Diffusion Nanopore Tools (master) History

Nanopore-tools/NanoporeClasses.py
master62e380e32bf3e81fec6bacc…

Jun 12 2019

Moved sorting
62e380e32bf3
·deen on Jun 12 2019, 16:19.

Jun 11 2019

Changed type of CUSUM fitted events to 'CUSUM'
96d8adf9e29d
·deen on Jun 11 2019, 09:39.
changed eventLengthCUSUM assignation
3e86162b8769
·deen on Jun 11 2019, 09:36.
Added saving of currentDrop for impulse
34ac37040d47
·deen on Jun 11 2019, 09:07.

Jun 7 2019

Modified detection of events, added option to fit traces with function and use…
ebb436057178
·deen on Jun 7 2019, 17:59.

Apr 26 2019

amazing edits and voltage based plotting by Jochem
f3ada36a22f3
·deen / thakur on Apr 26 2019, 17:28.

Mar 22 2019

Changed classes such that Currentdrop is always mean
1a44d300663d
·deen on Mar 22 2019, 17:33.
Removed import EventPlots, was unused
524548c68787
·deen on Mar 22 2019, 16:02.

Mar 13 2019

bugfix
b312fafccb7f
·deen on Mar 13 2019, 17:54.
added GetEventTypes
3d74c7680482
·Axopatch on Mar 13 2019, 17:41.
Open multiple files
930e44a351de
·Axopatch on Mar 13 2019, 17:22.

Jan 24 2019

added docstrings to document some functions
978ab3ff6e83
·schneuwly on Jan 24 2019, 00:20.

Sep 26 2018

Changed to Rough
aaef6f69371d
·deen on Sep 26 2018, 14:45.
Misspelling......
b8b0a10ea649
·deen on Sep 26 2018, 14:27.
Bugfix, incorrectly estimating baseline
0304f8d4c759
·deen on Sep 26 2018, 14:24.
Changed name from Nanoporeplots to EventPlots. Added interactive plot, Split…
a8388ba67ded
·deen on Sep 26 2018, 09:42.

Sep 25 2018

Removed plotting from nanoporeclases. Added CUSUM variables to nanoporeclasses.
1f6786480d9e
·deen on Sep 25 2018, 16:40.

Sep 21 2018

Changed saving of data
bde0ca0d1dab
·deen on Sep 21 2018, 16:09.
Implement CUSUM in event detection
2a8396bb4a6d
·deen on Sep 21 2018, 13:02.

Sep 12 2018

Added option for lowpass
2a248ed4f722
·branch: CUSUM
·deen on Sep 12 2018, 15:07.
Implemented CUSUM
d88f1af316db
·deen on Sep 12 2018, 11:20.

Sep 7 2018

Check if directory for saving exists, otherwise make it
6175240322bf
·deen on Sep 7 2018, 13:37.

Sep 6 2018

Changed filename of EventDetection. Added possibility to directly run…
84359bf20bde
·Jochem on Sep 6 2018, 13:15.

Aug 29 2018

Plot events function inside the class. Formatted axis and plotted baseline and…
7e569bbb88d0
·Jochem on Aug 29 2018, 16:43.

Aug 28 2018

fixed bug in detection of traces, and implemented minimal time (100)
1485f00e2850
·Jochem on Aug 28 2018, 07:58.

Jul 31 2018

Basic EventDetection functions, Classes for event detection and plotting…
31eb273b9a5b
·Jochem on Jul 31 2018, 14:26.