Diffusion SpecMiCP / ReactMiCP (master) History

specmicp/src
master55b54e9c16de0f93c226ced…

Mar 31 2016

upd:database:io:hdf5 update hdf5 output to new wrapper
55b54e9c16de
·georget on Mar 31 2016, 02:35.
upd:dfpm:io:hdf5 move hdf5 output to new wrapper
8618dbed70e1
·georget on Mar 31 2016, 02:35.
impr:io:hdf5 more wrapping around hdf5
4bb0e2c6c160
·georget on Mar 31 2016, 02:35.
fix:common:yaml_format higher precision for database output
ca73ab03cfed
·georget on Mar 31 2016, 01:59.

Mar 28 2016

upd:hdf5 Use the new hdf5 wrapper API in HDF5timesteps
7436518aa391
·georget on Mar 28 2016, 15:41.

Mar 25 2016

upd:specmicp:hdf5 save adim solution using new hdf5 wrapper
37417552df4c
·georget on Mar 25 2016, 18:59.
feat:io:hdf5 more wrapper
0bf1cbc67cee
·georget on Mar 25 2016, 18:58.

Mar 24 2016

feat:io:hdf5 add new HDF5 C API wrapper
b228fbc4dd5c
·georget on Mar 24 2016, 14:48.

Mar 21 2016

fix:build install main specmicp_common headers
681cd24cdd7c
·georget on Mar 21 2016, 20:34.
upd:reactmicp runner also output the resource usage information
1e56d0882286
·georget on Mar 21 2016, 20:30.
feat:specmicp_common basic resource usage information
5ad2f9b7bdde
·georget on Mar 21 2016, 20:29.

Mar 20 2016

doc:reactmicp:solver
18753ecb08de
·georget on Mar 20 2016, 16:36.
doc:specmicp_common
9c102ac65486
·georget on Mar 20 2016, 16:34.

Mar 19 2016

cosmetic:common:vector_checker put details in sub namespace and docs
c8a930e056dd
·georget on Mar 19 2016, 21:14.

Mar 18 2016

feat:specmicp Reactant box can now return a set of constraints
d94792a4f65f
·georget on Mar 18 2016, 22:42.
impr:specmicp:extractor add cache for unit conversions
20f010b038f7
·georget on Mar 18 2016, 19:30.
upd:reactmicp:solver hide implementation details of runner
e21028dfd1f9
·georget on Mar 18 2016, 14:44.

Mar 17 2016

fix:reactmicp:solver timer, and timer output
8b85285ada0c
·georget on Mar 17 2016, 15:39.
fix:binary:unsaturated plugins name
1f3cc82ccbe0
·georget on Mar 17 2016, 14:02.
doc:specmicp_common
3f7631e04176
·georget on Mar 17 2016, 02:43.
impr:plugins clear plugins naming scheme
8c6f18b219e5
·georget on Mar 17 2016, 01:54.

Mar 16 2016

impr:reactmicp:unsaturated can now use millimoles unit
41fa07d8cfab
·georget on Mar 16 2016, 15:44.
fix:micpsolver fix perf struct addition, return the last residual
1f66c20f5a45
·georget on Mar 16 2016, 15:27.
fix:specmicp millimoles unit now works !
4412fddf1e1c
·georget on Mar 16 2016, 15:26.
impr:units add liter in volume unit
c971cf4615b6
·georget on Mar 16 2016, 15:21.
fix:build same options to build reactimcp_unsaturated with static libs`
52a48c08d9b4
·georget on Mar 16 2016, 15:13.

Mar 14 2016

fix:specmicp:probelm_solver units, units, units
8097bf3fab7d
·georget on Mar 14 2016, 15:17.

Mar 13 2016

feat:specmicp ReactantBox : initial formulation with units
9149aa40938d
·georget on Mar 13 2016, 21:44.
impr:specmicp_common:laws add function to obtain density of water with correct…
ab4484108d65
·georget on Mar 13 2016, 21:43.

Mar 11 2016

upd:units use new units system
446e84e51406
·georget on Mar 11 2016, 04:51.
upd:database add a global variable giving the units used internally
470a55f4feaf
·georget on Mar 11 2016, 04:51.
impr:units add SI and CMG units as global variables
4b53dfe6a743
·georget on Mar 11 2016, 04:51.
upd:specmicp adim system used new moles unit
1ecc67c5bb68
·georget on Mar 11 2016, 00:50.
upd:database use new mol unit, deprecate old unit conversion functions
d8b704dea3af
·georget on Mar 11 2016, 00:48.

Mar 10 2016

feat:units add quantity of matters unit in specmicp_common
d4e389fc2ce0
·georget on Mar 10 2016, 20:12.

Mar 7 2016

cosmetic:unsaturated
712a7e059d81
·georget on Mar 7 2016, 21:46.
impr:reactmicp move all timestep initialization to transport stagger
81ec8df88413
·georget on Mar 7 2016, 21:43.
impr:unsaturated:chemistry return option vector
06a7c676281b
·georget on Mar 7 2016, 21:38.
impr:reactmicp share chemistry and transport stagger with upscaling stagger
3d97f5b10cac
·georget on Mar 7 2016, 21:32.

Mar 2 2016

cosmetic:micpsolver debug messages
a87642f4f330
·georget on Mar 2 2016, 17:43.
impr:bin:unsaturated User can give working directory as CLI argument
46a8244a02b1
·georget on Mar 2 2016, 17:08.
impr:reactmicp:solver allow passing the working directory
c5400cbd468d
·georget on Mar 2 2016, 17:07.
impr:logs allow passing the working directory
43833ec52c24
·georget on Mar 2 2016, 17:05.
fix:unsaturated many small corrections
72260a03c6cc
·georget on Mar 2 2016, 16:01.
impr:filesystem add function to check if path is absolute
6443f8a7a8ec
·georget on Mar 2 2016, 15:55.

Feb 29 2016

fix:reactmicp:unsaturated fix ? some work still needed on merged equations
f7dff2d80197
·georget on Feb 29 2016, 18:44.
impr:reactmicp:unsaturated use smart solver if needed in equilibrium stagger
d4df81a69eac
·georget on Feb 29 2016, 15:32.
impr:reactmicp call to transport stagger to print information
4eccfa347703
·georget on Feb 29 2016, 15:28.
binary:unsaturated add options to save database before computation
ad0acbd54cc9
·georget on Feb 29 2016, 15:26.
feat:specmicp:workinprogress add a "smart solver" for specmicp
535d95297fcc
·georget on Feb 29 2016, 15:22.

Feb 26 2016

impr:unsaturated add debug information in equilibrium_stagger
c54dc4629ec7
·georget on Feb 26 2016, 17:33.
impr:micpsolver print residuals in error output
4849fec17c96
·georget on Feb 26 2016, 17:30.
impr:specmicp:config add 'inert_volume_fraction' option in configuration
bf4a7246412a
·georget on Feb 26 2016, 17:17.
impr:specmicp only solve pressure model if we solve non ideality model
2c3c47ab3079
·georget on Feb 26 2016, 17:16.
impr:specmicp add options to specify restart water volume fraction
70236c20c4d2
·georget on Feb 26 2016, 16:43.
fix:systems:unsaturated:variables also reset secondary variables
c47f2ae4e1c8
·georget on Feb 26 2016, 16:16.
fix:unsaturated:transport_stagger multiple fixes
c009ebffe161
·georget on Feb 26 2016, 16:06.
fix:reactmicp:runner fix output when error happen
41638955a9ab
·georget on Feb 26 2016, 15:54.
impr:dfpm:solver set constant scaling factor
27eaf6dfda72
·georget on Feb 26 2016, 15:49.

Feb 24 2016

impr:reactmicp solve last timestep
a343a6e56309
·georget on Feb 24 2016, 17:01.
impr:reactmicp print updtate in iter.dat file
b7feed8c4364
·georget on Feb 24 2016, 15:26.
impr:specmicp add configuration options for AdimSystem
79cec8e3b78b
·georget on Feb 24 2016, 15:19.
impr:micpsolver add more debugging information in case of failure
35fd3ccb1bcd
·georget on Feb 24 2016, 15:18.
impr:dfpm add more debugging info in parabolic solver
4f8de494c1f9
·georget on Feb 24 2016, 15:13.

Feb 23 2016

upd:reactmicp configuration logs
c5960bb39088
·georget on Feb 23 2016, 19:21.
upd:database configuration logs
772407eb0b8a
·georget on Feb 23 2016, 19:18.
upd:specmicp_common configuration logs
1bc1272955cd
·georget on Feb 23 2016, 19:17.
impr:specmicp print configuration informations
f57080d65807
·georget on Feb 23 2016, 19:12.
impr:dfpm print configuration
3011ec96697d
·georget on Feb 23 2016, 19:10.
impr:unsaturated scaling of equations
0c267aad86d8
·georget on Feb 23 2016, 05:01.
upd:unsaturated use configuration log in unsaturated binary
ed3d71a1c713
·georget on Feb 23 2016, 05:01.
upd:utils openmp support now use configuration log to output information
cb7917e2132b
·georget on Feb 23 2016, 05:01.
upd:logs configuration of configuration logs
da18e8f660a6
·georget on Feb 23 2016, 05:01.
feat:log add logger for configurations
ed6c1b38001d
·georget on Feb 23 2016, 05:01.
feat:openmp Initialization/runtime functions for OpenMP support
3907f96d9994
·georget on Feb 23 2016, 04:56.

Feb 22 2016

upd:binary:unsaturated use logger oconfiguration
18aa5723fd51
·georget on Feb 22 2016, 21:20.
feat:logger configure the logger from yaml config
d28419f2ad44
·georget on Feb 22 2016, 21:19.
fix:string_algo parse algebraic expressions from right to left
a12cebca0184
·georget on Feb 22 2016, 19:07.
fix:unsaturated improve unsaturated system
54b4cd1847e6
·georget on Feb 22 2016, 18:46.
fix:mesh resize unused storage in generic mesh
dc538b38aa10
·georget on Feb 22 2016, 18:39.

Feb 20 2016

feat:unsaturated Add better bcs management
f8005ed71a51
·georget on Feb 20 2016, 16:42.
impr:utils add functions to create range iterators
945a7c6ae8c0
·georget on Feb 20 2016, 16:37.

Feb 13 2016

feat:filesytem check if an environment variable exist
4ad745da2326
·georget on Feb 13 2016, 03:56.

Feb 12 2016

feat:build add config.h for compilation configuration
c9be56a25d1b
·georget on Feb 12 2016, 19:59.

Feb 11 2016

upd:examples saturated carbonation comples with new safe config
3a8d0ac4dcdd
·georget on Feb 11 2016, 23:18.
impr:config put all yaml sections/attributes definitions in one file
164da40b7b8e
·georget on Feb 11 2016, 21:52.

Feb 9 2016

fix:build compilation with clang
4f3937b40c85
·georget on Feb 9 2016, 22:47.
fix:unsaturated Add virtual destructor in TaskBase of the Transport stagger
5cd777d340f0
·georget on Feb 9 2016, 22:46.
bin:unsaturated database directories
4733aa6aab87
·georget on Feb 9 2016, 20:19.
feat:specmicp_common read environment variables
1951b8f4aa11
·georget on Feb 9 2016, 20:16.
feat:database search database in given directories
a85867b167f6
·georget on Feb 9 2016, 18:03.
tmp:fix:cli undefined pointers when vector gets reallocated
d15b6ebe379f
·georget on Feb 9 2016, 18:01.
fix:filesystem if a file is already a path it is used in find_path
9959ceaa0785
·georget on Feb 9 2016, 16:38.
feat:filesystem transform relative to absolute path
c2cee8e91f74
·georget on Feb 9 2016, 16:34.
impr:unsaturated check variables after stagger initialization
aaba6845120f
·georget on Feb 9 2016, 15:36.

Feb 7 2016

impr:dfpm move yaml keys definitions to its own include
6197f0853f61
·georget on Feb 7 2016, 21:16.
fix:dfpm move parabolic solver configuration to dfpm module
ad9485debbde
·georget on Feb 7 2016, 20:28.
impr:organization fix main headers
fd07764ad76b
·georget on Feb 7 2016, 17:08.
fix:organization update binaries
5370f3c30e60
·georget on Feb 7 2016, 17:08.
impr:organization update reactmicp lib like the others
febe8f3e40e1
·georget on Feb 7 2016, 17:08.

specmicp/srcmaster55b54e9c16de0f93c226ced…

Mar 31 2016

Mar 28 2016

Mar 25 2016

Mar 24 2016

Mar 21 2016

Mar 20 2016

Mar 19 2016

Mar 18 2016

Mar 17 2016

Mar 16 2016

Mar 14 2016

Mar 13 2016

Mar 11 2016

Mar 10 2016

Mar 7 2016

Mar 2 2016

Feb 29 2016

Feb 26 2016

Feb 24 2016

Feb 23 2016

Feb 22 2016

Feb 20 2016

Feb 13 2016

Feb 12 2016

Feb 11 2016

Feb 9 2016

Feb 7 2016

specmicp/src
master55b54e9c16de0f93c226ced…