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Diffusion ShoulderDB_ImportSegmentMeasureAnalyze (pezhman_excelExport) Graph

R8218/ShoulderCase
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CommitAuthorDetailsCommitted
02f485383659Pezhman Eghbalishamsabadi/Matthieu Boubat (lbovenus)
Replace ShoulderCase.m 
Apr 13 2021
baab4de282a8Pezhman Eghbalishamsabadi/Matthieu Boubat (lbovenus)
Replace ShoulderCase.m 
Apr 13 2021
3380db517239Pezhman Eghbalishamsabadi/Matthieu Boubat (lbovenus)
Replace ShoulderCase.m 
Apr 13 2021
760312dc35f9boubat
fix: Remove typos. 
Apr 8 2021
1145767ab72dboubat
feat: Add 3D humeral subluxation index measurement. 
Apr 8 2021
6f25c23e0c4eboubat
feat: Add glenoid BETA angle measurement. 
Apr 8 2021
a52c52ee0465boubat
feat: Add three new features to Vector. 
Apr 8 2021
a03fb9943223boubat
feat: Add glenoid rim inclination measurement. 
Apr 8 2021
9341c9dbeba3boubat
feat: Add glenoid retroversion measurement. 
Apr 8 2021
01f18b8b1139boubat
feat: Add three features to the Vector class. 
Apr 8 2021
d7e99d4c0d68boubat
feat: Add the measure of glenoid infero superior line. 
Apr 8 2021
71a2298f35d1boubat
feat: Add the measure of glenoid postero anterior line. 
Apr 8 2021
47bcd381205bboubat
refactor: Modify Friedman's line to be a Vector instance. 
Apr 8 2021
20208d0985c4boubat
feat: Add a basic Vector class. 
Apr 8 2021
56fd32646096Matthieu Boubat (lbovenus)
feat: Add functions to measure muscles centroid and contour coordinates in… 
Apr 1 2021
9fe70821ddb6Matthieu Boubat (lbovenus)
feat: Add two functions to read muscle related segmentation mask and slice… 
Apr 1 2021
23f49df7c6a9Matthieu Boubat (lbovenus)
refactor: Add missing pixel coordinates save. 
Apr 1 2021
cd7e29c50566Matthieu Boubat (lbovenus)
feat: Finish slice pixel coordinates extraction implementation. 
Apr 1 2021
d58ec00b5bacboubat
feat:WIP Add slice's pixel coordinates export. 
Apr 1 2021
792eb24bde0eboubat
feat: Add a method to find the extreme points of the glenoid rim according to… 
Mar 23 2021
b001c7a73902boubat
feat: Add methods to find the rim points of glenoids. 
Mar 23 2021
1b7c0b38b029boubat
feat: Implement the measure of the Friedman's scapular line. 
Mar 22 2021
b04bf8ae5867Matthieu Boubat (lbovenus)
refactor: Remove anonymisation code. 
Feb 16 2021
079b06c8538dMatthieu Boubat (lbovenus)
refactor: Change the output of ShoudlerCaseLoader.loadAllCases() from cell… 
Feb 16 2021
c4f2d93b1eb0Matthieu Boubat (lbovenus)
feat: Add the anonymisation of all the files containing the IPP in the case… 
Jan 12 2021
8ac49aeeca7cMatthieu Boubat (lbovenus)
refactor: Change Logger class last lines to show stop time. 
Jan 11 2021
62cde38bf596Matthieu Boubat (lbovenus)
refactor: Change properties order in getProperties() method. 
Dec 11 2020
5d659a6abe89Matthieu Boubat (lbovenus)
refactor: Update ShoulderCaseAnonymiser. 
Dec 11 2020
20bc822d890cboubat
feat: Fully implement ShoulderCaseAnonymiser. 
Dec 11 2020
384fdd222785boubat
refactor: Allow SCase parser and loader to use string besides char array. 
Dec 10 2020
933aae66307dboubat
feat: Add ShoulderCaseAnonymiser class and implement dicom anonymisation. 
Dec 10 2020
a4fcd36437f5boubat
fix: Revert last modification and add alternate fix to calcDensity(). 
Sep 24 2020
bf01a05dacccboubat
fix: Change wrong array indices in calcDensity. 
Sep 10 2020
b5834eb2162cMatthieu Boubat (lbovenus)
refactor: Remove error logging from inside Nathan algotihm. 
Sep 10 2020
782d0b035f13boubat
feat: Add isempty() method to Sphere class and open class accessibility to… 
Sep 4 2020
d8f3d531ec36boubat
refactor: Add the '_Mask' file terminology in the MuscleMeasurer methods. 
Aug 31 2020
d542f8cdde1fboubat
refactor: Update muscles plot method with nes file names used. 
Aug 31 2020
bb01683906edboubat
refactor: Rename and document the MusclesContainer slicing methods. 
Aug 17 2020
903ac534e00fboubat
feat: Add a function to find the bounding box of a dicom set. 
Aug 14 2020
3fa1591c88a9boubat
refactor: (re)Add the selection of smooth dicom for rotator cuff slices. 
Aug 6 2020
86ab4c9fc0c3boubat
fix: Change verified shoulder in configCamera. 
Aug 6 2020
0013fd4ddd1aboubat
refactor: Modify zoom, light position and default scapula axes in configCamera. 
Aug 5 2020
bfa30844d304boubat
fix: Correct name string in MusclesContainer.plot(). 
Aug 5 2020
47af1ac7f80eboubat
refactor: Update ShoulderCase to SCaseIDParser modifications. 
Aug 5 2020
7568f1ca7ccdboubat
refactor: Change filename creation to use fullfile(). 
Aug 5 2020
be3f45097169boubat
refactor: Add arguments to MusclesContainer methods to choose combinations of… 
Aug 5 2020
453355cdf2e7boubat
refactor: Change displayed scapula surface to be opaque. 
Aug 5 2020
47a8997f16daboubat
refactor: Change displayed scapula surface to be opaque. View axes are now from… 
Aug 5 2020
a7767961504aboubat
feat: Add a method to sort scapula's groove points lateral to medial. 
Aug 4 2020
9c2a857c1e10boubat
refactor: Delete a few commands in ShoulderCasePlotter.plot(). 
Aug 4 2020
01bf191f3e58boubat
refactor: Rename axes initialisation method and add custom toolbar. 
Aug 4 2020
77c8270f788bboubat
feat: Add new buttons to ShoulderCasePlotter. 
Aug 4 2020
3d688f719941boubat
feat: Add camera related methods to ShoulderCasePlotter. 
Aug 4 2020
a6c0ef26a380boubat
refactor: Make SoulderCase.plot return the ShoulderCasePlotter. 
Aug 4 2020
997424434cadboubat
refactor: Update shoulder case plot functions according to AT feddback. 
Jul 31 2020
59e8c1e80ec4boubat
feat: Add methods to Scapula to export its landmakrs into its Amira folder. 
Jul 30 2020
d034858e1cebboubat
feat: Implement methods to export landmarks in Amira file. 
Jul 30 2020
fee8d639a92cboubat
refactor: Update the utilisation of UpdatableText by ShoulderCaseLoader. 
Jul 28 2020
4f06f9735153boubat
refactor: Update UpdatableText. 
Jul 28 2020
764e10153ab1boubat
feat: Add a class to export auto landmarks. 
Jul 28 2020
3b926a83c8d4boubat
refactor: Revert changes from last commit that alters measurements. 
Jul 23 2020
ef22a3fab2abboubat
feat: Updates to work with muscles manual segmentations. 
Jul 23 2020
85705b4acfc2boubat
refactor: Correct displayed sentence. 
Jul 23 2020
b226de094ef2boubat
refactor: Update classes in order to work with ShoulderCasePlotter. 
Jul 23 2020
4432eeac5673boubat
feat: Implement the ShoulderCasePlotter class. 
Jul 23 2020
7f8a638cbe20boubat
refactor: Remove deprecated ShoulderCase plot related functions. 
Jul 23 2020
167e44723504boubat
Merge branch 'boubat' of https://c4science. 
Jul 22 2020
50f61df44b04boubat
refactor: Change properties accessibility to private. 
Jul 22 2020
82f271b12fccboubat
fix: Fix loadAllCases() to actually return the loaded cases. 
Jul 22 2020
7891768d78cbboubat
refactor: Assert that case is found in loadCase() 
Jul 22 2020
0f2e1f6b4147boubat
refactor: Implement a new ShoulderCaseLoader class. 
Jul 22 2020
0d9a87ad20f8boubat
refactor: Remove deprecated classes. 
Jul 22 2020
4c53163888f2boubat
feat: Add class to print updatable message in the command window. 
Jul 22 2020
0696cf43f420boubat
fix: Fix two methods. 
Jul 22 2020
a8418a3b1b1eboubat
refactor: Move function to SCaseIDParser class. 
Jul 22 2020
b7daf62ea39fboubat
feat: Implement plot() method for Glenoid class. 
Jul 20 2020
7b63ff442ae9boubat
fix: Fix typo. 
Jul 7 2020
7337316bd8d8boubat
Merge branch 'boubat' 
Jul 7 2020
54a722355cfbboubat
fix:Scapula: Change the shoulder side selection to load auto landmarks. 
Jul 7 2020
89fc192eeb56boubat
refactor:plot: Enhance and update plot functions of classes. 
Jul 3 2020
e58d4529f576boubat
Merge branch 'boubat' 
Jun 22 2020
63218be9cfdbboubat
doc: Add file destination in createRotatorCuffSlices(). 
Jun 19 2020
92a343b4b0d8boubat
docs: Update or add documentation for all classes in ./ShoulderCase. 
Jun 16 2020
50e9b38f4d45boubat
refactor:CasesFinder: Change concatenation for fullfile() utilization. Add… 
Jun 15 2020
f653ae5039adboubat
refactor:ShoulderCase: Change reference from auto shoulder to manual shoulder… 
Jun 15 2020
1b136b35d37dboubat
refactor:CoordinateSystem: Change how the rotationMatrix is created to avoid… 
Jun 15 2020
6c0cad5b7b18boubat
refactor:ShoulderCase: Update objects structure in appendToCSV() and output()… 
Jun 9 2020
0335f4c37b4aboubat
feat:ShoulderCaseLoader: Add a method to load all the cases in the database. 
Jun 9 2020
9e9dc90cf8c0boubat
feat:MusclesContainer:clearSummary: Implement the empty state of… 
Jun 9 2020
286d8dd80e8aboubat
refactor:MusclesContainer:createRotatorCuffSlices: Throw an error when there is… 
Jun 9 2020
b9fd2d7c524fboubat
refactor:CoordinateSystem: Extract methods toward Scapula and create the… 
Jun 8 2020
6c7ee2e85becboubat
perf:cellArraysDifference: Set new algorithm that takes advantage of builtin… 
Jun 8 2020
29a3fa52703bboubat
fix:ShoulderCaseLoader: Prevent the error due to outdated SCase call to… 
Jun 8 2020
62f58690ff52boubat
files: Move all the classes in their @Class folder. 
Jun 8 2020
7599224428a0boubat
feat:MusclesContainer: Implement isEmpty() class' method and update other… 
Jun 8 2020
9ef4a4460815boubat
refactor:Shoulder: Remove the Muscle addition in Shoulder contructor to prevent… 
Jun 8 2020
57529901bdb2boubat
refactor: Update system to use new muscles classes. 
Jun 5 2020
bfc2bd97ce97boubat
refactor:ShoulderCaseLoader: Split the loadCase method into two. 
Jun 5 2020
cdc2cc5bd1d2boubat
refactor:Shoulder:muscles: Update property to new MusclesContainer class. 
Jun 5 2020
62f82cd4aa84boubat
feat:MusclesContainer:plot: Implement a method that plots segmentation results. 
Jun 5 2020
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