Diffusion lammps (efficient_neuronet) History

lammps/src
efficient_neuronet10435ca8dcc7743c7c75707…

Feb 28 2016

always delete and recreate .depend from master makefile.
cb3d9a80d885
·Axel Kohlmeyer on Feb 28 2016, 14:55.
Integrated pair_style morse/smooth/linear from stefan paquay in USER-MISC
33a3c821d123
·Axel Kohlmeyer on Feb 28 2016, 14:26.
Added a linearly smoothed variant for the Morse potential.
c22d699f742d
·Stefan Paquay / Axel Kohlmeyer on Feb 28 2016, 14:05.

Feb 27 2016

alternate approach. not yet 100% working.
16431222dab3
·Axel Kohlmeyer on Feb 27 2016, 16:31.
use mkdep.exe for faster and cleaner dependency handling
73037235b4de
·Axel Kohlmeyer on Feb 27 2016, 15:58.
remove incorrect include flag statement
cffdf5b3ae4c
·Axel Kohlmeyer on Feb 27 2016, 15:56.
Merge remote branch 'lammps-ro/master' into lammps-icms
7b2414abfb09
·Axel Kohlmeyer on Feb 27 2016, 13:14.
Added exclusion delete function and bounds check for coord2bin
94d8894f86e4
·athomps on Feb 27 2016, 00:39.

Feb 26 2016

Kokkos: reenable support for all neighbor styles
216f543e2e7c
·crtrott on Feb 26 2016, 18:34.
Kokkos: support overlapping host device calculation commit 9
4b755fb93b07
·crtrott on Feb 26 2016, 18:33.
Kokkos: support overlapping host device calculation commit 8
ba6abbd9d3fc
·crtrott on Feb 26 2016, 18:31.
Kokkos: support overlapping host device calculation commit 7
35dbc63af200
·crtrott on Feb 26 2016, 18:29.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14689 f3b2605a-c512-4ea7…
12d18e27cffd
·sjplimp on Feb 26 2016, 17:09.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14688 f3b2605a-c512-4ea7…
fe00daa91b40
·sjplimp on Feb 26 2016, 17:04.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14687 f3b2605a-c512-4ea7…
4f50ad2a6a1d
·sjplimp on Feb 26 2016, 16:56.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14686 f3b2605a-c512-4ea7…
ea6276657576
·sjplimp on Feb 26 2016, 16:55.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14685 f3b2605a-c512-4ea7…
b6e19b78037b
·sjplimp on Feb 26 2016, 16:55.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
2702d94cfd5e
·Axel Kohlmeyer on Feb 26 2016, 12:35.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14680 f3b2605a-c512-4ea7…
37810ba27182
·sjplimp on Feb 26 2016, 00:57.
Enabled triclinic cells
737c083a4f3f
·athomps on Feb 26 2016, 00:12.

Feb 25 2016

Kokkos: support overlapping host device calculation commit 6
9df1b66d1e14
·crtrott on Feb 25 2016, 23:18.
Kokkos: support overlapping host device calculation commit 5
8aecc2baed13
·crtrott on Feb 25 2016, 22:10.
Kokkos: support overlapping host device calculation commit 4
a9452c807f85
·crtrott on Feb 25 2016, 22:08.
Kokkos: support overlapping host device calculation commit 3
f3716023e16a
·crtrott on Feb 25 2016, 22:06.
Kokkos: support overlapping host device calculation commit 1
2b2c4755c84e
·crtrott on Feb 25 2016, 21:20.
Kokkos: support overlapping host device calculation commit 1
46be84ff1fa5
·crtrott on Feb 25 2016, 21:19.
KOKKOS: fixing clang compiler issues
2aebaf5d45e7
·crtrott on Feb 25 2016, 20:52.
Merge remote-tracking branch 'main/master'
2a288504ddbd
·crtrott on Feb 25 2016, 20:35.
Merge remote branch 'lammps-ro/master' into lammps-icms
05fe174d76cb
·Axel Kohlmeyer on Feb 25 2016, 17:39.

Feb 24 2016

Fixing USER-CUDA compile error
b5e95a0a14c6
·stamoor on Feb 24 2016, 19:53.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14672 f3b2605a-c512-4ea7…
a4e33d30969a
·sjplimp on Feb 24 2016, 00:22.

Feb 23 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
dee858771a82
·Axel Kohlmeyer on Feb 23 2016, 14:47.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14669 f3b2605a-c512-4ea7…
e0361bb7a5e8
·sjplimp on Feb 23 2016, 00:30.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14666 f3b2605a-c512-4ea7…
a7b85690d13e
·sjplimp on Feb 23 2016, 00:27.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14665 f3b2605a-c512-4ea7…
c200e187b53b
·sjplimp on Feb 23 2016, 00:18.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14664 f3b2605a-c512-4ea7…
577af878eaf4
·sjplimp on Feb 23 2016, 00:14.

Feb 22 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14661 f3b2605a-c512-4ea7…
dc0dc5a7d9e7
·sjplimp on Feb 22 2016, 23:13.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14660 f3b2605a-c512-4ea7…
d2d5b0cb7501
·sjplimp on Feb 22 2016, 22:57.
Update fix_adapt.cpp (and doc) to work with scalars
fd9b346d2482
·Ryan S. Elliott on Feb 22 2016, 22:20.
Updates to pair_kim to support hybrid and fix_adapt
ab005ce59929
·Ryan S. Elliott on Feb 22 2016, 22:06.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14659 f3b2605a-c512-4ea7…
00fc71e8b8ab
·sjplimp on Feb 22 2016, 18:10.

Feb 19 2016

Merge branch 'merge-pull-27' into icms-merge
dc412f0f4d0f
·Axel Kohlmeyer on Feb 19 2016, 17:00.
Merge branch 'make-fixes' of https://github.com/twhitehead/lammps into merge…
5d1bca0cfc2c
·Axel Kohlmeyer on Feb 19 2016, 16:56.
Merge remote branch 'lammps-ro/master' into lammps-icms
b4b1c4c1518c
·Axel Kohlmeyer on Feb 19 2016, 12:27.

Feb 18 2016

MAKE: use copy to copy input lists as handles None for us
8325221000dc
·Tyson Whitehead on Feb 18 2016, 23:32.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14656 f3b2605a-c512-4ea7…
5c78508b40bf
·sjplimp on Feb 18 2016, 23:31.
MAKE: use capitalize() function instead of doing it manually
449a192d1b00
·Tyson Whitehead on Feb 18 2016, 23:25.
MAKE: Actions didn't always produce lib, file, clean, exe order
e4789506c260
·Tyson Whitehead on Feb 18 2016, 23:12.
MAKE: cut and paste error whereby output was Makefile class
fe47afd0c768
·Tyson Whitehead on Feb 18 2016, 22:42.
MAKE: accepted "standard" but didn't affect final package list
3cd652b81fdc
·Tyson Whitehead on Feb 18 2016, 22:39.
fix output segfault bug in comb3 reported on lammps-users
3d9610116ca1
·Axel Kohlmeyer on Feb 18 2016, 16:55.

Feb 17 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14655 f3b2605a-c512-4ea7…
e4ea9c065801
·sjplimp on Feb 17 2016, 16:56.
Merge remote branch 'lammps-ro/master' into lammps-icms
685ae65b02ff
·Axel Kohlmeyer on Feb 17 2016, 13:14.
Fixing Kokkos bug
2ad23266fb20
·stamoor on Feb 17 2016, 00:13.

Feb 16 2016

Fixing Kokkos bug
1a1b81cb8f9b
·stamoor on Feb 16 2016, 22:52.
fix typo that broke serial builds on Travis CI
fc16dfa5a6b6
·Axel Kohlmeyer on Feb 16 2016, 13:13.
restore changes that got lost in steve's update/release frenzy
5d8b76211ad3
·Axel Kohlmeyer on Feb 16 2016, 12:48.
Merge remote branch 'lammps-ro/master' into lammps-icms
1d9d6f924170
·Axel Kohlmeyer on Feb 16 2016, 12:44.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14638 f3b2605a-c512-4ea7…
1abf6d03bc33
·sjplimp on Feb 16 2016, 00:15.

Feb 15 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14633 f3b2605a-c512-4ea7…
53b3a4aec002
·sjplimp on Feb 15 2016, 23:35.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14631 f3b2605a-c512-4ea7…
21136ae10745
·sjplimp on Feb 15 2016, 23:27.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14630 f3b2605a-c512-4ea7…
490b26ed0643
·sjplimp on Feb 15 2016, 23:27.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14621 f3b2605a-c512-4ea7…
384d5103dd30
·sjplimp on Feb 15 2016, 19:37.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14604 f3b2605a-c512-4ea7…
9d46c0b93860
·sjplimp on Feb 15 2016, 17:19.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14602 f3b2605a-c512-4ea7…
468ef144d450
·sjplimp on Feb 15 2016, 17:10.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14598 f3b2605a-c512-4ea7…
3db8850f0992
·sjplimp on Feb 15 2016, 16:47.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14596 f3b2605a-c512-4ea7…
d615b660c1bd
·sjplimp on Feb 15 2016, 16:33.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14595 f3b2605a-c512-4ea7…
e813620f2406
·sjplimp on Feb 15 2016, 16:32.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14594 f3b2605a-c512-4ea7…
4e42c28f66e9
·sjplimp on Feb 15 2016, 16:32.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14589 f3b2605a-c512-4ea7…
70aa37e4c852
·sjplimp on Feb 15 2016, 16:26.
fix typos: pacakge -> package
872c75754fce
·Axel Kohlmeyer on Feb 15 2016, 06:23.

Feb 12 2016

skip angleangle() terms for class2 impropers, if all coefficients are zero.
07e56372cb95
·Axel Kohlmeyer on Feb 12 2016, 19:53.
Merge remote branch 'lammps-ro/master' into lammps-icms
9a4a5cd799c6
·Axel Kohlmeyer on Feb 12 2016, 13:44.

Feb 11 2016

Adding Kokkos error check
ce579ea42eea
·stamoor on Feb 11 2016, 17:42.
Adding Kokkos error check
707dee68c9d1
·stamoor on Feb 11 2016, 17:40.
Adding Kokkos error check
7a5587d65ecb
·stamoor on Feb 11 2016, 16:43.
Merge remote branch 'lammps-ro/master' into lammps-icms
aa90ff982f05
·Axel Kohlmeyer on Feb 11 2016, 13:23.
Fixing Kokkos bug
e2117af23f5e
·stamoor on Feb 11 2016, 00:34.

Feb 10 2016

Fixing Kokkos bug
b6be86264fea
·stamoor on Feb 10 2016, 23:50.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14583 f3b2605a-c512-4ea7…
ea12e28c6d5d
·sjplimp on Feb 10 2016, 16:02.

Feb 9 2016

Merge remote branch 'lammps-ro/master' into lammps-icms
6ed1f1df2f87
·Axel Kohlmeyer on Feb 9 2016, 13:56.

Feb 8 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14582 f3b2605a-c512-4ea7…
9e20448834a5
·sjplimp on Feb 8 2016, 17:18.

Feb 6 2016

integrate USER-VTK into make process
5fa36ebf0052
·Axel Kohlmeyer on Feb 6 2016, 15:24.
remove unused variables
51c768af7fae
·Axel Kohlmeyer on Feb 6 2016, 15:03.
Merge remote branch 'lammps-ro/master' into lammps-icms
534f72de2c45
·Axel Kohlmeyer on Feb 6 2016, 14:23.

Feb 5 2016

Fixing Kokkos bugs
da41fcb74b9a
·stamoor on Feb 5 2016, 18:40.
Fixing Kokkos bugs
384aef438132
·stamoor on Feb 5 2016, 18:28.
Merge remote branch 'lammps-ro/master' into lammps-icms
22568e3194d9
·Axel Kohlmeyer on Feb 5 2016, 13:55.

Feb 4 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14555 f3b2605a-c512-4ea7…
753429e654b9
·sjplimp on Feb 4 2016, 22:09.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14552 f3b2605a-c512-4ea7…
b2d417f5d722
·sjplimp on Feb 4 2016, 21:39.
Merge remote branch 'lammps-ro/master' into lammps-icms
15822b0927cc
·Axel Kohlmeyer on Feb 4 2016, 14:11.

Feb 3 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14547 f3b2605a-c512-4ea7…
21ee4aa97413
·sjplimp on Feb 3 2016, 22:57.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14542 f3b2605a-c512-4ea7…
de6ff01ba7e9
·sjplimp on Feb 3 2016, 22:33.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14534 f3b2605a-c512-4ea7…
8e9f616a2e56
·sjplimp on Feb 3 2016, 21:55.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14533 f3b2605a-c512-4ea7…
3e9a18b5bb7b
·sjplimp on Feb 3 2016, 21:53.

Feb 1 2016

Add missing initializers in constructor
3f859c20f861
·Richard Berger on Feb 1 2016, 23:43.

Jan 31 2016

Merge branch 'user-vtk' of git://github.com/rbberger/lammps into merge-pull-24
70599efcf368
·Axel Kohlmeyer on Jan 31 2016, 14:16.

Jan 30 2016

Remove lines from USER-VTK README
27f0e050a89d
·Richard Berger on Jan 30 2016, 23:13.
Merge branch 'user-vtk' of git://github.com/rbberger/lammps into merge-pull-23
37500f918927
·Axel Kohlmeyer on Jan 30 2016, 18:38.
Merge remote-tracking branch 'upstream/lammps-icms' into user-vtk
d8c3c99f546e
·Richard Berger on Jan 30 2016, 17:48.