in.basal
M		examples/USER/misc/srp/in.srp
M		examples/prd/in.prd
M		examples/tad/in.tad
D		lib/kokkos/.gitignore
A		lib/kokkos/CHANGELOG.md
M		lib/kokkos/CMakeLists.txt
M		lib/kokkos/Makefile.kokkos
M		lib/kokkos/Makefile.targets
M		lib/kokkos/README
M		lib/kokkos/algorithms/src/Kokkos_Random.hpp
M		lib/kokkos/algorithms/src/Kokkos_Sort.hpp
M		lib/kokkos/algorithms/unit_tests/CMakeLists.txt
M		lib/kokkos/algorithms/unit_tests/Makefile
M		lib/kokkos/algorithms/unit_tests/TestSort.hpp
A	(dir)	lib/kokkos/benchmarks/
A	(dir)	lib/kokkos/benchmarks/bytes_and_flops/
P		lib/kokkos/benchmarks/bytes_and_flops/Makefile Copied from lib/kokkos/example/tutorial/01_hello_world/Makefile
P		lib/kokkos/benchmarks/bytes_and_flops/bench.hpp Copied from lib/kokkos/core/src/Kokkos_Concepts.hpp
P		lib/kokkos/benchmarks/bytes_and_flops/bench_stride.hpp Copied from lib/kokkos/core/src/impl/Kokkos_CPUDiscovery.cpp
A		lib/kokkos/benchmarks/bytes_and_flops/bench_unroll_stride.hpp
P		lib/kokkos/benchmarks/bytes_and_flops/main.cpp Copied from lib/kokkos/core/unit_test/TestMemorySpaceTracking.hpp
A	(dir)	lib/kokkos/benchmarks/gather/
P		lib/kokkos/benchmarks/gather/Makefile Copied from lib/kokkos/example/tutorial/01_hello_world/Makefile
P		lib/kokkos/benchmarks/gather/gather.hpp Copied from lib/kokkos/core/src/Kokkos_Concepts.hpp
A		lib/kokkos/benchmarks/gather/gather_unroll.hpp
V		lib/kokkos/{benchmarks/gather/main.cpp ← core/src/impl/Kokkos_HBWAllocators.cpp}
A	(dir)	lib/kokkos/bin/
P		lib/kokkos/bin/nvcc_wrapper Copied from lib/kokkos/config/nvcc_wrapper
M		lib/kokkos/cmake/deps/CUSPARSE.cmake
M		lib/kokkos/cmake/tribits.cmake
M		lib/kokkos/config/configure_compton_cpu.sh
M		lib/kokkos/config/configure_compton_mic.sh
M		lib/kokkos/config/configure_kokkos.sh
M		lib/kokkos/config/configure_kokkos_nvidia.sh
M		lib/kokkos/config/configure_shannon.sh
M		lib/kokkos/config/kokkos-trilinos-integration-procedure.txt
M		lib/kokkos/config/master_history.txt
P		lib/kokkos/config/nvcc_wrapper Copied to lib/kokkos/bin/nvcc_wrapper
M		lib/kokkos/config/test_all_sandia
A	(dir)	lib/kokkos/config/trilinos-integration/
A		lib/kokkos/config/trilinos-integration/prepare_trilinos_repos.sh
M		lib/kokkos/containers/performance_tests/CMakeLists.txt
M		lib/kokkos/containers/performance_tests/Makefile
P		lib/kokkos/containers/performance_tests/TestCuda.cpp Copied to lib/kokkos/core/unit_test/cuda/TestCuda.hpp
M		lib/kokkos/containers/performance_tests/TestDynRankView.hpp
M		lib/kokkos/containers/src/Kokkos_DualView.hpp
M		lib/kokkos/containers/src/Kokkos_DynRankView.hpp
M		lib/kokkos/containers/src/Kokkos_DynamicView.hpp
A		lib/kokkos/containers/src/Kokkos_ErrorReporter.hpp
D		lib/kokkos/containers/src/Kokkos_SegmentedView.hpp
M		lib/kokkos/containers/src/Kokkos_UnorderedMap.hpp
M		lib/kokkos/containers/unit_tests/CMakeLists.txt
M		lib/kokkos/containers/unit_tests/Makefile
M		lib/kokkos/containers/unit_tests/TestCuda.cpp
M		lib/kokkos/containers/unit_tests/TestDynViewAPI.hpp
A		lib/kokkos/containers/unit_tests/TestErrorReporter.hpp
M		lib/kokkos/containers/unit_tests/TestOpenMP.cpp
D		lib/kokkos/containers/unit_tests/TestSegmentedView.hpp
M		lib/kokkos/containers/unit_tests/TestSerial.cpp
M		lib/kokkos/containers/unit_tests/TestThreads.cpp
M		lib/kokkos/core/cmake/Dependencies.cmake
M		lib/kokkos/core/cmake/KokkosCore_config.h.in
M		lib/kokkos/core/perf_test/CMakeLists.txt
M		lib/kokkos/core/perf_test/Makefile
M		lib/kokkos/core/perf_test/PerfTestHost.cpp
V		lib/kokkos/core/src/Cuda/{KokkosExp_Cuda_View.hpp → Kokkos_Cuda_View.hpp}
M		lib/kokkos/core/src/Cuda/Kokkos_CudaSpace.cpp
M		lib/kokkos/core/src/Cuda/Kokkos_Cuda_Impl.cpp
M		lib/kokkos/core/src/Cuda/Kokkos_Cuda_Parallel.hpp
M		lib/kokkos/core/src/Cuda/Kokkos_Cuda_ReduceScan.hpp
M		lib/kokkos/core/src/Cuda/Kokkos_Cuda_Task.cpp
M		lib/kokkos/core/src/Cuda/Kokkos_Cuda_Task.hpp
D		lib/kokkos/core/src/Cuda/Kokkos_Cuda_TaskPolicy.cpp
D		lib/kokkos/core/src/Cuda/Kokkos_Cuda_TaskPolicy.hpp
V		lib/kokkos/core/src/Cuda/{Kokkos_Cuda_View.hpp ← KokkosExp_Cuda_View.hpp}
M		lib/kokkos/core/src/Cuda/Kokkos_Cuda_abort.hpp
M		lib/kokkos/core/src/Kokkos_Atomic.hpp
P		lib/kokkos/core/src/Kokkos_Concepts.hpp Copied to multiple locations: lib/kokkos/benchmarks/bytes_and_flops/bench.hpp lib/kokkos/benchmarks/gather/gather.hpp
M		lib/kokkos/core/src/Kokkos_Core.hpp
M		lib/kokkos/core/src/Kokkos_Core_fwd.hpp
M		lib/kokkos/core/src/Kokkos_Cuda.hpp
M		lib/kokkos/core/src/Kokkos_CudaSpace.hpp
M		lib/kokkos/core/src/Kokkos_ExecPolicy.hpp
M		lib/kokkos/core/src/Kokkos_HBWSpace.hpp
M		lib/kokkos/core/src/Kokkos_HostSpace.hpp
M		lib/kokkos/core/src/Kokkos_Layout.hpp
M		lib/kokkos/core/src/Kokkos_Macros.hpp
M		lib/kokkos/core/src/Kokkos_MemoryPool.hpp
M		lib/kokkos/core/src/Kokkos_MemoryTraits.hpp
M		lib/kokkos/core/src/Kokkos_OpenMP.hpp
M		lib/kokkos/core/src/Kokkos_Parallel_Reduce.hpp
M		lib/kokkos/core/src/Kokkos_Qthread.hpp
M		lib/kokkos/core/src/Kokkos_Serial.hpp
V		lib/kokkos/core/src/{Kokkos_TaskPolicy.hpp → Kokkos_TaskScheduler.hpp}
V		lib/kokkos/core/src/{Kokkos_TaskScheduler.hpp ← Kokkos_TaskPolicy.hpp}
M		lib/kokkos/core/src/Kokkos_Threads.hpp
P		lib/kokkos/core/src/Kokkos_Timer.hpp Copied from lib/kokkos/core/src/impl/Kokkos_Timer.hpp
M		lib/kokkos/core/src/Kokkos_View.hpp
M		lib/kokkos/core/src/Makefile
M		lib/kokkos/core/src/OpenMP/Kokkos_OpenMP_Task.cpp
M		lib/kokkos/core/src/OpenMP/Kokkos_OpenMP_Task.hpp
M		lib/kokkos/core/src/OpenMP/Kokkos_OpenMPexec.cpp
M		lib/kokkos/core/src/OpenMP/Kokkos_OpenMPexec.hpp
M		lib/kokkos/core/src/Qthread/Kokkos_Qthread_Parallel.hpp
M		lib/kokkos/core/src/Qthread/Kokkos_Qthread_TaskPolicy.cpp
M		lib/kokkos/core/src/Qthread/Kokkos_Qthread_TaskPolicy.hpp
M		lib/kokkos/core/src/Threads/Kokkos_ThreadsExec.cpp
M		lib/kokkos/core/src/Threads/Kokkos_ThreadsTeam.hpp
D		lib/kokkos/core/src/Threads/Kokkos_Threads_TaskPolicy.cpp
D		lib/kokkos/core/src/Threads/Kokkos_Threads_TaskPolicy.hpp
V		lib/kokkos/core/src/impl/{KokkosExp_SharedAlloc.cpp → Kokkos_SharedAlloc.cpp}
V		lib/kokkos/core/src/impl/{KokkosExp_SharedAlloc.hpp → Kokkos_SharedAlloc.hpp}
V		lib/kokkos/core/src/impl/{KokkosExp_ViewArray.hpp → Kokkos_ViewArray.hpp}
V		lib/kokkos/core/src/impl/{KokkosExp_ViewCtor.hpp → Kokkos_ViewCtor.hpp}
V		lib/kokkos/core/src/impl/{KokkosExp_ViewMapping.hpp → Kokkos_ViewMapping.hpp}
V		lib/kokkos/core/src/impl/{KokkosExp_ViewTile.hpp → Kokkos_ViewTile.hpp}
D		lib/kokkos/core/src/impl/Kokkos_AnalyzeShape.hpp
M		lib/kokkos/core/src/impl/Kokkos_Atomic_Compare_Exchange_Strong.hpp
M		lib/kokkos/core/src/impl/Kokkos_Atomic_Decrement.hpp
M		lib/kokkos/core/src/impl/Kokkos_Atomic_Exchange.hpp
M		lib/kokkos/core/src/impl/Kokkos_Atomic_Fetch_Add.hpp
M		lib/kokkos/core/src/impl/Kokkos_Atomic_Fetch_And.hpp
M		lib/kokkos/core/src/impl/Kokkos_Atomic_Fetch_Or.hpp
M		lib/kokkos/core/src/impl/Kokkos_Atomic_Fetch_Sub.hpp
M		lib/kokkos/core/src/impl/Kokkos_Atomic_Generic.hpp
P		lib/kokkos/core/src/impl/Kokkos_CPUDiscovery.cpp Copied to lib/kokkos/benchmarks/bytes_and_flops/bench_stride.hpp
M		lib/kokkos/core/src/impl/Kokkos_Core.cpp
P		lib/kokkos/core/src/impl/Kokkos_Error.hpp Copied to lib/kokkos/core/src/impl/Kokkos_Tags.hpp
M		lib/kokkos/core/src/impl/Kokkos_FunctorAdapter.hpp
V		lib/kokkos/{core/src/impl/Kokkos_HBWAllocators.cpp → benchmarks/gather/main.cpp}
V		lib/kokkos/core/{src/impl/Kokkos_HBWAllocators.hpp → unit_test/TestDefaultDeviceType_b.cpp}
M		lib/kokkos/core/src/impl/Kokkos_HBWSpace.cpp
M		lib/kokkos/core/src/impl/Kokkos_HostSpace.cpp
M		lib/kokkos/core/src/impl/Kokkos_Memory_Fence.hpp
M		lib/kokkos/core/src/impl/Kokkos_Profiling_Interface.cpp
M		lib/kokkos/core/src/impl/Kokkos_Profiling_Interface.hpp
M		lib/kokkos/core/src/impl/Kokkos_Serial_Task.cpp
M		lib/kokkos/core/src/impl/Kokkos_Serial_Task.hpp
D		lib/kokkos/core/src/impl/Kokkos_Serial_TaskPolicy.cpp
D		lib/kokkos/core/src/impl/Kokkos_Serial_TaskPolicy.hpp
D		lib/kokkos/core/src/impl/Kokkos_Shape.cpp
D		lib/kokkos/core/src/impl/Kokkos_Shape.hpp
V		lib/kokkos/core/src/impl/{Kokkos_SharedAlloc.cpp ← KokkosExp_SharedAlloc.cpp}
V		lib/kokkos/core/src/impl/{Kokkos_SharedAlloc.hpp ← KokkosExp_SharedAlloc.hpp}
P		lib/kokkos/core/src/impl/Kokkos_Singleton.hpp Deleted after being copied to multiple locations: lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c01.cpp lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c02.cpp lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c04.cpp lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c07.cpp lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c10.cpp lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_c.cpp lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_g.cpp lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_h.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c01.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c02.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c04.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c07.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c10.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_ViewAPI_a.cpp lib/kokkos/core/unit_test/serial/TestSerial_SubView_c01.cpp lib/kokkos/core/unit_test/serial/TestSerial_SubView_c02.cpp lib/kokkos/core/unit_test/serial/TestSerial_SubView_c04.cpp lib/kokkos/core/unit_test/serial/TestSerial_SubView_c07.cpp lib/kokkos/core/unit_test/serial/TestSerial_SubView_c10.cpp lib/kokkos/core/unit_test/serial/TestSerial_ViewAPI_a.cpp lib/kokkos/core/unit_test/threads/TestThreads_SubView_c01.cpp lib/kokkos/core/unit_test/threads/TestThreads_SubView_c04.cpp lib/kokkos/core/unit_test/threads/TestThreads_SubView_c07.cpp lib/kokkos/core/unit_test/threads/TestThreads_SubView_c10.cpp lib/kokkos/core/unit_test/threads/TestThreads_ViewAPI_a.cpp
P		lib/kokkos/core/src/impl/Kokkos_Tags.hpp Copied from lib/kokkos/core/src/impl/Kokkos_Error.hpp
M		lib/kokkos/core/src/impl/Kokkos_TaskQueue.hpp
M		lib/kokkos/core/src/impl/Kokkos_TaskQueue_impl.hpp
P		lib/kokkos/core/src/impl/Kokkos_Timer.hpp Copied to lib/kokkos/core/src/Kokkos_Timer.hpp
A		lib/kokkos/core/src/impl/Kokkos_Utilities.hpp
V		lib/kokkos/core/src/impl/{Kokkos_ViewArray.hpp ← KokkosExp_ViewArray.hpp}
V		lib/kokkos/core/src/impl/{Kokkos_ViewCtor.hpp ← KokkosExp_ViewCtor.hpp}
D		lib/kokkos/core/src/impl/Kokkos_ViewDefault.hpp
V		lib/kokkos/core/src/impl/{Kokkos_ViewMapping.hpp ← KokkosExp_ViewMapping.hpp}
D		lib/kokkos/core/src/impl/Kokkos_ViewOffset.hpp
D		lib/kokkos/core/src/impl/Kokkos_ViewSupport.hpp
V		lib/kokkos/core/src/impl/{Kokkos_ViewTile.hpp ← KokkosExp_ViewTile.hpp}
P		lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp Deleted after being copied to multiple locations: lib/kokkos/core/unit_test/cuda/TestCuda_Reductions_a.cpp lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c03.cpp lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c05.cpp lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c06.cpp lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c08.cpp lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c09.cpp lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c11.cpp lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c12.cpp lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_a.cpp lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_b.cpp lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_f.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c03.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c05.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c06.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c08.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c09.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c11.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c12.cpp lib/kokkos/core/unit_test/serial/TestSerial_SubView_c03.cpp lib/kokkos/core/unit_test/serial/TestSerial_SubView_c05.cpp lib/kokkos/core/unit_test/serial/TestSerial_SubView_c06.cpp lib/kokkos/core/unit_test/serial/TestSerial_SubView_c08.cpp lib/kokkos/core/unit_test/serial/TestSerial_SubView_c09.cpp lib/kokkos/core/unit_test/serial/TestSerial_SubView_c11.cpp lib/kokkos/core/unit_test/serial/TestSerial_SubView_c12.cpp lib/kokkos/core/unit_test/threads/TestThreads_SubView_c02.cpp lib/kokkos/core/unit_test/threads/TestThreads_SubView_c03.cpp lib/kokkos/core/unit_test/threads/TestThreads_SubView_c05.cpp lib/kokkos/core/unit_test/threads/TestThreads_SubView_c06.cpp lib/kokkos/core/unit_test/threads/TestThreads_SubView_c08.cpp lib/kokkos/core/unit_test/threads/TestThreads_SubView_c09.cpp lib/kokkos/core/unit_test/threads/TestThreads_SubView_c11.cpp lib/kokkos/core/unit_test/threads/TestThreads_SubView_c12.cpp
M		lib/kokkos/core/unit_test/CMakeLists.txt
M		lib/kokkos/core/unit_test/Makefile
M		lib/kokkos/core/unit_test/TestAggregate.hpp
D		lib/kokkos/core/unit_test/TestAggregateReduction.hpp
M		lib/kokkos/core/unit_test/TestAtomicOperations.hpp
M		lib/kokkos/core/unit_test/TestCompilerMacros.hpp
D		lib/kokkos/core/unit_test/TestCuda.cpp
D		lib/kokkos/core/unit_test/TestCuda_a.cpp
D		lib/kokkos/core/unit_test/TestCuda_b.cpp
V		lib/kokkos/core/unit_test/{TestCuda_c.cpp → cuda/TestCuda_Atomics.cpp}
V		lib/kokkos/core/unit_test/{TestDefaultDeviceType.cpp → TestDefaultDeviceType_d.cpp}
M		lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit.hpp
P		lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp Copied to multiple locations: lib/kokkos/core/unit_test/TestDefaultDeviceType_c.cpp lib/kokkos/core/unit_test/cuda/TestCuda_SubView_a.cpp lib/kokkos/core/unit_test/cuda/TestCuda_SubView_b.cpp lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_d.cpp lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_e.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_b.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_ViewAPI_b.cpp lib/kokkos/core/unit_test/serial/TestSerial_SubView_a.cpp lib/kokkos/core/unit_test/serial/TestSerial_SubView_b.cpp lib/kokkos/core/unit_test/serial/TestSerial_ViewAPI_b.cpp lib/kokkos/core/unit_test/threads/TestThreads_SubView_a.cpp lib/kokkos/core/unit_test/threads/TestThreads_SubView_b.cpp lib/kokkos/core/unit_test/threads/TestThreads_ViewAPI_b.cpp
V		lib/kokkos/core/{unit_test/TestDefaultDeviceType_b.cpp ← src/impl/Kokkos_HBWAllocators.hpp}
P		lib/kokkos/core/unit_test/TestDefaultDeviceType_c.cpp Copied from lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
V		lib/kokkos/core/unit_test/{TestDefaultDeviceType_d.cpp ← TestDefaultDeviceType.cpp}
M		lib/kokkos/core/unit_test/TestMemoryPool.hpp
P		lib/kokkos/core/unit_test/TestMemorySpaceTracking.hpp Deleted after being copied to multiple locations: lib/kokkos/benchmarks/bytes_and_flops/main.cpp lib/kokkos/core/unit_test/serial/TestSerial.hpp
V		lib/kokkos/core/unit_test/{TestOpenMP.cpp → openmp/TestOpenMP_Atomics.cpp}
P		lib/kokkos/core/unit_test/TestOpenMP_a.cpp Deleted after being copied to multiple locations: lib/kokkos/core/unit_test/openmp/TestOpenMP.hpp lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_a.cpp lib/kokkos/core/unit_test/threads/TestThreads.hpp
P		lib/kokkos/core/unit_test/TestOpenMP_b.cpp Deleted after being copied to multiple locations: lib/kokkos/core/unit_test/openmp/TestOpenMP_Reductions.cpp lib/kokkos/core/unit_test/openmp/TestOpenMP_Team.cpp
D		lib/kokkos/core/unit_test/TestOpenMP_c.cpp
M		lib/kokkos/core/unit_test/TestPolicyConstruction.hpp
M		lib/kokkos/core/unit_test/TestQthread.cpp
M		lib/kokkos/core/unit_test/TestRange.hpp
M		lib/kokkos/core/unit_test/TestReduce.hpp
D		lib/kokkos/core/unit_test/TestSerial.cpp
M		lib/kokkos/core/unit_test/TestSharedAlloc.hpp
M		lib/kokkos/core/unit_test/TestSynchronic.cpp
M		lib/kokkos/core/unit_test/TestSynchronic.hpp
D		lib/kokkos/core/unit_test/TestTaskPolicy.hpp
A		lib/kokkos/core/unit_test/TestTaskScheduler.hpp
M		lib/kokkos/core/unit_test/TestTeam.hpp
M		lib/kokkos/core/unit_test/TestTeamVector.hpp
D		lib/kokkos/core/unit_test/TestThreads.cpp
M		lib/kokkos/core/unit_test/TestTile.hpp
A		lib/kokkos/core/unit_test/TestUtilities.hpp
M		lib/kokkos/core/unit_test/TestViewAPI.hpp
D		lib/kokkos/core/unit_test/TestViewImpl.hpp
M		lib/kokkos/core/unit_test/TestViewMapping.hpp
M		lib/kokkos/core/unit_test/TestViewOfClass.hpp
M		lib/kokkos/core/unit_test/TestViewSubview.hpp
A	(dir)	lib/kokkos/core/unit_test/cuda/
P		lib/kokkos/core/unit_test/cuda/TestCuda.hpp Copied from lib/kokkos/containers/performance_tests/TestCuda.cpp
V		lib/kokkos/core/unit_test/{cuda/TestCuda_Atomics.cpp ← TestCuda_c.cpp}
A		lib/kokkos/core/unit_test/cuda/TestCuda_Other.cpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_Reductions_a.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
A		lib/kokkos/core/unit_test/cuda/TestCuda_Reductions_b.cpp
A		lib/kokkos/core/unit_test/cuda/TestCuda_Spaces.cpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_a.cpp Copied from lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_b.cpp Copied from lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c01.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c02.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c03.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c04.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c05.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c06.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c07.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c08.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c09.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c10.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c11.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c12.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
A		lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c_all.cpp
A		lib/kokkos/core/unit_test/cuda/TestCuda_Team.cpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_a.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_b.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_c.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_d.cpp Copied from lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_e.cpp Copied from lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_f.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_g.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_h.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
A	(dir)	lib/kokkos/core/unit_test/openmp/
P		lib/kokkos/core/unit_test/openmp/TestOpenMP.hpp Copied from lib/kokkos/core/unit_test/TestOpenMP_a.cpp
V		lib/kokkos/core/unit_test/{openmp/TestOpenMP_Atomics.cpp ← TestOpenMP.cpp}
A		lib/kokkos/core/unit_test/openmp/TestOpenMP_Other.cpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_Reductions.cpp Copied from lib/kokkos/core/unit_test/TestOpenMP_b.cpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_a.cpp Copied from lib/kokkos/core/unit_test/TestOpenMP_a.cpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_b.cpp Copied from lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c01.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c02.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c03.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c04.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c05.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c06.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c07.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c08.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c09.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c10.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c11.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c12.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
A		lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c_all.cpp
V		lib/kokkos/core/unit_test/{openmp/TestOpenMP_Team.cpp ← TestOpenMP_b.cpp}
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_ViewAPI_a.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/openmp/TestOpenMP_ViewAPI_b.cpp Copied from lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
A	(dir)	lib/kokkos/core/unit_test/serial/
V		lib/kokkos/core/unit_test/{serial/TestSerial.hpp ← TestMemorySpaceTracking.hpp}
A		lib/kokkos/core/unit_test/serial/TestSerial_Atomics.cpp
A		lib/kokkos/core/unit_test/serial/TestSerial_Other.cpp
A		lib/kokkos/core/unit_test/serial/TestSerial_Reductions.cpp
P		lib/kokkos/core/unit_test/serial/TestSerial_SubView_a.cpp Copied from lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
P		lib/kokkos/core/unit_test/serial/TestSerial_SubView_b.cpp Copied from lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
P		lib/kokkos/core/unit_test/serial/TestSerial_SubView_c01.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/serial/TestSerial_SubView_c02.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/serial/TestSerial_SubView_c03.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/serial/TestSerial_SubView_c04.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/serial/TestSerial_SubView_c05.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/serial/TestSerial_SubView_c06.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/serial/TestSerial_SubView_c07.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/serial/TestSerial_SubView_c08.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/serial/TestSerial_SubView_c09.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/serial/TestSerial_SubView_c10.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/serial/TestSerial_SubView_c11.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/serial/TestSerial_SubView_c12.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
A		lib/kokkos/core/unit_test/serial/TestSerial_SubView_c_all.cpp
A		lib/kokkos/core/unit_test/serial/TestSerial_Team.cpp
P		lib/kokkos/core/unit_test/serial/TestSerial_ViewAPI_a.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/serial/TestSerial_ViewAPI_b.cpp Copied from lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
A	(dir)	lib/kokkos/core/unit_test/threads/
V		lib/kokkos/core/unit_test/{threads/TestThreads.hpp ← TestOpenMP_a.cpp}
A		lib/kokkos/core/unit_test/threads/TestThreads_Atomics.cpp
A		lib/kokkos/core/unit_test/threads/TestThreads_Other.cpp
A		lib/kokkos/core/unit_test/threads/TestThreads_Reductions.cpp
P		lib/kokkos/core/unit_test/threads/TestThreads_SubView_a.cpp Copied from lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
P		lib/kokkos/core/unit_test/threads/TestThreads_SubView_b.cpp Copied from lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
P		lib/kokkos/core/unit_test/threads/TestThreads_SubView_c01.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/threads/TestThreads_SubView_c02.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/threads/TestThreads_SubView_c03.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/threads/TestThreads_SubView_c04.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/threads/TestThreads_SubView_c05.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/threads/TestThreads_SubView_c06.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/threads/TestThreads_SubView_c07.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/threads/TestThreads_SubView_c08.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/threads/TestThreads_SubView_c09.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
P		lib/kokkos/core/unit_test/threads/TestThreads_SubView_c10.cpp Copied from lib/kokkos/core/src/impl/Kokkos_Singleton.hpp
P		lib/kokkos/core/unit_test/threads/TestThreads_SubView_c11.cpp Copied from lib/kokkos/core/src/impl/Kokkos_ViewTileLeft.hpp
V		lib/kokkos/core/{unit_test/threads/TestThreads_SubView_c12.cpp ← src/impl/Kokkos_ViewTileLeft.hpp}
A		lib/kokkos/core/unit_test/threads/TestThreads_Team.cpp
V		lib/kokkos/core/{unit_test/threads/TestThreads_ViewAPI_a.cpp ← src/impl/Kokkos_Singleton.hpp}
P		lib/kokkos/core/unit_test/threads/TestThreads_ViewAPI_b.cpp Copied from lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
D		lib/kokkos/doc/README
A		lib/kokkos/doc/design_notes_space_instances.md
M		lib/kokkos/example/common/VectorImport.hpp
M		lib/kokkos/example/feint/ElemFunctor.hpp
M		lib/kokkos/example/feint/Makefile
M		lib/kokkos/example/fenl/Makefile
M		lib/kokkos/example/fenl/fenl_impl.hpp
M		lib/kokkos/example/fixture/Makefile
P		lib/kokkos/example/global_2_local_ids/Makefile Copied from lib/kokkos/example/query_device/Makefile
P		lib/kokkos/example/grow_array/Makefile Copied from lib/kokkos/example/query_device/Makefile
D		lib/kokkos/example/ichol
D		lib/kokkos/example/ichol/Makefile
D		lib/kokkos/example/ichol/example
D		lib/kokkos/example/ichol/example/example_chol_performance_device.hpp
D		lib/kokkos/example/ichol/example/example_chol_performance_device_cuda.cpp
D		lib/kokkos/example/ichol/example/example_chol_performance_device_pthread.cpp
D		lib/kokkos/example/ichol/src
D		lib/kokkos/example/ichol/src/chol.hpp
D		lib/kokkos/example/ichol/src/chol_u.hpp
D		lib/kokkos/example/ichol/src/chol_u_right_look_by_blocks.hpp
D		lib/kokkos/example/ichol/src/chol_u_unblocked_opt1.hpp
D		lib/kokkos/example/ichol/src/chol_u_unblocked_opt2.hpp
D		lib/kokkos/example/ichol/src/control.hpp
D		lib/kokkos/example/ichol/src/coo.hpp
D		lib/kokkos/example/ichol/src/crs_matrix_base.hpp
D		lib/kokkos/example/ichol/src/crs_matrix_base_import.hpp
D		lib/kokkos/example/ichol/src/crs_matrix_helper.hpp
D		lib/kokkos/example/ichol/src/crs_matrix_helper_impl.hpp
D		lib/kokkos/example/ichol/src/crs_matrix_view.hpp
D		lib/kokkos/example/ichol/src/crs_row_view.hpp
D		lib/kokkos/example/ichol/src/dot.hpp
D		lib/kokkos/example/ichol/src/gemm.hpp
D		lib/kokkos/example/ichol/src/gemm_ct_nt.hpp
D		lib/kokkos/example/ichol/src/gemm_ct_nt_for_factor_blocked.hpp
D		lib/kokkos/example/ichol/src/graph_helper_scotch.hpp
D		lib/kokkos/example/ichol/src/herk.hpp
D		lib/kokkos/example/ichol/src/herk_u_ct.hpp
D		lib/kokkos/example/ichol/src/herk_u_ct_for_factor_blocked.hpp
D		lib/kokkos/example/ichol/src/norm.hpp
D		lib/kokkos/example/ichol/src/partition.hpp
D		lib/kokkos/example/ichol/src/scale.hpp
D		lib/kokkos/example/ichol/src/symbolic_factor_helper.hpp
D		lib/kokkos/example/ichol/src/symbolic_task.hpp
D		lib/kokkos/example/ichol/src/task_factory.hpp
D		lib/kokkos/example/ichol/src/task_view.hpp
D		lib/kokkos/example/ichol/src/trsm.hpp
D		lib/kokkos/example/ichol/src/trsm_l_u_ct.hpp
D		lib/kokkos/example/ichol/src/trsm_l_u_ct_for_factor_blocked.hpp
D		lib/kokkos/example/ichol/src/util.cpp
D		lib/kokkos/example/ichol/src/util.hpp
P		lib/kokkos/example/md_skeleton/Makefile Copied from lib/kokkos/example/query_device/Makefile
P		lib/kokkos/example/multi_fem/Makefile Copied from lib/kokkos/example/query_device/Makefile
P		lib/kokkos/example/query_device/Makefile Copied to multiple locations: lib/kokkos/example/global_2_local_ids/Makefile lib/kokkos/example/grow_array/Makefile lib/kokkos/example/md_skeleton/Makefile lib/kokkos/example/multi_fem/Makefile lib/kokkos/example/sort_array/Makefile
P		lib/kokkos/example/sort_array/Makefile Copied from lib/kokkos/example/query_device/Makefile
M		lib/kokkos/example/sort_array/sort_array.hpp
P		lib/kokkos/example/tutorial/01_hello_world/Makefile Copied to multiple locations: lib/kokkos/benchmarks/bytes_and_flops/Makefile lib/kokkos/benchmarks/gather/Makefile lib/kokkos/example/tutorial/01_hello_world_lambda/Makefile lib/kokkos/example/tutorial/02_simple_reduce_lambda/Makefile lib/kokkos/example/tutorial/03_simple_view_lambda/Makefile
P		lib/kokkos/example/tutorial/01_hello_world_lambda/Makefile Copied from lib/kokkos/example/tutorial/01_hello_world/Makefile
M		lib/kokkos/example/tutorial/01_hello_world_lambda/hello_world_lambda.cpp
M		lib/kokkos/example/tutorial/02_simple_reduce/Makefile
P		lib/kokkos/example/tutorial/02_simple_reduce_lambda/Makefile Copied from lib/kokkos/example/tutorial/01_hello_world/Makefile
M		lib/kokkos/example/tutorial/02_simple_reduce_lambda/simple_reduce_lambda.cpp
M		lib/kokkos/example/tutorial/03_simple_view/Makefile
P		lib/kokkos/example/tutorial/03_simple_view_lambda/Makefile Copied from lib/kokkos/example/tutorial/01_hello_world/Makefile
M		lib/kokkos/example/tutorial/03_simple_view_lambda/simple_view_lambda.cpp
M		lib/kokkos/example/tutorial/04_simple_memoryspaces/Makefile
M		lib/kokkos/example/tutorial/05_simple_atomics/Makefile
P		lib/kokkos/example/tutorial/Advanced_Views/01_data_layouts/Makefile Copied to lib/kokkos/example/tutorial/Hierarchical_Parallelism/01_thread_teams_lambda/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/02_memory_traits/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/03_subviews/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/04_dualviews/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/04_dualviews/dual_view.cpp
M		lib/kokkos/example/tutorial/Advanced_Views/05_NVIDIA_UVM/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/05_NVIDIA_UVM/uvm_example.cpp
M		lib/kokkos/example/tutorial/Advanced_Views/06_AtomicViews/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/07_Overlapping_DeepCopy/Makefile
M		lib/kokkos/example/tutorial/Advanced_Views/Makefile
M		lib/kokkos/example/tutorial/Algorithms/01_random_numbers/Makefile
M		lib/kokkos/example/tutorial/Algorithms/01_random_numbers/random_numbers.cpp
M		lib/kokkos/example/tutorial/Algorithms/Makefile
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/01_thread_teams/Makefile
P		lib/kokkos/example/tutorial/Hierarchical_Parallelism/01_thread_teams_lambda/Makefile Copied from lib/kokkos/example/tutorial/Advanced_Views/01_data_layouts/Makefile
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/01_thread_teams_lambda/thread_teams_lambda.cpp
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/02_nested_parallel_for/Makefile
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/03_vectorization/Makefile
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/04_team_scan/Makefile
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/04_team_scan/team_scan.cpp
M		lib/kokkos/example/tutorial/Hierarchical_Parallelism/Makefile
M		lib/kokkos/example/tutorial/Makefile
M		lib/kokkos/generate_makefile.bash
M		src/.gitignore
M		src/GRANULAR/fix_pour.cpp
M		src/GRANULAR/fix_wall_gran.cpp
M		src/GRANULAR/fix_wall_gran_region.cpp
M		src/KOKKOS/fix_qeq_reax_kokkos.cpp
M		src/KOKKOS/fix_qeq_reax_kokkos.h
M		src/KOKKOS/kokkos_type.h
M		src/KOKKOS/pair_lj_charmm_coul_charmm_implicit_kokkos.h
M		src/KOKKOS/pair_lj_charmm_coul_charmm_kokkos.h
M		src/KOKKOS/pair_lj_charmm_coul_long_kokkos.h
M		src/KOKKOS/pair_lj_class2_coul_cut_kokkos.h
M		src/KOKKOS/pair_lj_class2_coul_long_kokkos.h
M		src/KOKKOS/pair_lj_cut_coul_cut_kokkos.h
M		src/KOKKOS/pair_lj_cut_coul_debye_kokkos.h
M		src/KOKKOS/pair_lj_cut_coul_dsf_kokkos.h
M		src/KOKKOS/pair_lj_cut_coul_long_kokkos.h
M		src/KOKKOS/pair_lj_gromacs_coul_gromacs_kokkos.cpp
M		src/KOKKOS/pair_lj_gromacs_coul_gromacs_kokkos.h
M		src/KSPACE/pair_buck_long_coul_long.cpp
M		src/KSPACE/pair_lj_long_coul_long.cpp
M		src/MAKE/MACHINES/Makefile.white
M		src/MAKE/OPTIONS/Makefile.intel_cpu
M		src/MAKE/OPTIONS/Makefile.intel_cpu_intelmpi
M		src/MAKE/OPTIONS/Makefile.knl
M		src/MAKE/OPTIONS/Makefile.kokkos_cuda_mpich
M		src/USER-DPD/fix_rx.cpp
M		src/USER-DPD/fix_rx.h
M		src/USER-MISC/fix_flow_gauss.cpp
M		src/USER-MISC/fix_ipi.cpp
M		src/USER-MISC/fix_ipi.h
M		src/USER-MISC/fix_srp.cpp
M		src/atom_vec_atomic.cpp
M		src/atom_vec_body.cpp
M		src/atom_vec_charge.cpp
M		src/atom_vec_ellipsoid.cpp
M		src/atom_vec_hybrid.cpp
M		src/atom_vec_line.cpp
M		src/atom_vec_sphere.cpp
M		src/atom_vec_tri.cpp
M		src/comm_brick.cpp
M		src/compute_chunk_atom.cpp
M		src/compute_coord_atom.cpp
M		src/compute_coord_atom.h
M		src/compute_orientorder_atom.cpp
M		src/compute_orientorder_atom.h
M		src/domain.cpp
M		src/domain.h
M		src/error.cpp
M		src/finish.cpp
M		src/input.cpp
M		src/input.h
M		src/math_extra.h
M		src/neighbor.cpp
M		src/npair.cpp
M		src/region.cpp
M		src/version.h
M		tools/ch2lmp/charmm2lammps.pl