Diffusion µSpectre (18_OSX_fixes) History

History
18_OSX_fixes9137a5a94322394b6eece4e…

Mar 16 2018

Made the communicator effc++ compatible
9137a5a94322
·junge on Mar 16 2018, 19:42.
ENH: First implementation of MPI parallelization.
fad17c728490
·D169
·junge on Mar 16 2018, 17:52.
WIP: Updated language bindings to reflect recent changes in API.
0f03cbf18341
·pastewka on Mar 16 2018, 17:23.
WIP: HAVE_MPI should have been WITH_MPI
b3d3315e59c7
·pastewka on Mar 16 2018, 17:23.
WIP: Enabled and updated MPI parallel patch test.
679cc5d1e141
·pastewka on Mar 16 2018, 16:45.
WIP: Added convenience functions to create parallel cells.
2c848fe691c0
·pastewka on Mar 16 2018, 16:45.
WIP: Added communication for reduction operations in newton_cg solver.
49ed256c1c21
·pastewka on Mar 16 2018, 16:06.
WIP: Updated FindPFFT.cmake and CMakeLists.txt.
5fbc4b9ec5ea
·pastewka on Mar 16 2018, 16:04.
WIP: Removed constexpr for get_mpi_comm
7e94129d056b
·pastewka on Mar 16 2018, 13:36.
WIP: get_index needs locations argument
c8689277da3a
·pastewka on Mar 16 2018, 13:35.

Mar 15 2018

WIP: de_geus solver converges
d10e89d0559c
·pastewka on Mar 15 2018, 22:19.
WIP: SolverCG appears to be working in parallel.
a2980762715b
·pastewka on Mar 15 2018, 22:12.
WIP: FFTEngineBase now holds the communicator object and returns it via…
a012163a1acd
·pastewka on Mar 15 2018, 12:06.

Mar 14 2018

WIP: Added missing locations argument.
82ece615f31c
·pastewka on Mar 14 2018, 22:52.
Merge branch 'master' into feat/mpi
e0d06241ed6c
·pastewka on Mar 14 2018, 22:43.
WIP: Added reduction operations to SolverCG
54fd54f58bb3
·pastewka on Mar 14 2018, 22:43.
WIP: Cosmetics.
604b3aea55c8
·pastewka on Mar 14 2018, 22:42.
WIP: Cleaned up tests.
588d8ec12963
·pastewka on Mar 14 2018, 22:11.
WIP: Pass locations to FieldCollection and Field initialisation.
d5ff24969ab5
·pastewka on Mar 14 2018, 22:10.
WIP: Need to use domain resolutions when constructing FFT frequencies.
b9f21ca7059d
·pastewka on Mar 14 2018, 22:09.
WIP: FieldCollection now stores locations.
55ceb30bb1dd
·pastewka on Mar 14 2018, 22:08.
WIP: Added rank() methode to Communicator
e811f3fd699f
·pastewka on Mar 14 2018, 22:08.
WIP: Workspace pixel initialisation in constructor.
754daaa29768
·pastewka on Mar 14 2018, 22:07.
WIP: Pass fourier_locations to Pixels constructor.
28aefceabbc5
·pastewka on Mar 14 2018, 22:06.

Mar 13 2018

WIP: Initialize resolutions in constructor.
df4c18badb4a
·pastewka on Mar 13 2018, 23:21.
WIP: get_ccoord now rewuires a locations argument
f5b715ef4d96
·pastewka on Mar 13 2018, 22:30.
WIP: Initialize norm factor with global resolution
ecf0cc137415
·pastewka on Mar 13 2018, 22:29.
WIP: hermitian resolutions are now fourier resolution and stored in the base…
2ab73bcca627
·pastewka on Mar 13 2018, 22:28.
amended the dependencies in the documenatation
3b781c4548aa
·D167
·afalsafi on Mar 13 2018, 16:37.
Fix for clang 6 and FFTW engine
6d2a10904234
·junge on Mar 13 2018, 13:53.
WIP: Replace public resize with explicit pad size information in FieldBase
b4cb16585ec0
·pastewka on Mar 13 2018, 08:36.
Revert "WIP: Made 'resize' of Field* public. MPI FFTW needs to enlarge the…
af6fe4b0838c
·pastewka on Mar 13 2018, 08:10.
WIP: 0,0 grid locations resides on one of the MPI processes only.
47ee34680901
·pastewka on Mar 13 2018, 08:06.

Mar 12 2018

WIP: Enlarge workspace buffer size.
2bc3f223ffd3
·pastewka on Mar 12 2018, 23:09.
WIP: Made 'resize' of Field* public. MPI FFTW needs to enlarge the underlying…
4c7b0a9182d0
·pastewka on Mar 12 2018, 23:08.
WIP: Pixels now knows about its (subdomain) location. Cell now knows about its…
73227f25ca34
·pastewka on Mar 12 2018, 09:53.
WIP: Updated documentation strings
ec9658d29131
·pastewka on Mar 12 2018, 09:51.

Mar 11 2018

WIP: Added locations and domain_resolutions getter
3aec5854ce6a
·pastewka on Mar 11 2018, 21:49.
WIP: Transpose pixels for local grid collection
61c29d7aa0bc
·pastewka on Mar 11 2018, 21:43.
WIP: Pixels class has now a 'transposed' template arguments, that tells it that…
69269354677a
·pastewka on Mar 11 2018, 21:42.
WIP: Added MPI projection tests.
7d0715fa3a89
·pastewka on Mar 11 2018, 15:03.
WIP: Code documentation.
5fe9ac0f30af
·pastewka on Mar 11 2018, 14:48.
WIP: Switched MPI FFT test to FFTW.
52dd54d702df
·pastewka on Mar 11 2018, 14:46.
WIP: MPI FFTW with transposed output works.
bdffe49ba820
·pastewka on Mar 11 2018, 14:46.

Mar 9 2018

WIP: MPI FFTW running on one process works.
134496a0631a
·pastewka on Mar 9 2018, 23:10.
Merge branch 'master' into feat/mpi
9e8c21080050
·pastewka on Mar 9 2018, 22:14.
WIP: Introduced temporary padded input buffer.
fe3b985a45d1
·pastewka on Mar 9 2018, 22:13.
WIP: Check whether plan has been created.
5da4c1e565f9
·pastewka on Mar 9 2018, 22:12.
Treating the headers in cmake
21380f6855fb
·D166
·richart on Mar 9 2018, 14:42.

Mar 8 2018

WIP: Apple Xcode fixes.
e04e00a7da8a
·pastewka on Mar 8 2018, 22:27.
WIP: Remove material dimension from FieldCollections in MPI test.
4c60859318c1
·pastewka on Mar 8 2018, 22:04.
WIP: FFT_Engine_base -> FFTEngineBase
d496d6dc66ef
·pastewka on Mar 8 2018, 22:02.
Merge branch 'master' into feat/mpi
da031383b328
·pastewka on Mar 8 2018, 21:59.

Mar 7 2018

WIP: MPI FFT test compiles with PFFT. No passes yet.
226e73ee26b3
·pastewka on Mar 7 2018, 22:37.
WIP: Pass engine as template parameter to fixture.
9f12c77c8f3e
·pastewka on Mar 7 2018, 22:34.
WIP: Added initial PFFT engine.
67eab82a3480
·pastewka on Mar 7 2018, 22:29.
WIP: mpi_type template specializations must be inline.
83364edb689a
·pastewka on Mar 7 2018, 22:29.
WIP: Use transposed local size planner.
2ecbb615921a
·pastewka on Mar 7 2018, 21:50.
Cleanup: FieldCollection template params and FFT engine class names
eabe0571c30f
·junge on Mar 7 2018, 21:25.
Renamed 'system' to 'cell'
a5fb8e631773
·junge on Mar 7 2018, 21:06.
WIP: µSpectre -> muSpectre
8b9802aff52a
·pastewka on Mar 7 2018, 20:39.
Merge branch 'master' into feat/internal_variables_T1831
7e681271d663
·junge on Mar 7 2018, 18:22.
Documented StateField and MaterialHyperElastoPlastic
765b0c2992fb
·branch: feat/internal_variables_T1831
·junge on Mar 7 2018, 18:03.
MaterialHyperElastoPlastic1 is tested
bd957ecc8bea
·junge on Mar 7 2018, 16:36.
DOC: Added doc strings.
dd750abedf3d
·pastewka on Mar 7 2018, 14:20.
WIP: Need to compute size over all MPI processes.
db091a2cb915
·pastewka on Mar 7 2018, 14:20.
WIP: Added more MPI datatypes.
19953a579bd8
·pastewka on Mar 7 2018, 14:19.
WIP: Have FFTWMPIEngine and tests use the abstracted communicator.
97d0f6555d13
·pastewka on Mar 7 2018, 14:12.
WIP: First implementation of communicator abstraction.
decf9cec7830
·pastewka on Mar 7 2018, 14:12.
WIP: Added MPI communicator as parameter.
d4e48703df52
·pastewka on Mar 7 2018, 13:05.
WIP: fftw_engine_mpi -> fftwmpi_engine
5bef87e106a1
·pastewka on Mar 7 2018, 12:57.
WIP: Added MPIContext singleton that takes care of initializing and tearing…
aa4e5de45421
·pastewka on Mar 7 2018, 12:54.
WIP: Separated MPI tests into their own executable.
3bed7073861b
·pastewka on Mar 7 2018, 12:40.
WIP: Refactoring; FFTWEngineMPI -> FFTWMPIEngine
ee2ccfcd7563
·pastewka on Mar 7 2018, 12:39.
found and fixed mishandled temporary in MaterialHyperElastoPlastic1
9ba60d3594e4
·junge on Mar 7 2018, 02:14.

Mar 6 2018

still writing tests for plastic material
d2cb3c0afe23
·junge on Mar 6 2018, 23:23.
WIP: First version of MPI FFTW test.
ab3be79af63e
·pastewka on Mar 6 2018, 22:31.
DOC: Updated file header.
10f97f358ddc
·pastewka on Mar 6 2018, 21:29.
WIP: Added dummy FFTWEngineMPI. Updated CMakeLists.txt to search for MPI and…
b03a5940750b
·pastewka on Mar 6 2018, 21:24.
WIP: Added and members to FFTEngineBase.
a36d0413024a
·pastewka on Mar 6 2018, 21:23.
writing plastic material tests
0768940e9a0a
·junge on Mar 6 2018, 17:52.
Added StateField convenience functions (concludes T1902)
99f8679e6125
·junge on Mar 6 2018, 13:02.
Added StateField (T1902)
d3affecf925c
·junge on Mar 6 2018, 11:49.

Feb 27 2018

MaterialHyperElastoPlastic1 -> need for History Fields?
8af34878344f
·junge on Feb 27 2018, 18:09.

Feb 26 2018

Documentation cleanup
8dad2be6502e
·junge on Feb 26 2018, 17:38.
Merge branch 'master' into feat/documentation
c18a1858c312
·junge on Feb 26 2018, 17:22.
Merge branch 'feat/documentation' of ssh://c4science.ch/source/muSpectre into…
5b3e095ebb00
·junge on Feb 26 2018, 17:21.
added "Writing a New Constitutive Law" tutorial
57e889b22b09
·junge on Feb 26 2018, 17:20.
- Updated documentation of Field, FieldCollection and FieldMap. - Updated CMake…
4a33d5ec6b0a
·D163
·pastewka on Feb 26 2018, 11:50.

Feb 25 2018

start of MaterialHyperElastoPlastic tests and modulus conversions
4b578078d47c
·junge on Feb 25 2018, 18:07.

Feb 24 2018

Removed the FieldCollection alias
1fe880c12733
·D162
·junge on Feb 24 2018, 15:53.

Feb 23 2018

Small additions
149eca298ec4
·junge on Feb 23 2018, 18:08.
Merge branch 'master' into feat/documentation
7f50f6b3539a
·junge on Feb 23 2018, 09:03.

Feb 22 2018

Efficient logm and const correctness bug in MaterialMuSpectre fixed
2f84baf3e899
·junge on Feb 22 2018, 17:36.
Written elasto-plastic law, no tests yet
1c871f98ffb7
·junge on Feb 22 2018, 17:18.
Compatibility with gcc 5.4
1d0dc43a82d1
·junge on Feb 22 2018, 11:00.

Feb 21 2018

Included a material with distribution of stiffness properties
aeb858290a83
·D161
·RLeute on Feb 21 2018, 16:47.

Feb 20 2018

CMAKE: macOS compatibility
b3f3772f45b1
·D160
·pastewka on Feb 20 2018, 16:41.

Feb 18 2018

Merge branch 'feat/documentation' of ssh://c4science.ch/source/muSpectre into…
619fded5ba20
·junge on Feb 18 2018, 21:52.
documentation
ab2895818a02
·junge on Feb 18 2018, 21:44.

History18_OSX_fixes9137a5a94322394b6eece4e…

Mar 16 2018

Mar 15 2018

Mar 14 2018

Mar 13 2018

Mar 12 2018

Mar 11 2018

Mar 9 2018

Mar 8 2018

Mar 7 2018

Mar 6 2018

Feb 27 2018

Feb 26 2018

Feb 25 2018

Feb 24 2018

Feb 23 2018

Feb 22 2018

Feb 21 2018

Feb 20 2018

Feb 18 2018

History
18_OSX_fixes9137a5a94322394b6eece4e…