Diffusion lammps (lammm-devel) History

KOKKOS
lammm-devel9e272cb393fdce5697267a2…

Jan 13 2017

support for eatom and vatom in pair_table_rx_kokkos
a42a666142cd
·Dan Ibanez on Jan 13 2017, 21:23.
Adding initial versions of pair_hybrid_kokkos and pair_hybrid_overlay_kokkos
2a35fa7a4e25
·Stan Moore on Jan 13 2017, 18:37.
Fixing issue in pair_multi_lucy_rx_kokkos found by ibaned
c15d6580da41
·Stan Moore on Jan 13 2017, 18:01.

Jan 12 2017

remove more leftover code
cce10f6dff0d
·Dan Ibanez on Jan 12 2017, 22:19.
remove leftover code
4dab6737ba59
·Dan Ibanez on Jan 12 2017, 22:15.
cleanup changes to Install.sh
0c3b9426862c
·Dan Ibanez on Jan 12 2017, 21:50.
put pair_lj_coul in kokkos_type.h
c94030d96631
·Dan Ibanez on Jan 12 2017, 21:37.

Jan 11 2017

it compiles.
52761aee0dc0
·Dan Ibanez on Jan 11 2017, 21:18.
lots of work towards compiling
5dcbbba4ce53
·Dan Ibanez on Jan 11 2017, 21:15.
near trying to compile
fdb6b91e2916
·Dan Ibanez on Jan 11 2017, 20:50.
progress converting compute_style
41804ff52464
·Dan Ibanez on Jan 11 2017, 20:42.
made compute_fpair a free function as well
c2bb20e60f83
·Dan Ibanez on Jan 11 2017, 19:54.
starting to separate compute_item from the class
cb9fdf7801be
·Dan Ibanez on Jan 11 2017, 19:44.
made MixingWeights code non-member
b5ff41f5efed
·Dan Ibanez on Jan 11 2017, 19:10.
tracking down some invalid reads...
6a9a0e8c334f
·Dan Ibanez on Jan 11 2017, 17:25.
fix a CUDA constructor warning
9f4e5e06616c
·Dan Ibanez on Jan 11 2017, 17:11.
make everything public to appease NVCC
d65676e981bd
·Dan Ibanez on Jan 11 2017, 00:08.

Jan 10 2017

copy uCG and uCGnew correctly
55aa91be6b88
·Dan Ibanez on Jan 10 2017, 23:28.
fix class name in PAIR_CLASS setup
5d5751be190b
·Dan Ibanez on Jan 10 2017, 23:28.
fix compilation
e4673d7fa80b
·Dan Ibanez on Jan 10 2017, 23:28.
progress towards custom compute functor
c877c07491e3
·Dan Ibanez on Jan 10 2017, 23:28.
draft compute_fpair for PairTableRXKokkos
4d5abe64d5ce
·Dan Ibanez on Jan 10 2017, 23:28.
added coeff, settings, single, fix compile
afbc6fc628b6
·Dan Ibanez on Jan 10 2017, 23:28.
add member variables from PairTableRX
21cde6261aa4
·Dan Ibanez on Jan 10 2017, 23:28.
starting to add getMixingWeights
f995bb43355f
·Dan Ibanez on Jan 10 2017, 23:28.
restarting PairTableRXKokkos
6abefe7ef956
·Dan Ibanez on Jan 10 2017, 23:28.
fix race condition on rho
d26f1403cdb7
·Dan Ibanez on Jan 10 2017, 23:22.

Jan 9 2017

Merge branch 'master' as of patch 6Jan17 into USER-DPD_kokkos
26d50853e96c
·Tim Mattox on Jan 9 2017, 19:12.

Jan 6 2017

Merge pull request #324 from ibaned/pair-table-kokkos-inherit
63f202501b27
·sjplimp / GitHub on Jan 6 2017, 18:10.
Merge pull request #314 from stanmoore1/fix-momentum-kokkos
467377094aad
·sjplimp / GitHub on Jan 6 2017, 18:01.
Merge pull request #313 from stanmoore1/kokkos_bugfixes
5656e90b7882
·sjplimp / GitHub on Jan 6 2017, 18:00.
pair TIP4P bug fix for cutoffs >> box size
f6a819580c6b
·Steve Plimpton on Jan 6 2017, 17:57.

Jan 5 2017

fix several GPU memory bugs in pair_table_kokkos
53a1de1d4081
·Dan Ibanez / Dan Ibanez on Jan 5 2017, 23:38.
fix crash in create_kokkos_tables
d059b5d3344f
·Dan Ibanez / Dan Ibanez on Jan 5 2017, 23:38.
fix allocation regressions in PairTableKokkos
7cff343680ce
·Dan Ibanez on Jan 5 2017, 23:38.
PairTableKokkos : public PairTable
a1ac86108494
·Dan Ibanez on Jan 5 2017, 23:38.
try PairTableKokkos : public PairTable
17bdb57bb469
·Dan Ibanez on Jan 5 2017, 23:38.
fix many warnings in pair_dpd_fdt_energy_kokkos
19f2d2d1ecb1
·Dan Ibanez / Dan Ibanez on Jan 5 2017, 23:34.

Jan 4 2017

fix warning about enum comparisons
4cfe122ac692
·Dan Ibanez / Stan Moore on Jan 4 2017, 16:10.
Merge pull request #5 from ibaned/kokkos-fixes
b46629ee39f2
·Stan Moore / GitHub on Jan 4 2017, 16:06.

Jan 3 2017

prevent implicit dereference of s_CTEMP
a7c5905ca4ec
·Dan Ibanez on Jan 3 2017, 23:17.
Merge branch 'USER-DPD_kokkos_updates' into USER-DPD_kokkos
b5c7d442992d
·Stan Moore on Jan 3 2017, 20:35.
Merge pull request #4 from ibaned/dpd-fixes
fe3c98cdbb2b
·Tim Mattox / GitHub on Jan 3 2017, 20:29.
Updating pair_multi_lucy_rx_kokkos to USER-DPD changes
ae0e882cde4c
·Stan Moore on Jan 3 2017, 19:51.
member function containing lambdas must be public
6d7607a6ade5
·Dan Ibanez on Jan 3 2017, 19:50.
remove syncs that shouldn't be needed
e3ebd8e7f179
·Dan Ibanez / Dan Ibanez on Jan 3 2017, 19:50.
place newline at end of file
dae132c77099
·Dan Ibanez / Dan Ibanez on Jan 3 2017, 19:42.
fix warning about enum comparisons
e632f8597ac7
·Dan Ibanez / Dan Ibanez on Jan 3 2017, 19:42.
got fix_dpd_energy_kokkos to compile
89795b3653ea
·Dan Ibanez / Dan Ibanez on Jan 3 2017, 19:41.
first draft fix_dpd_energy_kokkos
04e2f170a33c
·Dan Ibanez / Dan Ibanez on Jan 3 2017, 19:41.
save draft of fix_dpd_energy_kokkos.cpp
53e07996c692
·Dan Ibanez / Dan Ibanez on Jan 3 2017, 19:41.
draft fix_dpd_energy_kokkos.h
66cdd3a708b9
·Dan Ibanez / Dan Ibanez on Jan 3 2017, 19:41.
LAMMPS_LAMBDA from ibaned/lammps@7559bc9
ccaa0506cb93
·Dan Ibanez / Dan Ibanez on Jan 3 2017, 19:41.
Updating pair_exp6_rx_kokkos to USER-DPD changes
f220b07625b7
·Stan Moore on Jan 3 2017, 18:36.
Updating fix_eos_table_rx_kokkos to USER-DPD changes
2af10cb8da9b
·Stan Moore on Jan 3 2017, 18:09.

Dec 28 2016

Disallowing full neighborlist for pair_tersoff_kokkos styles until a bugfix is…
eca9539f84f7
·Stan Moore / Stan Gerald Moore (stamoor) on Dec 28 2016, 18:59.
Fixing Kokkos bug when many atom types
27172c4a553b
·Stan Moore / Stan Gerald Moore (stamoor) on Dec 28 2016, 18:59.
Fixing bug with Kokkos and reading restart files
4f195254af35
·Stan Moore / Stan Gerald Moore (stamoor) on Dec 28 2016, 18:59.
rename region_block_kokkos inside()
9a0007a13f43
·Dan Ibanez / Stan Gerald Moore (stamoor) on Dec 28 2016, 18:56.
silence "implicit dereference" warning
994f36bc6f8b
·Dan Ibanez / Stan Gerald Moore (stamoor) on Dec 28 2016, 18:56.
add missing return in comm_tiled_kokkos
b3557bfbf50f
·Dan Ibanez / Stan Gerald Moore (stamoor) on Dec 28 2016, 18:55.
repair sync bugs in fix_momentum_kokkos
371df8ea72d6
·Dan Ibanez / Stan Gerald Moore (stamoor) on Dec 28 2016, 18:51.
ensure velocity is marked as modified before syncing
06ae2804f6c2
·Dan Ibanez / Stan Gerald Moore (stamoor) on Dec 28 2016, 18:51.

Dec 23 2016

Merging USER-DPD updates
cc1b55e0310a
·Stan Moore on Dec 23 2016, 20:36.

Dec 22 2016

Temporarily reverting change to pair_table_kokkos to allow runtime testing
a36e563aa56e
·Stan Moore on Dec 22 2016, 22:37.
CPU runtime tested version of pair_multi_lucy_rx_kokkos
f6fe61196da6
·Stan Moore on Dec 22 2016, 19:34.

Dec 21 2016

Removing pair_table_rx_kokkos from Kokkos Install.sh since it isn't ready for…
163b61a32eff
·Stan Moore on Dec 21 2016, 23:37.
need to sync new velocities back to host
ae8d882b0302
·Dan Ibanez on Dec 21 2016, 18:57.
Fixing issues found during GPU runtime testing
807d9529da32
·Stan Moore on Dec 21 2016, 18:41.
workaround CUDA View::reference_type
7559bc9c5f25
·Dan Ibanez on Dec 21 2016, 18:21.
allow constructing Few from array on device
f3327ca214c6
·Dan Ibanez on Dec 21 2016, 17:21.
Fixing Kokkos issue in fix_eos_table_rx_kokkos
73326922d67c
·Stan Moore on Dec 21 2016, 16:56.
allow fix momentum angular with CUDA
54963ba7da9b
·Dan Ibanez on Dec 21 2016, 16:55.
CUDA-friendly fix_momentum_kokkos angular
ea76041803b9
·Dan Ibanez on Dec 21 2016, 16:54.
draft CUDA-callable version of Domain::unmap
7fb4faa4392e
·Dan Ibanez on Dec 21 2016, 16:53.
allow constructing Few from C array
41c9357ddea6
·Dan Ibanez on Dec 21 2016, 16:53.
get fix_momentum_kokkos to compile on White
d9a0f575f6ce
·Dan Ibanez on Dec 21 2016, 16:01.
put Few in the global namespace...
01e3a316395d
·Dan Ibanez on Dec 21 2016, 16:01.
silence warning about partial x2lamda overload
992becc75fea
·Dan Ibanez on Dec 21 2016, 16:00.
Fixing issues found during GPU runtime testing
35803c75c970
·Stan Moore on Dec 21 2016, 01:03.
start working on fix_momentum Kokkos+CUDA
b2b33cca16aa
·Dan Ibanez on Dec 21 2016, 00:30.
install kokkos_few, and remove Int
2ceee6b9be3a
·Dan Ibanez on Dec 21 2016, 00:19.
start porting my Few class into this code
386c12c970c1
·Dan Ibanez on Dec 21 2016, 00:09.

Dec 20 2016

fix_momentum_kokkos: don't override init()
590f31755091
·Dan Ibanez on Dec 20 2016, 19:03.
Renaming rand_pool_wrap to rand_pool_wrap_kokkos
f62a6fe5a55d
·Stan Moore on Dec 20 2016, 00:50.
Fixing issues in pair_multi_lucy_rx_kokkos
6f51c3b75c49
·Stan Moore on Dec 20 2016, 00:25.

Dec 19 2016

Adding CPU runtime tested version of pair_dpd_fdt_energy_kokkos
99910fc43241
·Stan Moore on Dec 19 2016, 23:27.
Porting recent changes from USER-DPD package to KOKKOS package
21bb603b9318
·Stan Moore on Dec 19 2016, 21:30.
preemptive changes for Kokkos+CUDA
c7ac9e79cb9e
·Dan Ibanez on Dec 19 2016, 21:17.
got fix_momentum_kokkos to compile
ca30c1ec8850
·Dan Ibanez on Dec 19 2016, 21:08.
draft the parallel_* constructs based on lambdas
a1b441a71fa7
·Dan Ibanez on Dec 19 2016, 20:02.
first draft
f6f2170369e9
·Dan Ibanez on Dec 19 2016, 19:28.

Dec 16 2016

Fixing runtime issues in fix_eos_table_rx_kokkos
cfa61b98aec5
·Stan Moore on Dec 16 2016, 20:37.
Fixing runtime issues with pair_exp6_rx_kokkos
d93e3d1cee93
·Stan Moore on Dec 16 2016, 18:06.
Fixing Kokkos memory deallocation issue
f47a40b2e4ea
·Stan Moore on Dec 16 2016, 18:02.

Dec 15 2016

Adding Kokkos version of fix_property_atom
a3c1d385e84a
·Stan Moore on Dec 15 2016, 23:50.
Updates to Kokkos files
c0d6cbbdd3f1
·Stan Moore on Dec 15 2016, 19:18.

Dec 14 2016

Updates to Kokkos files
a9d26b3f4aad
·Stan Moore on Dec 14 2016, 20:58.
Merging from master to 13Dec16 version
3e2cd6d265db
·Stan Moore on Dec 14 2016, 19:46.
Merge branch 'master' into USER-DPD_kokkos
d47c6b276105
·Stan Moore on Dec 14 2016, 19:25.

lammps/src/KOKKOSlammm-devel9e272cb393fdce5697267a2…

Jan 13 2017

Jan 12 2017

Jan 11 2017

Jan 10 2017

Jan 9 2017

Jan 6 2017

Jan 5 2017

Jan 4 2017

Jan 3 2017

Dec 28 2016

Dec 23 2016

Dec 22 2016

Dec 21 2016

Dec 20 2016

Dec 19 2016

Dec 16 2016

Dec 15 2016

Dec 14 2016

lammps/src/KOKKOS
lammm-devel9e272cb393fdce5697267a2…