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Diffusion GYACOMO (OBSOLETE: LATEST VERSION ON gitlab.epfl.ch) (divided_output) Graph

gyacomo/src
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CommitAuthorDetailsCommitted
65c26e60a5ecAhoffmann
comments 
Jan 4 2021
17244ee7e9a9Ahoffmann
clean up 
Jan 4 2021
92ffdefc40b2Ahoffmann
update finish conditions 
Dec 17 2020
8330ee6bacdbAhoffmann
improve finish conditions for MPI 
Dec 17 2020
355bb4bf67dcAhoffmann
saving data is disabled by negative nsave now 
Dec 15 2020
accf2cc1dcaaAhoffmann
remove write_field flags 
Dec 15 2020
78e603d998d7Ahoffmann
Update on diagnostics : if nsave_nd = 0, no initial diagnostic anymore 
Dec 15 2020
a60ba8910732Ahoffmann
Exit 10% earlier than the CPU time asked to ensure final diagnostics 
Dec 15 2020
41717707cd69Ahoffmann
removed unused variables KR0KH A0KH and CANCEL_ODD_P 
Dec 15 2020
8236765d977cAhoffmann
Add a intern wallclock runtime end condition to avoid enforced slurm end 
Dec 15 2020
94c8c998dd6cAhoffmann
display run time in second as well at the end 
Dec 14 2020
e7303f1d020eAhoffmann
write the number of process in output file 
Dec 14 2020
84c2069410caAhoffmann
Added checkpoint saving rate as input parameter 
Dec 14 2020
d557efa46891Ahoffmann
Resolved a bug on checkpoint saves and reload 
Dec 10 2020
6312425216deAhoffmann
resolving shock when restart 
Dec 9 2020
a8c67f701e16Ahoffmann
adapted for opt Sapj 
Dec 8 2020
01174c61bab9Ahoffmann
avoid spamming ad the end of sim if exit normal 
Dec 8 2020
6640dd9ffb14Ahoffmann
Optimized version of nonlinear term computation 
Dec 8 2020
59cd7bfb1e50Ahoffmann
MC 
Dec 7 2020
1bacc0d864c1Ahoffmann
MC 
Dec 7 2020
41856e03467fAhoffmann
MC 
Dec 7 2020
7a631a931c3dAhoffmann
minor changes 
Dec 7 2020
d9b34ecf7d29Ahoffmann
correction needed for linear simulations 
Dec 7 2020
86f4c0a79747Ahoffmann
Remove unnecessary mpi barrier 
Dec 7 2020
ced9844792bfAhoffmann
portability update 
Nov 27 2020
8dcebe03b67eAhoffmann
managing portability 
Nov 27 2020
fde3f884b0a2Ahoffmann
minor changes 
Nov 27 2020
2c9ad2089b45Ahoffmann
solved checkpoint restart for parallel. Commented unused sections 
Nov 25 2020
b37744a10054Ahoffmann
compiles and seems to work fine. Tests ahead 
Nov 24 2020
00337f61ecdaAhoffmann
does not work 
Nov 23 2020
003c315a1937Ahoffmann
First MPI version (not working) 
Nov 18 2020
b33a417fe2ceAhoffmann
No more r,z grid bluiding since not used 
Nov 2 2020
a9140441d674Ahoffmann
srcinfo back 
Oct 30 2020
3e3e44816111Ahoffmann
Utility changes 
Oct 30 2020
44bd301d6b65Ahoffmann
Condition for Nkr=1 was wrong 
Oct 28 2020
e897c0b9e7e9Ahoffmann
correct typo for cpu time display 
Oct 28 2020
a9038b96cfaaAhoffmann
muted Inf detection terminal output 
Oct 28 2020
fafbd27875f3Ahoffmann
Small loop optimizations 
Oct 27 2020
bba838ddad3fAhoffmann
write CPU time at the end of simu 
Oct 27 2020
3d6853a0ffd8Ahoffmann
Project of adaptative time step scheme 
Oct 27 2020
222b08e4a12eAhoffmann
kr=0 symmetric initialization and enforcement at each time step 
Oct 27 2020
56b9dafb082cAhoffmann
Included a setup with sinusoidal background ES pot and density for KH 
Oct 22 2020
4817fe56aaaaAhoffmann
Added z shift to the Gaussian initialization 
Oct 5 2020
c0fb80f30a15Ahoffmann
diagnose each 5 time unit 
Oct 5 2020
19b55ed3ada6Ahoffmann
increased Gaussian init size 
Oct 5 2020
ff4a338a98c5Ahoffmann
Forgot Antialiasing... 
Oct 5 2020
5b5157b79b2fAhoffmann
HeLaZ can now run in 1D over kz for growth rate study as MOLI 
Oct 5 2020
06b78cf31a87Ahoffmann
put kz > 0 instead of kr > 0 
Oct 5 2020
46d880bc2a65Ahoffmann
non-linear term written more explicitely 
Oct 5 2020
815be2d82380Ahoffmann
slight changes 
Oct 5 2020
30bba2373d79Ahoffmann
added kpar terms and option 
Oct 5 2020
c039548751beAhoffmann
Added non linear term and convolution through DFT with FFTW3 
Sep 30 2020
af40c93ec415Ahoffmann
Origin singularity cancelation with ikr_0 variables 
Sep 30 2020
adb59059244cAhoffmann
Naming and structural change 
Sep 30 2020
e04f06e1e9b9Ahoffmann
Backup before putting non linear solver 
Sep 30 2020
2b60791c900aAhoffmann
output before checking the end of the simulation, not after 
Jul 10 2020
3a65bf26b154Ahoffmann
routines for the non linear term 
Jul 10 2020
3cf05faea4a7Ahoffmann
comments 
Jul 8 2020
f4789992022eAhoffmann
fix FC matrix allocation 
Jul 8 2020
24ace58ee294Ahoffmann
back to poke initalization 
Jul 8 2020
71e00e53ef67Ahoffmann
cleaned unused variables 
Jul 8 2020
3391be78bf1fAhoffmann
small changes in IF statements to spare computation 
Jul 7 2020
cec45a8d7a95Ahoffmann
Fixed the delta k computation 
Jul 7 2020
55ed9a870779Ahoffmann
double precision correction 
Jul 3 2020
fd7835caf85fAhoffmann
correction to end at tmax and not tmax+dt 
Jul 3 2020
8383e5bed60fAhoffmann
added arrays for coulomb collision operator 
Jul 3 2020
f994633ea802Ahoffmann
Full coulomb COSOlver files can be read now 
Jul 3 2020
f94fe3883bc1Ahoffmann
Typos and presentation 
Jun 26 2020
9e2c5064d9b9Ahoffmann
Start to implement options for collision operator and COSOlver loader 
Jun 26 2020
4516e5c72b43Ahoffmann
Dougherty collision operator 
Jun 24 2020
c7b37e0ce355Ahoffmann
multiple typos correction 
Jun 22 2020
2246519cf785Ahoffmann
typo 
Jun 22 2020
6b60bf9d6697Ahoffmann
Poke initialization (Ni00(t0) != 0 only) to imitate MOLI 
Jun 22 2020
32cebacf8406Ahoffmann
write first ion moment Ni00 as 2D output 
Jun 22 2020
99827b3bc2d4Ahoffmann
write first ion moment Ni00 as 2D output 
Jun 22 2020
815393243914Ahoffmann
change for 1d [Nepj Napj] array to 2D Nepj and 2D Nipj arrays 
Jun 18 2020
2c8206da23f8Ahoffmann
minor change 
Jun 16 2020
219ea0f9714aAhoffmann
added imaginary unit variable imagu 
Jun 16 2020
d357eac612bcAhoffmann
adaptation for new bare, bari functions 
Jun 16 2020
9636e3c5fda1Ahoffmann
wrote collisionless moments hierarchy, linear, kz 
Jun 16 2020
c073039d3fd5Ahoffmann
add functions bare, bari, rabe, rabi to handle p,j to p*j indices 
Jun 16 2020
5b8351e4af5aAhoffmann
Output the initial state 
Jun 16 2020
73c51dedb1f1Ahoffmann
light presentation changes 
Jun 16 2020
47b2d17e0d2aAhoffmann
the fields have been adapted to Hermite-Laguerre basis and kr,kz fourier space… 
Jun 12 2020
aae49312a524Ahoffmann
implementation of the linear fourier poisson equation in two dimensions and p,j… 
Jun 12 2020
9a072e2a6205Ahoffmann
first push 
Jun 11 2020
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