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History Graph
History Graph
| Commit | Author | Details | Committed | ||||
|---|---|---|---|---|---|---|---|
| 75e069a6735b | fabien | use temporary variables for the computation | Nov 13 2014 | ||||
| f67b525bf55f | fabien | add support for gmres in sparse_solver module | Nov 13 2014 | ||||
| d9b9320c1f9b | fabien | use new Performance Structure/ PErformance handler and Options handler in… | Nov 13 2014 | ||||
| 736804e88863 | fabien | add options to reset the options in Options handler | Nov 13 2014 | ||||
| 8d8999e139be | fabien | correct boost include dir varaibles in CMakelist.txt | Nov 13 2014 | ||||
| a4f20df9b49f | fabien | Add PerformanceHandler on the model of OptionsHandler | Nov 13 2014 | ||||
| 25b4a7a686ca | fabien | rename file containing the reactive transport solver options | Nov 13 2014 | ||||
| 5246c20b3234 | fabien | update examples for reactmicp | Nov 11 2014 | ||||
| e1f224c238f0 | fabien | improve reactmicp | Nov 11 2014 | ||||
| 86887f7bc2f2 | fabien | improve kinetic system | Nov 11 2014 | ||||
| 05109a387e26 | fabien | add computation of total concentrations in equilibrium data | Nov 11 2014 | ||||
| 89ad784609cf | fabien | correct strang linesearch | Nov 11 2014 | ||||
| d36d2c5a0a89 | fabien | update cemdata database for new version of jsoncpp | Nov 11 2014 | ||||
| 71533d2f738a | fabien | update database reader to use the 3d party jsoncpp lib | Nov 11 2014 | ||||
| 2763d88b9342 | fabien | Update Cmakelist, easier to compile in ohter system (i.e. denali) | Nov 11 2014 | ||||
| bc9b1984b554 | fabien | add kinetic solver - to be improved | Nov 7 2014 | ||||
| 76335401d226 | fabien | update/improve Runge-Kutta solver | Nov 7 2014 | ||||
| f6de050d917e | fabien | options to enable/disable nonmonotone linesearch | Nov 7 2014 | ||||
| d6ddcf0a9bd2 | fabien | add base class to handle options | Nov 7 2014 | ||||
| 2f65d5a63c08 | fabien | start implementing kinetics solver | Oct 28 2014 | ||||
| 250e37bca411 | fabien | clean ode integrator | Oct 28 2014 | ||||
| 0b9e18fb7d56 | fabien | update cython interface to use the licit charge conservation equation | Oct 26 2014 | ||||
| bbb049d91863 | fabien | add explicit charge conservation in ReducedSystem | Oct 26 2014 | ||||
| 29fe36a29e5a | fabien | undef INFO macro, specmicp logger's INFO is the correct one, not the one by… | Oct 26 2014 | ||||
| b86528d727b5 | fabien | move and try improving sparse solver tools | Oct 26 2014 | ||||
| 6d08d8744732 | fabien | add reactive transport neutrality solver, and update transport program and the… | Oct 25 2014 | ||||
| 745d2292fc54 | fabien | add transport_parameters_base, to share porosity and have only one variables | Oct 25 2014 | ||||
| 8ce74ad5e3d5 | fabien | set update check to be at machine epsilon in secondary variables computation | Oct 25 2014 | ||||
| 849e20a62100 | fabien | improve drivers | Oct 25 2014 | ||||
| 7135b65ac516 | fabien | correct equilibrium_date (int -> index_t) | Oct 22 2014 | ||||
| 6c35d421db39 | fabien | update program, coupler tests and examples to use new features of dfpm solver | Oct 22 2014 | ||||
| a2c41c6968cc | fabien | better scaling and velocity handling | Oct 22 2014 | ||||
| 7009d71a1296 | fabien | lots of small corrections | Oct 21 2014 | ||||
| 0e24a03b71fa | fabien | modify jacobian computation in electroneutrality program | Oct 21 2014 | ||||
| 6bc8e317a3ae | fabien | add scaling to dfpmsolver | Oct 21 2014 | ||||
| ab2944bc8002 | fabien | add electroneutrality transport program | Oct 20 2014 | ||||
| dd35febf8e48 | fabien | add minimal support for quasi Newton iterations in parabolic solver | Oct 20 2014 | ||||
| e64992a2bc6c | fabien | add strang linesearch into parabolic driver | Oct 20 2014 | ||||
| e882181496b7 | fabien | start work on a the transport oslver with neutrality | Oct 15 2014 | ||||
| f42f76860daf | fabien | adapt reduce_system_Solver to allow minerals that can't dissolve | Oct 10 2014 | ||||
| 4607780abc35 | fabien | add support for not dissolving/not precipitating minerals in database | Oct 10 2014 | ||||
| 9ac10ec69a99 | fabien | reduce header dependancy | Oct 9 2014 | ||||
| e72e464ed90b | fabien | add again the contribution of the descent step direction, change dection of… | Oct 9 2014 | ||||
| 69f1f340a8f5 | fabien | use typedef | Oct 9 2014 | ||||
| da3d68efcce0 | fabien | add example directory | Oct 8 2014 | ||||
| afebadac83de | fabien | correct name of reactmicp test folder to tests/reactmicp | Oct 8 2014 | ||||
| a3fe40ba7210 | fabien | add axissymmetric mesh 1d, one file per mesh, add reactmicp/mesh.hpp | Oct 8 2014 | ||||
| d7e3744afdfe | fabien | correct type in safeguard | Oct 8 2014 | ||||
| a82ae4d34189 | fabien | Prepare mesh module for asymmetric mesh | Oct 8 2014 | ||||
| dbcf1c3de1b8 | fabien | add transport options into reactive transport options | Oct 8 2014 | ||||
| e5216c0292f7 | fabien | detect linesearch failure in MiCPSolver, which allow restart in… | Oct 8 2014 | ||||
| a70d03795fe6 | fabien | delete previous files added by mistake | Oct 6 2014 | ||||
| 48eb4f5d4263 | fabien | Merge branch 'reactivetransport' of bitbucket.org:fabieng/specmicp into… | Oct 6 2014 | ||||
| c7ac0a493911 | fabien | update database, micpsolver and specmicp to use common.hpp | Oct 6 2014 | ||||
| 032d87790f74 | fabien | update database, micpsolver and specmicp to use common.hpp | Oct 6 2014 | ||||
| c46a22fd727b | fabien | modify reactmicp and dfpmsolver to use common.hpp | Oct 6 2014 | ||||
| a04acf96600a | fabien | modify equilibrium data so it uses the new common.hpp | Oct 6 2014 | ||||
| eb7779e20fdf | fabien | add common.hpp, modify database module to use it | Oct 6 2014 | ||||
| 191d56f41074 | fabien | add cmakefile in directory test | Oct 3 2014 | ||||
| e5484eae1665 | fabien | remove unecessary files | Oct 3 2014 | ||||
| 1461da1319e9 | fabien | improve fixed-point iteration solver | Oct 3 2014 | ||||
| 83e1af765087 | fabien | SIA reactive transport start to work | Oct 1 2014 | ||||
| f0bae6f199e0 | fabien | add scaling method in EquilibriumState | Oct 1 2014 | ||||
| 48743d675901 | fabien | add method to compute residuals from outside, and adjust logging message | Oct 1 2014 | ||||
| 49aeec52193c | fabien | start working on BCs and ther applications | Sep 28 2014 | ||||
| a68894083238 | fabien | update and coupling utils in SIASaturatedVariables | Sep 28 2014 | ||||
| eebb86eba7d7 | fabien | add residuals and update norms in performance for parabolic solver | Sep 26 2014 | ||||
| 35e7d8aacfae | fabien | add residual and update norm in performance for micpsolver | Sep 26 2014 | ||||
| 6110aa030886 | fabien | allow the non-conservation of water in reaction_path/reduce_system | Sep 26 2014 | ||||
| 8342bd67907c | fabien | dfpmsolver, and saturated_diffusion program can be solved | Sep 26 2014 | ||||
| b5fde6377526 | fabien | start working on SIA solver | Sep 25 2014 | ||||
| f1c39bf54729 | fabien | reactive transport - fully implicit ... does not work | Sep 25 2014 | ||||
| 90597818e3ba | fabien | towards a correct code ? | Sep 24 2014 | ||||
| 68b7dab0dd3d | fabien | it works \o/ | Sep 21 2014 | ||||
| 26456e9e2cd2 | fabien | add a few methods to EquilibriumState | Sep 21 2014 | ||||
| 8a4ab92c89b3 | fabien | Correct bug in ionic strength computation in Reducedsystem | Sep 21 2014 | ||||
| 8659642b7a98 | fabien | MiCPParabolicSolver runs, does not solve anything | Sep 11 2014 | ||||
| 141e6db490b4 | fabien | correction of bugs due to merging, also use new database range_* function in… | Sep 10 2014 | ||||
| fe4a3c6ffe37 | fabien | Merge branch 'reactivetransport' | Sep 10 2014 | ||||
| 8d16e3a0c811 | fabien | remove thermodata.hpp, use DataContainer in reduced solver | Sep 10 2014 | ||||
| d01a0c53637d | fabien | add the main diffusion system | Sep 10 2014 | ||||
| f1b23f04d9ad | fabien | introducing DiffusionSecondary for activity coefficient and concentration of… | Sep 10 2014 | ||||
| e0f20360e06e | fabien | move and improve equation numbering for diffusion reactive transport system | Sep 10 2014 | ||||
| 43a8958938af | fabien | jacobian and residuals computation - not tested | Sep 10 2014 | ||||
| 4873112352b5 | fabien | add range support in database::DataContainer | Sep 10 2014 | ||||
| 54f4e1c465c9 | fabien | bug correction for diffusion system | Sep 10 2014 | ||||
| b1dec92efd3e | fabien | first commit on branch reactivetransport | Sep 10 2014 | ||||
| f19180e3b265 | fabien | improving the CMake file to compile the python interface | Sep 9 2014 | ||||
| f401e32a96d2 | fabien | thermocarbo.py is running ok | Sep 9 2014 | ||||
| f89b95873e65 | fabien | The python interface is able to solve the first step of thermocarbo | Sep 9 2014 | ||||
| 5ece8356c796 | fabien | use shared_ptr instead of raw ptr in database module | Sep 9 2014 | ||||
| ba25334b0c65 | fabien | Wrapper for ReducedSystemSolverOptions | Sep 9 2014 | ||||
| 5d8bdeedf9e7 | fabien | complete ReactionPathSimulation | Sep 9 2014 | ||||
| 5d71ccc1da23 | fabien | Starting the work on the reaction path solver | Sep 8 2014 | ||||
| 3dbb26cb459b | fabien | comments and documentation | Sep 8 2014 | ||||
| 41ba8a2a83cb | fabien | create module specmicp and add unit tests | Sep 8 2014 | ||||
| 84dc444f1a49 | fabien | swapping components and removing minerals is now possible in python | Sep 8 2014 | ||||
| cc762abbb0d9 | fabien | first commit to cython branch, start interface for database | Sep 7 2014 | ||||
| 02c100013be0 | fabien | improve thermocarbo and carboalu test | Sep 5 2014 | ||||
| 54f50e62ff4b | fabien | reintroduce the old solver, for a ~working min solver | Sep 5 2014 |
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