Diffusion SpecMiCP / ReactMiCP (dev) History

reactmicp
dev03817253affde07d40bce35…

Feb 13 2018

chloride: good equilibrium obtained for Na/Cl system
03817253affd
·georget on Feb 13 2018, 13:15.

Jan 29 2018

tmp: lot small changes for system transfer
35557e3cfb69
·georget on Jan 29 2018, 20:36.

Dec 22 2017

chloride: more work on the chloride system
848705901e68
·georget on Dec 22 2017, 16:56.

Dec 11 2017

chloride:fix with tests
c900f5ba2d13
·georget on Dec 11 2017, 11:54.
reactmicp:add helper function to transform dfpm return code
8a7c3529bcc0
·georget on Dec 11 2017, 11:52.

Dec 8 2017

continuing chloride system implementation
00f02a85ce08
·georget on Dec 8 2017, 17:24.

Nov 27 2017

reactmicp: add member to ChemistryStaggerBase
5d637ad6be6d
·georget on Nov 27 2017, 11:47.

Nov 20 2017

chloride: first commit for new chloride system
3a45c7fe073a
·georget on Nov 20 2017, 13:14.

Oct 31 2017

build:fix PGO optimization
50d9a67908d3
·georget on Oct 31 2017, 13:18.

Oct 27 2017

Some more comments
921a58bdaf61
·georget on Oct 27 2017, 18:06.

Sep 13 2017

build:fix one more for the road baby
9e31d0b9115e
·georget on Sep 13 2017, 11:40.

Sep 12 2017

build:fix fix hdf5 include dirs
fd1f6982eaf8
·georget on Sep 12 2017, 16:34.
build: fix the fix, std(11)(14) compilation
569af6df0266
·georget on Sep 12 2017, 15:58.
build: Add SpecMiCPConfig.cmake : package file
990fa8a6d5ec
·georget on Sep 12 2017, 13:20.

Sep 11 2017

build: refactor cmake file for cmake config file
9f0bfa6957ca
·georget on Sep 11 2017, 15:59.

Aug 22 2017

doc: More documentation !
4728ae8e7325
·georget on Aug 22 2017, 22:03.

Aug 4 2017

Documentation run
f7c95635bdac
·georget on Aug 4 2017, 18:52.

Apr 18 2017

reactmicp:runner return _iter filepath
7689995362b8
·georget on Apr 18 2017, 22:49.
minor:reactmicp:unsaturated add useful comment on variables creation
370081051f4e
·georget on Apr 18 2017, 22:44.

Mar 13 2017

fix:unsaturated read inert_volume_fractio from hdf5 file
8044abc08d5b
·georget on Mar 13 2017, 18:40.

Oct 4 2016

minor: add configuration log for no_precipitation
06af08aa99ce
·georget on Oct 4 2016, 19:22.

Sep 21 2016

reactmicp: Add constraint to remove the precipitation of a mineral
37c71514d885
·georget on Sep 21 2016, 19:16.
debug: print the current residuals
05066e4d960f
·georget on Sep 21 2016, 19:12.
unsaturated: add residuals in post_residuals_impl
30a1dd687101
·georget on Sep 21 2016, 19:09.

Aug 3 2016

minor:fix:reactmicp clean whitespaces is iter output
357c78b974d0
·georget on Aug 3 2016, 17:18.

Jul 22 2016

fix: add missing compilation headers
e9389b3fb332
·georget on Jul 22 2016, 16:05.

Jun 24 2016

impr:reactmicp:unsaturated Transport stagger conf
c6cff64fe196
·georget on Jun 24 2016, 16:47.

Jun 21 2016

fix:reactmicp:unsaturated check residuals_0
af90341cb097
·georget on Jun 21 2016, 17:21.
fix:reactmicp:unsaturated computation of aqueous transport residuals
2de6635023a7
·georget on Jun 21 2016, 17:19.
reactmicp:unsaturated fix firsts residual in transport
a827fdd5b2b3
·georget on Jun 21 2016, 17:11.
add:reactmicp:hdf5: the unsaturated reader can return the mesh
ac46e0a5bfda
·georget on Jun 21 2016, 17:07.

Jun 3 2016

add:reactmicp:unsaturated Inert volume fraction
a1d31955868e
·georget on Jun 3 2016, 21:13.
add:reactmicp Transfer clock time
926e75cd0a71
·georget on Jun 3 2016, 20:07.
Add:rectmicp:unsaturated Implicit gas flux
1ba90898b04a
·georget on Jun 3 2016, 19:24.

May 27 2016

fix:out more descriptive log messages
821379fc98d7
·georget on May 27 2016, 15:11.
fix:unsaturated modify precision of jacobian
28297954ab81
·georget on May 27 2016, 15:05.

May 25 2016

fix:reactmicp:unsaturated check before set
4d7034361c24
·georget on May 25 2016, 03:34.
fix: towards 0 warning with Clang
8e2ae07751c4
·georget on May 25 2016, 03:21.

May 22 2016

fix: compilation free warning !
c1ba3920479b
·georget on May 22 2016, 22:51.

May 15 2016

fix:reactmicp Remove unnecessary visibility directives
95882d9768cd
·georget on May 15 2016, 17:42.

May 14 2016

add:mesh read/save mesh in hdf5 file
024def84ee79
·georget on May 14 2016, 21:01.

Apr 19 2016

minor:reactmicp:unsaturated cleanup transport stagger
0e6eede28aa4
·georget on Apr 19 2016, 22:31.
impr:dfpm:io print functions are in their own module
213a1c2ddeb9
·georget on Apr 19 2016, 21:18.
fix:reactmicp:unsaturated fix options getters in transport staggers
acc7f102c526
·georget on Apr 19 2016, 18:07.
fix various bugs found with asan/ubsan
d5e810125277
·georget on Apr 19 2016, 03:15.

Apr 9 2016

fix:build fix hdf5 include directories
97dcff9fa40d
·georget on Apr 9 2016, 20:27.

Apr 7 2016

fix:reactmicp:unsaturated:transport_stagger move dfpm solver initialization
8d7445331c34
·georget on Apr 7 2016, 17:56.
impr:reactmicp:solver print debug information if return code is good enough
6e88c9b19244
·georget on Apr 7 2016, 17:49.

Apr 6 2016

impr:reactmicp:unsaturated only compute residual 0 when initialisation is done
080906e9f926
·georget on Apr 6 2016, 22:45.
impr:reactmicp:unsaturated compute equilibrium for each node at the beginning…
5f8a1f17204f
·georget on Apr 6 2016, 19:20.

Apr 1 2016

fix:build install specmicp/reactmicp main headers
d72d8bcb98a4
·georget on Apr 1 2016, 19:00.

Mar 31 2016

impr:reactmicp:unsaturated openmp directives -> change scheduling for solving…
abfc691f2c1d
·georget on Mar 31 2016, 02:35.
impr:reactmicp:unsaturated:io rewrited hdf5 saver/reader using new wrapper
3e0ab284bd47
·georget on Mar 31 2016, 02:35.

Mar 21 2016

upd:reactmicp runner also output the resource usage information
1e56d0882286
·georget on Mar 21 2016, 20:30.

Mar 20 2016

doc:reactmicp:solver
18753ecb08de
·georget on Mar 20 2016, 16:36.

Mar 18 2016

upd:reactmicp:solver hide implementation details of runner
e21028dfd1f9
·georget on Mar 18 2016, 14:44.

Mar 17 2016

fix:reactmicp:solver timer, and timer output
8b85285ada0c
·georget on Mar 17 2016, 15:39.

Mar 16 2016

impr:reactmicp:unsaturated can now use millimoles unit
41fa07d8cfab
·georget on Mar 16 2016, 15:44.

Mar 7 2016

cosmetic:unsaturated
712a7e059d81
·georget on Mar 7 2016, 21:46.
impr:reactmicp move all timestep initialization to transport stagger
81ec8df88413
·georget on Mar 7 2016, 21:43.
impr:unsaturated:chemistry return option vector
06a7c676281b
·georget on Mar 7 2016, 21:38.
impr:reactmicp share chemistry and transport stagger with upscaling stagger
3d97f5b10cac
·georget on Mar 7 2016, 21:32.

Mar 2 2016

impr:reactmicp:solver allow passing the working directory
c5400cbd468d
·georget on Mar 2 2016, 17:07.
fix:unsaturated many small corrections
72260a03c6cc
·georget on Mar 2 2016, 16:01.

Feb 29 2016

fix:reactmicp:unsaturated fix ? some work still needed on merged equations
f7dff2d80197
·georget on Feb 29 2016, 18:44.
impr:reactmicp:unsaturated use smart solver if needed in equilibrium stagger
d4df81a69eac
·georget on Feb 29 2016, 15:32.
impr:reactmicp call to transport stagger to print information
4eccfa347703
·georget on Feb 29 2016, 15:28.

Feb 26 2016

impr:unsaturated add debug information in equilibrium_stagger
c54dc4629ec7
·georget on Feb 26 2016, 17:33.
fix:systems:unsaturated:variables also reset secondary variables
c47f2ae4e1c8
·georget on Feb 26 2016, 16:16.
fix:unsaturated:transport_stagger multiple fixes
c009ebffe161
·georget on Feb 26 2016, 16:06.
fix:reactmicp:runner fix output when error happen
41638955a9ab
·georget on Feb 26 2016, 15:54.

Feb 24 2016

impr:reactmicp solve last timestep
a343a6e56309
·georget on Feb 24 2016, 17:01.
impr:reactmicp print updtate in iter.dat file
b7feed8c4364
·georget on Feb 24 2016, 15:26.

Feb 23 2016

upd:reactmicp configuration logs
c5960bb39088
·georget on Feb 23 2016, 19:21.
impr:unsaturated scaling of equations
0c267aad86d8
·georget on Feb 23 2016, 05:01.

Feb 22 2016

fix:unsaturated improve unsaturated system
54b4cd1847e6
·georget on Feb 22 2016, 18:46.

Feb 20 2016

feat:unsaturated Add better bcs management
f8005ed71a51
·georget on Feb 20 2016, 16:42.

Feb 12 2016

feat:build add config.h for compilation configuration
c9be56a25d1b
·georget on Feb 12 2016, 19:59.

Feb 11 2016

upd:examples saturated carbonation comples with new safe config
3a8d0ac4dcdd
·georget on Feb 11 2016, 23:18.
impr:config put all yaml sections/attributes definitions in one file
164da40b7b8e
·georget on Feb 11 2016, 21:52.

Feb 9 2016

fix:unsaturated Add virtual destructor in TaskBase of the Transport stagger
5cd777d340f0
·georget on Feb 9 2016, 22:46.
impr:unsaturated check variables after stagger initialization
aaba6845120f
·georget on Feb 9 2016, 15:36.

Feb 7 2016

fix:dfpm move parabolic solver configuration to dfpm module
ad9485debbde
·georget on Feb 7 2016, 20:28.
impr:organization update reactmicp lib like the others
febe8f3e40e1
·georget on Feb 7 2016, 17:08.

Feb 5 2016

impr:reacmicp move configuration to the nuw safe_config module
02297163a9df
·georget on Feb 5 2016, 19:45.
impr:unsaturated new safe yaml config for upscaling interface
f4a0766ab4b2
·georget on Feb 5 2016, 19:37.

Feb 4 2016

impr:unsaturated use new safe YAML config to configure the boundary conditions
c0b0df5b49df
·georget on Feb 4 2016, 15:30.
impr:unsaturated use new safe yaml config to initialize variables
b98b799c5302
·georget on Feb 4 2016, 15:29.
impr:unsaturated add nodes in bcs using vector
18aa613d0ff2
·georget on Feb 4 2016, 15:23.

Jan 29 2016

feat:unsaturated add plugin base class for UpscalingStagger
07cf02484278
·fabien on Jan 29 2016, 16:51.
fix:unsaturated Const-correctness for a few members of UnsaturatedVariables
c906d2dfe281
·fabien on Jan 29 2016, 16:44.
fix:unsaturated API of ItizializeVariables plugin
38fcc4f2a0c0
·fabien on Jan 29 2016, 16:39.
fix:io:unsaturated Export configuration symbols
10d3d5f12060
·fabien on Jan 29 2016, 16:32.
feat:unsaturated share simulation data through a unified struct
5a0ff54ef63c
·fabien on Jan 29 2016, 16:30.
impr:io:reactmicp add conservative DFPMoptions conf parser
3e29b51167ae
·fabien on Jan 29 2016, 16:27.

Jan 28 2016

feat:io unsaturated configuration of EquilibriumOptions
ac55e834f6f0
·fabien on Jan 28 2016, 03:51.
fix:unsaturated add OptionsVector as its own class
5a5b0d18024f
·fabien on Jan 28 2016, 01:16.

Jan 27 2016

feat:unsaturated add configuration of boundary conditions
945b7db8f333
·fabien on Jan 27 2016, 22:43.
impr:unsaturated add a few members to BoundaryConditions
31924008cc60
·fabien on Jan 27 2016, 22:37.
fix:unsaturated API consistency for Transport stagger
48c2baac78e2
·fabien on Jan 27 2016, 15:29.

specmicp/src/reactmicpdev03817253affde07d40bce35…

Feb 13 2018

Jan 29 2018

Dec 22 2017

Dec 11 2017

Dec 8 2017

Nov 27 2017

Nov 20 2017

Oct 31 2017

Oct 27 2017

Sep 13 2017

Sep 12 2017

Sep 11 2017

Aug 22 2017

Aug 4 2017

Apr 18 2017

Mar 13 2017

Oct 4 2016

Sep 21 2016

Aug 3 2016

Jul 22 2016

Jun 24 2016

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Jun 3 2016

May 27 2016

May 25 2016

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Apr 19 2016

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Apr 1 2016

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Mar 2 2016

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Feb 23 2016

Feb 22 2016

Feb 20 2016

Feb 12 2016

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Feb 9 2016

Feb 7 2016

Feb 5 2016

Feb 4 2016

Jan 29 2016

Jan 28 2016

Jan 27 2016

specmicp/src/reactmicp
dev03817253affde07d40bce35…