Diffusion tamaas (petsc) History

History
petsc24c86549be3ebfc81a3f960…

Mar 8 2018

wrapping adhesion functionals
24c86549be3e
·frerot on Mar 8 2018, 16:00.

Mar 7 2018

removed swig (swig is DEAD! let us sing on its corpse!)
9653f874d0f6
·frerot on Mar 7 2018, 17:48.
wrapping old BEM and added some comments
511f8f3f957d
·frerot on Mar 7 2018, 17:44.
potential fix to a conversion problem with GridHermitian
af94be1267cc
·frerot on Mar 7 2018, 16:53.
wrapped most of modern Tamaas
5ad7e31c1c5e
·frerot on Mar 7 2018, 16:22.
added type casters for pybind11
4ef018c79b67
·frerot on Mar 7 2018, 14:09.

Mar 6 2018

passing the flood fill test
b7c8f6979d6b
·frerot on Mar 6 2018, 16:28.
wrapping percolation module
c46ef4573c24
·frerot on Mar 6 2018, 16:24.

Mar 5 2018

modified tests for possible use with pytest
0ec7072aaca3
·frerot on Mar 5 2018, 15:58.
added pybind11 as submodule
ff8558d8ee66
·frerot on Mar 5 2018, 13:28.
moved to shared_ptr for meta functional list elements
f394931cca31
·frerot on Mar 5 2018, 13:06.
fixed PKR algo for adhesion
0733646b1821
·frerot on Mar 5 2018, 11:22.

Mar 2 2018

running adhesion example, but problem with final state of solution
99e8b8cff2f4
·frerot on Mar 2 2018, 18:10.

Mar 1 2018

porting adhesion functionals to new code
3b4e6d404c40
·frerot on Mar 1 2018, 18:39.
uniform compilation strings
1689544e691c
·frerot on Mar 1 2018, 16:26.

Feb 27 2018

fix to swig scons tool for docker image
cbc6fc6b1827
·frerot on Feb 27 2018, 17:41.
added option to not use criterion
35111e94f46c
·frerot on Feb 27 2018, 14:54.

Dec 13 2017

fixing tests not passing with python 3.6
33f3286cfb96
·frerot on Dec 13 2017, 14:54.
making everything work on my new system
965538b78f0d
·frerot on Dec 13 2017, 14:49.
fixed leak on model in test_rough_surface
b5577c4d3177
·frerot on Dec 13 2017, 14:47.

Nov 29 2017

suppressed some compile errors with nvcc
05cb094fac6a
·frerot on Nov 29 2017, 10:59.

Nov 23 2017

simplification of influence functions code
73dd359ecbfa
·frerot on Nov 23 2017, 12:00.
silencing clang warning
093aa6e808c1
·frerot on Nov 23 2017, 09:24.

Nov 17 2017

added the c++ example in the tests
b95e216370ff
·frerot on Nov 17 2017, 16:23.
updated readme
d8140232cb87
·frerot on Nov 17 2017, 11:32.
recursive apply functor implementation
e88936f5d0fd
·frerot on Nov 17 2017, 10:35.
clang-format on test_model + removed adhesion test from SConscript
2805b1e8fc1f
·frerot on Nov 17 2017, 10:35.
removed unused gpu submodule
ee68e10030dc
·frerot on Nov 17 2017, 10:34.

Nov 16 2017

checking preprocessor header from boost
4a8b7c6bacb3
·frerot on Nov 16 2017, 17:06.
removed adhesion test
48c7fd255339
·frerot on Nov 16 2017, 17:05.
error on cuda + sanitizer
0caaf57a09c8
·frerot on Nov 16 2017, 13:38.

Nov 15 2017

Merge branch 'gpu'
94553e902cb7
·tag: thrust-gpu
·frerot on Nov 15 2017, 17:22.
clearer moments code
d01e5c973ef6
·frerot on Nov 15 2017, 17:08.
added computation of moments (TODO implement correct test)
e5efef4d3c7c
·frerot on Nov 15 2017, 15:29.
minor cleanups
c80cfa59257f
·frerot on Nov 15 2017, 09:40.

Nov 14 2017

correct handling of gradient conditions in PKR
67e961750934
·frerot on Nov 14 2017, 17:36.

Nov 10 2017

updated c++ example
f52d1730a909
·frerot on Nov 10 2017, 16:53.
cleanup useless tests
1003d4e2f177
·frerot on Nov 10 2017, 15:35.
updated readme
67ca4e44cdeb
·frerot on Nov 10 2017, 15:19.
updated readme
166723b40ead
·frerot on Nov 10 2017, 15:18.

Nov 9 2017

clang-format
84f3f89f4f46
·frerot on Nov 9 2017, 14:32.
cleanup + compatibility with clang
bbd990f626b4
·frerot on Nov 9 2017, 14:14.
changed iterator tag to allow thrust algos on device
6fd8e54c11a4
·frerot on Nov 9 2017, 12:59.
saner code (const-correctness + defaults)
9f1e91288a10
·frerot on Nov 9 2017, 11:58.
removed warning
a1637da8edd6
·frerot on Nov 9 2017, 11:56.
clarifying side effects in functionals
b6fe91b593c4
·frerot on Nov 9 2017, 11:09.

Nov 7 2017

added cudaDeviceSynchronize in fft interface
81dd5f04e1bc
·frerot on Nov 7 2017, 16:32.
removed -f options in debug flags for cuda
4c505a4941b5
·frerot on Nov 7 2017, 16:32.
Merge branch 'thrust' of castor.epfl.ch:tamaas into thrust
3a9bbee27fb6
·frerot on Nov 7 2017, 16:24.
added synchronize for fft test
7405d7fd0275
·frerot on Nov 7 2017, 16:22.

Nov 6 2017

added target names {tamaas, wrapper, tests} for scons
a5bb7bf0d05a
·frerot on Nov 6 2017, 16:10.
added target names {tamaas, wrapper, tests} for scons
164d866440c2
·frerot on Nov 6 2017, 11:30.

Nov 5 2017

using instead of typdefs in iterators
e67ad1441169
·frerot on Nov 5 2017, 17:38.
passed clang-format on whole repository
3927fa639a53
·frerot on Nov 5 2017, 11:23.

Nov 3 2017

more readable array
d069f5437129
·frerot on Nov 3 2017, 17:57.
protecting allocator include
e634f0066037
·frerot on Nov 3 2017, 17:33.
adding fftw_malloc for SIMD aligned data allocation
30d402099764
·frerot on Nov 3 2017, 17:30.
device for ApplyConstructor + cudaSync
7043e94a544a
·frerot on Nov 3 2017, 17:00.
consistent apply_functor copies
88e8bc9847bf
·frerot on Nov 3 2017, 15:43.
fixing rvalue functor bug by making copy
4df748b7012f
·frerot on Nov 3 2017, 12:33.

Nov 2 2017

Merge branch 'gpu' into thrust
c6b27f90032a
·frerot on Nov 2 2017, 10:52.
added test for model and influence coeffs
dd65fd640204
·frerot on Nov 2 2017, 10:51.
added c++ tests for fft interface
f676e684c984
·frerot on Nov 2 2017, 10:30.

Nov 1 2017

rewrote loops with thrust
a0869ea06429
·frerot on Nov 1 2017, 18:14.
adding synchronize in test
53b9b1ac6cc4
·frerot on Nov 1 2017, 15:40.
test for loop interface with thrust
93055b409b13
·frerot on Nov 1 2017, 15:39.
small test of thrust capacities
209b1173d70d
·frerot on Nov 1 2017, 15:07.
passing for_each loops tests
b3c9bf19b545
·frerot on Nov 1 2017, 11:59.

Oct 31 2017

make everything compile with -G
8ef9e8b95c5b
·frerot on Oct 31 2017, 18:09.
simplified for testing
b366bc3c68d8
·frerot on Oct 31 2017, 16:58.
removing unused code
2e578b066372
·frerot on Oct 31 2017, 13:37.
getting the cuda loops to compile (return of the lambda)
2be5a950ade8
·frerot on Oct 31 2017, 13:25.
getting the cuda loops to compile
0d1eb492274b
·frerot on Oct 31 2017, 11:45.

Oct 30 2017

trying to adapt code to cuda
c952c8e72bb7
·frerot on Oct 30 2017, 16:13.
removed Loop singleton
d75a65d09d21
·frerot on Oct 30 2017, 09:19.

Oct 28 2017

added some documentation to classes
01bc15346e7f
·frerot on Oct 28 2017, 18:34.
added enumeration helper in Loop
b59fa1b6aab3
·frerot on Oct 28 2017, 18:33.

Oct 27 2017

implemented matrices for strided loops
f31c9478eeb0
·frerot on Oct 27 2017, 16:57.
added strided loops
f76320c57280
·frerot on Oct 27 2017, 16:42.

Oct 26 2017

added Statistics class
0ca44f94ddd0
·frerot on Oct 26 2017, 16:36.
added @file tag for documentation
a79f64962579
·frerot on Oct 26 2017, 11:41.
rewrote polonsky with lambda-loops
a757e2311dc9
·frerot on Oct 26 2017, 11:13.

Oct 25 2017

changed vectorial operators
68d26a7bbdf2
·frerot on Oct 25 2017, 16:56.
c++14 pulls + passing tests
095106192bbb
·frerot on Oct 25 2017, 16:08.
empty line
966c6339c964
·frerot on Oct 25 2017, 12:19.
added loop abstractions
326e0378133b
·frerot on Oct 25 2017, 11:55.

Oct 12 2017

instanciating fftransfromcufft for dims 1 and 3
de2d37bf9bc9
·frerot on Oct 12 2017, 12:58.
modified fftransformcufft for multi-component ffts
221ad73b17f3
·frerot on Oct 12 2017, 12:48.
more modular SConstruct
43e776cc945c
·frerot on Oct 12 2017, 12:15.
Merge branch 'master' into gpu
7c7191a3ac48
·frerot on Oct 12 2017, 10:55.
added detection of cuda on clusters
820a350bce9e
·frerot on Oct 12 2017, 10:52.
update copyright year in model subdir
7c7dc19567c8
·frerot on Oct 12 2017, 09:34.
added gpu to CPPPATH
8cb7ccccec28
·frerot on Oct 12 2017, 09:33.

Oct 11 2017

made tamaas compile with nvcc and custom tool
864dce59b0cf
·frerot on Oct 11 2017, 18:19.
ensure correct dependencies (by copying source)
82094210e0a8
·frerot on Oct 11 2017, 09:55.

Oct 10 2017

Merge branch 'master' of lsmssrv1.epfl.ch:tamaas
43b209bb8954
·frerot on Oct 10 2017, 18:00.
Merge branch 'master' of gitolite:tamaas
64968f9156ef
·anciaux on Oct 10 2017, 17:51.
making it python3 for print function
644138f89dd8
·anciaux on Oct 10 2017, 17:51.
from future import
1f7361fa6457
·anciaux on Oct 10 2017, 17:48.

Sep 27 2017

minor change in Array interface
0f8352bd1e95
·frerot on Sep 27 2017, 15:00.

Historypetsc24c86549be3ebfc81a3f960…

Mar 8 2018

Mar 7 2018

Mar 6 2018

Mar 5 2018

Mar 2 2018

Mar 1 2018

Feb 27 2018

Dec 13 2017

Nov 29 2017

Nov 23 2017

Nov 17 2017

Nov 16 2017

Nov 15 2017

Nov 14 2017

Nov 10 2017

Nov 9 2017

Nov 7 2017

Nov 6 2017

Nov 5 2017

Nov 3 2017

Nov 2 2017

Nov 1 2017

Oct 31 2017

Oct 30 2017

Oct 28 2017

Oct 27 2017

Oct 26 2017

Oct 25 2017

Oct 12 2017

Oct 11 2017

Oct 10 2017

Sep 27 2017

History
petsc24c86549be3ebfc81a3f960…