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Phriction Projects Wikis Bioimaging And Optics Platform Image Processing ImageJ/Fiji ijm-DetectSpots-VoronoiFromNuclei-FISH

Contents

Code
Input
Output

ijm-DetectSpots-VoronoiFromNuclei-FISH
Updated 1,866 Days AgoPublic
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Code

detectSpots_VoronoiFromNuclei.ijm4 KBDownload

Input

Define some parameters :

imagePath
dapiChannel
spotsChannel(s)
colors (detected spots will be annotated as small circle with these colors)
Prominence for Find local maximas
Sigma Blur (optionnal, if above 0 )

Output

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Last Author: romainGuiet
Last Edited: Nov 21 2019, 15:27

Event Timeline

romainGuiet created this document.Nov 14 2019, 16:25

romainGuiet edited the content of this document. (Show Details)

romainGuiet changed the title from Ijm-DetectSpots-VoronoiFromNuclei to Ijm-DetectSpots-VoronoiFromNuclei-FISH.

romainGuiet changed the title from Ijm-DetectSpots-VoronoiFromNuclei-FISH to ijm-DetectSpots-VoronoiFromNuclei-FISH.Nov 21 2019, 15:27