Diffusion ShoulderDB_ImportSegmentMeasureAnalyze (master) History

History
master7685b96f757732265a30c5a…

Aug 4 2021

Merge branch 'rotator_cuff_segmentation_config' into 'master'
7685b96f7577
·boubat on Aug 4 2021, 11:26.
feat: add rotator cuff segmentation config
8deefa5baa32
·Matthieu Boubat (lbovenus) on Aug 4 2021, 11:25.

Jul 28 2021

Merge branch 'insertions_ring' into 'master'
8b040d8ab736
·boubat on Jul 28 2021, 16:13.
feat: implement humeral head insertions ring
276023108883
·Matthieu Boubat (lbovenus) on Jul 28 2021, 16:12.
Merge branch 'amira_landmarks_side' into 'master'
f18477207b2f
·boubat on Jul 28 2021, 14:34.
refactor: update methods to use new methods
b5ed50c425c6
·Matthieu Boubat (lbovenus) on Jul 28 2021, 14:31.
refactor: assert the shoulder side of loaded landmarks
cf82c2a99a42
·Matthieu Boubat (lbovenus) on Jul 28 2021, 14:08.
refactor: check an alternative landmarks file
d477c3fa8a0a
·Matthieu Boubat (lbovenus) on Jul 28 2021, 14:08.
feat: extract method to import amira landmarks
07e7631e7b6c
·Matthieu Boubat (lbovenus) on Jul 28 2021, 13:59.

Jul 27 2021

feat: add methods to check landmarks files existence
13bbab2fbe5e
·Matthieu Boubat (lbovenus) on Jul 27 2021, 17:04.
Merge branch 'muscle_insertion_lateralisation' into 'master'
e7ae2c25e263
·boubat on Jul 27 2021, 16:59.

Jul 26 2021

refactor: change lateralisation algoorithm
bd3db96c7391
·Matthieu Boubat (lbovenus) on Jul 26 2021, 18:49.
feat: add method to lateralise muscle insertion
9c5479fd8746
·Matthieu Boubat (lbovenus) on Jul 26 2021, 18:41.
feat: add method to get normalised Vector
80d6f06d5c15
·Matthieu Boubat (lbovenus) on Jul 26 2021, 18:28.
Merge branch 'muscle_insertion_visualisation' into 'master'
cc98f1adc6f8
·boubat on Jul 26 2021, 18:21.
fix: fix scatter plot marker attributes
60778b05cfb6
·boubat on Jul 26 2021, 18:16.
feat: add muscle insertion in 3d visualisation
618e7df2e42e
·Matthieu Boubat (lbovenus) on Jul 26 2021, 17:43.

Jul 23 2021

fix: fix wrong method call
960be8b10aa2
·Matthieu Boubat (lbovenus) on Jul 23 2021, 14:54.

Jul 22 2021

Merge branch 'muscle_insertions_review' into 'master'
0dde3510025e
·boubat on Jul 22 2021, 17:55.
fix: fix the condition of sphere between points
fd76a341210f
·Matthieu Boubat (lbovenus) on Jul 22 2021, 17:52.
fix: remove typo
68adb3a2fd22
·Matthieu Boubat (lbovenus) on Jul 22 2021, 17:40.
refactor: extract methods
c26cc0fd171f
·Matthieu Boubat (lbovenus) on Jul 22 2021, 12:51.

Jul 21 2021

docs: update README with new config file structure
4d98ccd6d02e
·Matthieu Boubat (lbovenus) on Jul 21 2021, 18:20.

Jul 20 2021

refactor: change supraspinatus insertion
a04668cd5e0d
·Matthieu Boubat (lbovenus) on Jul 20 2021, 14:48.
refactor: extract method and update
f2f6d3662947
·Matthieu Boubat (lbovenus) on Jul 20 2021, 14:22.
refactor: simplify muscle subdivision (1,1) (= no subdivision)
ab3dea3de184
·Matthieu Boubat (lbovenus) on Jul 20 2021, 11:02.

Jul 15 2021

refactor: add try/end to special measurements
bc549d7059de
·Matthieu Boubat (lbovenus) on Jul 15 2021, 17:09.
feat: add method to get contour path
bd0a9cbea179
·Matthieu Boubat (lbovenus) on Jul 15 2021, 11:01.

Jul 14 2021

fix: choose same archive as loadCase() method
03f2e11a7a1b
·Matthieu Boubat (lbovenus) on Jul 14 2021, 11:06.

Jul 13 2021

refactor: change char arrays for strings
b06b59f49927
·Matthieu Boubat (lbovenus) on Jul 13 2021, 14:43.

Jul 2 2021

fix: fix varargin array handling
c091bb75b398
·Matthieu Boubat (lbovenus) on Jul 2 2021, 19:33.
feat: add number of muscle subdivisions in config
f0f61b542b79
·Matthieu Boubat (lbovenus) on Jul 2 2021, 12:58.

Jul 1 2021

Merge branch 'rotator_cuff_imbalance' into 'master'
dd9b02b57467
·boubat on Jul 1 2021, 18:45.
feat: add antero-posterior imbalance measurement in measureSecond
cee10e471694
·Matthieu Boubat (lbovenus) on Jul 1 2021, 18:43.
Merge branch 'utils_refactor' into 'master'
7a7436dee58e
·boubat on Jul 1 2021, 17:32.
refactor: replace Timer with tic() and toc()
9235720d3789
·Matthieu Boubat (lbovenus) on Jul 1 2021, 15:47.
fix: skip objects that are not scalar
eb0ef0cb4571
·Matthieu Boubat (lbovenus) on Jul 1 2021, 13:23.
Merge branch 'muscle_contact_point_review' into 'master'
83a2130902b0
·boubat on Jul 1 2021, 12:20.
fix: fix typo in property access
a9b16e9f1f71
·Matthieu Boubat (lbovenus) on Jul 1 2021, 12:13.

Jun 30 2021

fix: fix typo in iterator creation
3e198561271d
·boubat on Jun 30 2021, 18:18.
refactor: update iterator creation
3a1b0c5185e2
·Matthieu Boubat (lbovenus) on Jun 30 2021, 18:09.
refactor: prevent default subdivisions from being saved
aa17e16f50ee
·Matthieu Boubat (lbovenus) on Jun 30 2021, 18:08.
feat: add default muscle subdivision
5d84dff45ac0
·Matthieu Boubat (lbovenus) on Jun 30 2021, 18:07.
refactor: add specific condition handling
115f22a15e05
·Matthieu Boubat (lbovenus) on Jun 30 2021, 18:06.
fix: avoid error from non-scalar properties
34eaa0230aa9
·Matthieu Boubat (lbovenus) on Jun 30 2021, 18:03.
fix: fix object path in nested properties
dfa2b8679b1b
·Matthieu Boubat (lbovenus) on Jun 30 2021, 18:02.
refactor: set more specific muscle insertions
ef4f372499ab
·Matthieu Boubat (lbovenus) on Jun 30 2021, 13:51.
Merge branch 'humerus_insertions' into 'master'
d32ee1bcc847
·boubat on Jun 30 2021, 13:29.

Jun 29 2021

feat: add segmented insertions in force measurements
6df99684eaec
·Matthieu Boubat (lbovenus) on Jun 29 2021, 15:17.
feat: add method to verbose muscle name
f23bdf0f4130
·Matthieu Boubat (lbovenus) on Jun 29 2021, 15:17.
feat: add muscle insertions in humerus properties
966506e4bb0f
·Matthieu Boubat (lbovenus) on Jun 29 2021, 15:07.

Jun 28 2021

Merge branch 'muscle_clean' into 'master'
8d1aa85f2ffd
·boubat on Jun 28 2021, 17:50.
refactor: remove deprecated function
ccebeccd560a
·Matthieu Boubat (lbovenus) on Jun 28 2021, 17:44.
Merge branch 'feat_muscle_subdivisions' into 'master'
77d59a456131
·boubat on Jun 28 2021, 17:21.
fix: stabilize PCSA over subdivisions
b45679a6b3c9
·Matthieu Boubat (lbovenus) on Jun 28 2021, 17:17.

Jun 24 2021

fix: prevent fully atrophied muscle to raise error
1b58cbda7953
·Matthieu Boubat (lbovenus) on Jun 24 2021, 15:32.
fix: set correct iterator range
282b38575986
·boubat on Jun 24 2021, 14:06.

Jun 23 2021

fix: fix misdivisions of masks including the 0 angle
a262bb9dd300
·boubat on Jun 23 2021, 20:04.
fix: change iterator to follow iterated array
d56230c45d9b
·boubat on Jun 23 2021, 19:56.
fix: change method to work with 1 point array
586913c7c5b5
·boubat on Jun 23 2021, 19:43.

Jun 22 2021

refactor: change property access
12dd8059c31e
·boubat on Jun 22 2021, 19:29.
refactor: make method compliant with subdivisions
e8cc33c17c52
·Matthieu Boubat (lbovenus) on Jun 22 2021, 19:03.
refactor: add rotator cuff force resultant for every subdivision
61d7e7c30acd
·Matthieu Boubat (lbovenus) on Jun 22 2021, 18:54.
refactor: add force vector, taking the degeneration into account, for every…
d2f29cae7c44
·Matthieu Boubat (lbovenus) on Jun 22 2021, 18:33.
refactor: add force application points for every subdivision
c3e0569ea397
·Matthieu Boubat (lbovenus) on Jun 22 2021, 18:26.
refactor: make muscle measurements done for every subdivision
86c6944cab21
·Matthieu Boubat (lbovenus) on Jun 22 2021, 18:21.
refactor: make centroids have the same index as subdivisions
e90ebf090c74
·Matthieu Boubat (lbovenus) on Jun 22 2021, 18:12.

Jun 18 2021

refactor: update method to use muscle subdivisions
897e889584bc
·boubat on Jun 18 2021, 19:35.
refactor: update method to use muscle subdivisions
ba3bb649febc
·boubat on Jun 18 2021, 19:03.
fix: change method used
2e51341bed57
·boubat on Jun 18 2021, 19:02.
feat: implement Muscle subdivision
6f9a8065808b
·boubat on Jun 18 2021, 18:41.
fix: make element consistent with matlab array indexing
455ac22de2b1
·boubat on Jun 18 2021, 18:39.
feat: implement slice point finder
e74a03f54313
·boubat on Jun 18 2021, 18:28.
refactor: increase function scope
c59fda2034c3
·boubat on Jun 18 2021, 17:46.
Merge branch 'feat_muscle_subdivision' into 'master'
2422a095c9ee
·boubat on Jun 18 2021, 15:35.
feat: add a stacked version of subdivisions
08f73692c20f
·Matthieu Boubat (lbovenus) on Jun 18 2021, 15:27.
refactor: change subdivisions boundaries creation
b9676107c82a
·Matthieu Boubat (lbovenus) on Jun 18 2021, 15:26.
feat: implement mask subdivision
63c45a478235
·Matthieu Boubat (lbovenus) on Jun 18 2021, 14:46.
refactor: adapt property name to property utilisation
3228e812a765
·Matthieu Boubat (lbovenus) on Jun 18 2021, 14:43.
feat: add radial division mask method
63277cb396d8
·Matthieu Boubat (lbovenus) on Jun 18 2021, 10:59.
refactor: simplify method name
f26d0d8bd1a8
·Matthieu Boubat (lbovenus) on Jun 18 2021, 10:52.
refactor: add grid properties and extract method to measure them
05c64083ab7b
·Matthieu Boubat (lbovenus) on Jun 18 2021, 10:50.

Jun 17 2021

feat: add angular division mask method
622c8d0ee4c1
·Matthieu Boubat (lbovenus) on Jun 17 2021, 19:32.
feat: implement MaskSubdivider construction
ea0fec6a5204
·Matthieu Boubat (lbovenus) on Jun 17 2021, 19:31.
Merge branch 'refactor_muscle_measurement' into 'master'
57a091c63bf8
·tag: v2.0.0
·boubat on Jun 17 2021, 17:17.
refactor: decouple MuscleMeasurer from Muscle
7a40eb3227b9
·Matthieu Boubat (lbovenus) on Jun 17 2021, 16:42.
refactor: extract method
858f43d3dce6
·Matthieu Boubat (lbovenus) on Jun 17 2021, 16:41.

Jun 16 2021

Merge branch 'feat_humerus_3d_index' into 'master'
6c0544dfd86c
·boubat on Jun 16 2021, 16:44.
feat: add measurement in measureSecond()
129469e1727e
·Matthieu Boubat (lbovenus) on Jun 16 2021, 16:04.
Merge branch 'refactor_glenoid_data_loading' into 'master'
5f4ceb217c3a
·boubat on Jun 16 2021, 15:17.
refactor: extract methods to load Glenoid data
9327d4667441
·Matthieu Boubat (lbovenus) on Jun 16 2021, 15:11.

Jun 11 2021

feat: add lsit of cases to measure in default config setup
e38e71843c0e
·Matthieu Boubat (lbovenus) on Jun 11 2021, 01:22.
feat: add logging in special measurements
f64b2479e904
·Matthieu Boubat (lbovenus) on Jun 11 2021, 01:21.
fix: remove duplicate implementation of methods
98f0f43e1169
·Matthieu Boubat (lbovenus) on Jun 11 2021, 01:16.
refactor: extract method to save all SCases in one file
0da0b66d0343
·Matthieu Boubat (lbovenus) on Jun 11 2021, 00:49.
fix: add properties that were wrongly removed
e50767eeed13
·Matthieu Boubat (lbovenus) on Jun 11 2021, 00:06.

Jun 10 2021

refactor: remove unused third measurement recursive method
782f6576c101
·Matthieu Boubat (lbovenus) on Jun 10 2021, 23:54.
Merge branch 'plot_review' into 'master'
c2240235c869
·boubat on Jun 10 2021, 23:46.
refactor: update scapula differences plot to use sided shoulders
149f8321fbc1
·boubat on Jun 10 2021, 23:44.
refactor: update shoulder case plot methods to handle right and left shoulders
8bbb6e46983b
·boubat on Jun 10 2021, 23:44.

Historymaster7685b96f757732265a30c5a…

Aug 4 2021

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History
master7685b96f757732265a30c5a…