Diffusion lammps (lammm-master-deprecated) History

src
lammm-master-deprecated0569c3880975a08bab8fb71…

Sep 6 2016

Made documentation and code of last commit more legible
1ce11d2227f0
·Efrem Braun on Sep 6 2016, 21:23.

Sep 5 2016

added in option to compute_bond_local to calculate bond velocities and kinetic…
245c70e91686
·Efrem Braun on Sep 5 2016, 23:42.

Sep 2 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
222e9de4c889
·Axel Kohlmeyer on Sep 2 2016, 15:02.

Sep 1 2016

Adding Kokkos version of PPPM
a4914bc9d80d
·stamoor on Sep 1 2016, 23:01.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
214494477854
·Axel Kohlmeyer on Sep 1 2016, 12:24.
chunk doc pages
3769f9077f4a
·sjplimp on Sep 1 2016, 03:58.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15532 f3b2605a-c512-4ea7…
f94bbc0de05e
·sjplimp on Sep 1 2016, 00:21.

Aug 31 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15529 f3b2605a-c512-4ea7…
bcb2e6dd380c
·sjplimp on Aug 31 2016, 23:10.
sync with Git
93c6c26b8396
·sjplimp on Aug 31 2016, 23:08.
small bug fixes
083ff54c0c51
·sjplimp on Aug 31 2016, 22:26.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15525 f3b2605a-c512-4ea7…
8f6439843d6b
·sjplimp on Aug 31 2016, 21:25.

Aug 28 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
dd3b0bfffd0e
·Axel Kohlmeyer on Aug 28 2016, 12:42.
Update documentation for tabulation in vashista pair style
39cec5cc191e
·Axel Kohlmeyer on Aug 28 2016, 05:01.
sync with Git
236241b10085
·sjplimp on Aug 28 2016, 01:09.
updated USER-MANIFOLD doc pages
57b24b566867
·sjplimp on Aug 28 2016, 01:07.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15514 f3b2605a-c512-4ea7…
fc4e63130cf8
·sjplimp on Aug 28 2016, 00:41.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15510 f3b2605a-c512-4ea7…
571489062727
·sjplimp on Aug 28 2016, 00:40.
new fix flow/gauss command
90e6032f973d
·sjplimp on Aug 28 2016, 00:18.

Aug 25 2016

Merge branch 'update-doc-user-manifold' of https://github.
8fa75760e419
·Axel Kohlmeyer on Aug 25 2016, 05:33.
fix typo in compute omega/chunk usage example
c71ffcfcc0e6
·Axel Kohlmeyer on Aug 25 2016, 05:30.
Merge branch 'merge-pull-140' into lammps-icms
998fa338f1cb
·Axel Kohlmeyer on Aug 25 2016, 00:15.

Aug 24 2016

Small update for USER-MANIFOLD docs.
d188bdbd8610
·Stefan Paquay on Aug 24 2016, 15:03.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
57fb84393a7a
·Axel Kohlmeyer on Aug 24 2016, 13:49.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15492 f3b2605a-c512-4ea7…
662335db13fd
·sjplimp on Aug 24 2016, 00:44.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15489 f3b2605a-c512-4ea7…
7bf1d9b40fe1
·sjplimp on Aug 24 2016, 00:17.

Aug 23 2016

Merge branch 'fix_bond_create_update' of https://github.com/aminaramoon/lammps…
62eeed768bde
·Axel Kohlmeyer on Aug 23 2016, 21:47.
Merge branch 'add-fix-gaussFlow' of https://github.com/sstrong99/lammps into…
d08e79702603
·Axel Kohlmeyer on Aug 23 2016, 19:18.
revised fix_flow_gauss
c1a6d2ec30dc
·Steven Strong on Aug 23 2016, 18:23.
revised fix_flow_gauss
5a5a10c75ff5
·Steven Strong on Aug 23 2016, 17:46.
doc revisited
5798ba9e57e1
·aaramoon on Aug 23 2016, 16:59.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
c90f3a800fba
·Axel Kohlmeyer on Aug 23 2016, 13:19.
update colvars library to version 2016-08-19
c67326be6d93
·Axel Kohlmeyer on Aug 23 2016, 11:53.
fixed integer division problem in python code snippet
55fe1f6b29cc
·athomps on Aug 23 2016, 00:35.

Aug 22 2016

Added fix_gaussflow
95755ba8b2e9
·Steven Strong on Aug 22 2016, 23:47.

Aug 21 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
ebbed707c6cf
·Axel Kohlmeyer on Aug 21 2016, 17:00.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15484 f3b2605a-c512-4ea7…
2fff78a78eb2
·sjplimp on Aug 21 2016, 00:43.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15482 f3b2605a-c512-4ea7…
ccf8cf20b378
·sjplimp on Aug 21 2016, 00:42.

Aug 17 2016

fix_bond_create_updated
180776e4f702
·aaramoon on Aug 17 2016, 16:12.

Aug 15 2016

thread timing summare needs to be marked as preformatted
b745636a6760
·Axel Kohlmeyer on Aug 15 2016, 04:01.

Aug 14 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
27d36f3f145b
·Axel Kohlmeyer on Aug 14 2016, 12:15.

Aug 13 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15475 f3b2605a-c512-4ea7…
832f6a9f1125
·sjplimp on Aug 13 2016, 16:52.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
e338a2f38619
·Axel Kohlmeyer on Aug 13 2016, 12:54.

Aug 12 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15471 f3b2605a-c512-4ea7…
c03252f08da0
·sjplimp on Aug 12 2016, 16:34.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15469 f3b2605a-c512-4ea7…
112c98159b1c
·sjplimp on Aug 12 2016, 15:49.

Aug 10 2016

update colvars to version 2016-08-10
f2ddf828e485
·Axel Kohlmeyer on Aug 10 2016, 15:03.

Aug 9 2016

change pair_coeff syntax for lj/sf/dipole/sf to be backward compatible and…
0369d79c398a
·Axel Kohlmeyer on Aug 9 2016, 16:28.
Merge branch 'balance-doc-fix' of https://github.com/ibethune/lammps into merge…
e55875a5a485
·Axel Kohlmeyer on Aug 9 2016, 15:25.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
96e415ad8af4
·Axel Kohlmeyer on Aug 9 2016, 13:01.

Aug 8 2016

Fix typo
3b8ecd5c0634
·Iain Bethune on Aug 8 2016, 15:55.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15460 f3b2605a-c512-4ea7…
17e8e9a9c98d
·sjplimp on Aug 8 2016, 15:48.

Aug 7 2016

update colvars library to version 2016-08-05
459db2eb6b7b
·Axel Kohlmeyer on Aug 7 2016, 15:54.
update documentation for refactored load-balancing
7abc061bf7b4
·Axel Kohlmeyer on Aug 7 2016, 05:31.

Aug 6 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
78b47137ba70
·Axel Kohlmeyer on Aug 6 2016, 13:22.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15456 f3b2605a-c512-4ea7…
0029040f1152
·sjplimp on Aug 6 2016, 00:12.

Aug 5 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15454 f3b2605a-c512-4ea7…
30d60075655c
·sjplimp on Aug 5 2016, 22:45.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15452 f3b2605a-c512-4ea7…
9a3b988b2b8e
·sjplimp on Aug 5 2016, 20:28.
Attempted to straighten out italics
36a0c644a906
·athomps on Aug 5 2016, 20:21.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15450 f3b2605a-c512-4ea7…
96a73d51cd98
·sjplimp on Aug 5 2016, 20:16.
clarified energy contribution to minimization energy
32c8c9d63e4e
·athomps on Aug 5 2016, 18:27.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15445 f3b2605a-c512-4ea7…
754103324663
·sjplimp on Aug 5 2016, 17:50.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15442 f3b2605a-c512-4ea7…
ce7581b86932
·sjplimp on Aug 5 2016, 17:38.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15439 f3b2605a-c512-4ea7…
82a29a8adbfe
·sjplimp on Aug 5 2016, 17:14.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15438 f3b2605a-c512-4ea7…
091fb71a9312
·sjplimp on Aug 5 2016, 17:14.

Aug 4 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
ad0633f7c142
·Axel Kohlmeyer on Aug 4 2016, 12:56.

Aug 3 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15432 f3b2605a-c512-4ea7…
677da2ea52d9
·sjplimp on Aug 3 2016, 21:40.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15427 f3b2605a-c512-4ea7…
a6ade15e60bb
·sjplimp on Aug 3 2016, 18:29.

Aug 2 2016

update to colvars library version 2016-08-01
81b83331090b
·Axel Kohlmeyer on Aug 2 2016, 21:17.
minor tweaks and comment fixes
f14e9cee83da
·Axel Kohlmeyer on Aug 2 2016, 13:32.
whitespace cleanup
2e0b9cae2980
·Axel Kohlmeyer on Aug 2 2016, 12:41.
Merge branch 'lammps-icms' into balance-by-time
b635930cfd98
·Axel Kohlmeyer on Aug 2 2016, 12:33.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
cc487af9e494
·Axel Kohlmeyer on Aug 2 2016, 12:20.
implement wall clock based load balancing cost function support
2a57dc6db460
·Axel Kohlmeyer on Aug 2 2016, 07:17.
undo changes to the group command related to load balancing
047f313356ba
·Axel Kohlmeyer on Aug 2 2016, 01:06.
update documentation according to the modified implementation based on iain…
76b8bbca8ea8
·Axel Kohlmeyer on Aug 2 2016, 00:59.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15423 f3b2605a-c512-4ea7…
56502c7c0943
·sjplimp on Aug 2 2016, 00:57.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15420 f3b2605a-c512-4ea7…
1cdd1fd4f809
·sjplimp on Aug 2 2016, 00:43.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15419 f3b2605a-c512-4ea7…
69513a29ab6a
·sjplimp on Aug 2 2016, 00:40.

Aug 1 2016

Merge branch 'weighted_load_balance' of https://github.com/ibethune/lammps into…
aaac40dcb4d8
·Axel Kohlmeyer on Aug 1 2016, 21:46.

Jul 31 2016

correct typo
11f772969f88
·Axel Kohlmeyer on Jul 31 2016, 12:55.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
1d17eed48ca5
·Axel Kohlmeyer on Jul 31 2016, 12:54.

Jul 30 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15409 f3b2605a-c512-4ea7…
5b5f839265b4
·sjplimp on Jul 30 2016, 18:08.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15406 f3b2605a-c512-4ea7…
f9c6ec768b49
·sjplimp on Jul 30 2016, 17:11.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15404 f3b2605a-c512-4ea7…
fb13763ef91d
·sjplimp on Jul 30 2016, 16:52.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
94b4702bb1b3
·Axel Kohlmeyer on Jul 30 2016, 13:55.

Jul 29 2016

Docs for load balance changes
fc7afc2242f2
·Iain Bethune on Jul 29 2016, 17:35.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15397 f3b2605a-c512-4ea7…
f609827de85b
·sjplimp on Jul 29 2016, 16:35.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15394 f3b2605a-c512-4ea7…
642c01a15088
·sjplimp on Jul 29 2016, 16:32.

Jul 28 2016

update min_style docs about the limitations in hftn minimizer
f13ff2e1351f
·Axel Kohlmeyer on Jul 28 2016, 23:15.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15388 f3b2605a-c512-4ea7…
70bfc1c0979a
·sjplimp on Jul 28 2016, 15:52.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
34d5c29bf50b
·Axel Kohlmeyer on Jul 28 2016, 12:40.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15382 f3b2605a-c512-4ea7…
e561aa052909
·sjplimp on Jul 28 2016, 01:34.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15378 f3b2605a-c512-4ea7…
a91dae3f2b81
·sjplimp on Jul 28 2016, 01:26.
Added axes keyword
5241c0326e4b
·athomps on Jul 28 2016, 01:03.

Jul 27 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15370 f3b2605a-c512-4ea7…
c1fc5aef12fa
·sjplimp on Jul 27 2016, 16:08.
rename dlm option to dipole/dlm and turn on dipole flag with it as well
671ca115f9d0
·Axel Kohlmeyer on Jul 27 2016, 13:56.
Doc updates for fix_nh (alongside existing update dipole keyword)
9b9c3416c6a8
·Iain Bethune on Jul 27 2016, 10:54.
Add reference
6e050e243d39
·Iain Bethune on Jul 27 2016, 10:50.
Update doc for nve/sphere
b99f255eed4f
·Iain Bethune on Jul 27 2016, 10:40.

Jul 23 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
01881e6fcc2d
·Axel Kohlmeyer on Jul 23 2016, 12:28.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15362 f3b2605a-c512-4ea7…
caf9483a0a7c
·sjplimp on Jul 23 2016, 01:05.

lammps/doc/srclammm-master-deprecated0569c3880975a08bab8fb71…

Sep 6 2016

Sep 5 2016

Sep 2 2016

Sep 1 2016

Aug 31 2016

Aug 28 2016

Aug 25 2016

Aug 24 2016

Aug 23 2016

Aug 22 2016

Aug 21 2016

Aug 17 2016

Aug 15 2016

Aug 14 2016

Aug 13 2016

Aug 12 2016

Aug 10 2016

Aug 9 2016

Aug 8 2016

Aug 7 2016

Aug 6 2016

Aug 5 2016

Aug 4 2016

Aug 3 2016

Aug 2 2016

Aug 1 2016

Jul 31 2016

Jul 30 2016

Jul 29 2016

Jul 28 2016

Jul 27 2016

Jul 23 2016

lammps/doc/src
lammm-master-deprecated0569c3880975a08bab8fb71…