Diffusion akantu (bugfixes/Unexpected-behaviour-in-energy-computation-structural-model) History

History
bugfixes/Unexpected…525799376c2ec967ae62e32…

Nov 27 2019

Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
525799376c2e
·richart on Nov 27 2019, 15:44.
correcting some tests
c4cc4b4c47dd
·richart on Nov 27 2019, 15:38.
Storing step before solve restoring if solve failed
2d7706576326
·richart on Nov 27 2019, 15:38.
Updating cmake
3b5ad8bc6ce8
·richart on Nov 27 2019, 15:38.
Rewriting the mesh to dual graph generation algorithm
e0974cf6bcc5
·richart on Nov 27 2019, 15:38.
Some cleaning and modernization of the code
ba6837e25b9b
·richart on Nov 27 2019, 15:38.
don't cut the branch on which you sit
657da1256e23
·richart on Nov 27 2019, 14:23.
moved an output file
9597c2542bdf
·richart on Nov 27 2019, 14:17.
minor corrections
c8376fd17f15
·richart on Nov 27 2019, 14:10.
Merge branch 'master' of c4science:/diffusion/AKAPRIV/akantu-private
6fc95097d887
·richart on Nov 27 2019, 14:06.

Nov 11 2019

Adding docker images
a3683ff5a8e8
·richart on Nov 11 2019, 16:47.
Cleaning debug couts
136fdff461b8
·richart on Nov 11 2019, 16:28.
Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
d5d5d6d0ef46
·richart on Nov 11 2019, 16:05.
Cleaning unused parameters
295fdd9828a3
·richart on Nov 11 2019, 16:03.
Adding finite deformation materials to patch tests
520fbdda217e
·richart on Nov 11 2019, 16:03.
Adding finite deformation test
4985f7e03bfc
·richart on Nov 11 2019, 16:02.
aka_iterators simplification
5d8a10395816
·richart on Nov 11 2019, 16:01.

Nov 7 2019

adding the meshdatamaterialselector handling
1679e030bb0f
·anciaux on Nov 7 2019, 22:17.
Merge branch 'master' of ssh://c4science.ch/diffusion/AKAPRIV/akantu-private
c4af0da6117d
·anciaux on Nov 7 2019, 22:16.
Change default to simplify integration
dc4c38ffa3dd
·richart on Nov 7 2019, 17:28.

Nov 6 2019

Correcting bug introduced in rAKAPRIVe3715c23639b
1d436d1e0a06
·richart on Nov 6 2019, 16:57.
adding a feature for node groups
18549d2da848
·anciaux on Nov 6 2019, 15:45.
add library dependence for aka pybind
f4a623ac3799
·anciaux on Nov 6 2019, 14:56.
adding possibilities for the element/node groups
33b2a21d75fa
·anciaux on Nov 6 2019, 14:40.
Adding more missing files
7a6ed39f0500
·richart on Nov 6 2019, 14:33.
Adding missing file
85ac96c4376b
·richart on Nov 6 2019, 14:29.

Nov 1 2019

policy CMP0077
f4dc9f79613b
·richart on Nov 1 2019, 11:17.
Including akantu_iterators as a sub project
78e134e83f4d
·richart on Nov 1 2019, 11:17.

Oct 30 2019

modify gitignore
8c9a9413ebc1
·richart on Oct 30 2019, 16:36.
Add 'third-party/akantu_iterators/' from commit…
ad16c438b134
·richart on Oct 30 2019, 16:33.
cleaning repo to move to sub repo
5cff0fa4bf8f
·richart on Oct 30 2019, 16:32.
Bug fix for cmake > 3.11
e3715c23639b
·richart on Oct 30 2019, 16:15.
Minor change to limit the number of cores for the tests
56255d81fade
·richart on Oct 30 2019, 16:14.

Oct 28 2019

Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
7f3d662810a7
·richart on Oct 28 2019, 21:26.
Make akantu compile again on ubuntu xenial
67bc28894cfb
·richart on Oct 28 2019, 21:24.

Oct 24 2019

Activating tests
7f23c307f1b4
·richart on Oct 24 2019, 00:06.

Oct 23 2019

adding linters
13d68d30eedc
·richart on Oct 23 2019, 23:59.
moving ci files
e11edcd7e66d
·richart on Oct 23 2019, 23:52.
Adding jenkinsfile
26ce4be418ac
·richart on Oct 23 2019, 23:27.
Add 'test/ci/' from commit 'e20109b241d517abe8e2869216562914ee05aaf3'
26c5b9e06429
·richart on Oct 23 2019, 23:20.
initial commit
0d5687c171e7
·richart on Oct 23 2019, 22:49.

Oct 10 2019

fix bug on the group manager python interface
98e31aa37f35
·anciaux on Oct 10 2019, 16:27.

Oct 4 2019

onElementAdded only for elements of the correct dimension
5dcbd68a7b1a
·richart on Oct 4 2019, 17:09.
Moving the flipFacet call to the mesh facet creation code
dd086a28369f
·richart on Oct 4 2019, 16:50.
minor enhancements
d95b4e96bb27
·richart on Oct 4 2019, 15:59.
adding info to mesh events
ff09fbb08786
·richart on Oct 4 2019, 15:58.
Tangent matrix re-computation a bit more clever
afa9cc913c79
·richart on Oct 4 2019, 15:57.

Oct 1 2019

Merge branch 'master' of ssh://c4science.ch/diffusion/AKAPRIV/akantu-private
7d424091fb1d
·anciaux on Oct 1 2019, 17:57.

Sep 27 2019

dirty hack to allow to dump a numpy array
a7432c4bab43
·anciaux on Sep 27 2019, 21:49.
saving the test for large rotations
442a2f57fe23
·anciaux on Sep 27 2019, 21:46.
temporary fix to pass a numpy to be dumped
baac59a38a62
·anciaux on Sep 27 2019, 21:45.
adding a adddumpfieldexternal
aaddfc6e06ae
·anciaux on Sep 27 2019, 14:57.

Sep 24 2019

adding the example on finite rotation in dynamics
dcc281330a72
·anciaux on Sep 24 2019, 22:17.
Add 'test/ci/scripts/' from commit 'e20109b241d517abe8e2869216562914ee05aaf3'
0ef5d87d9034
·richart on Sep 24 2019, 11:13.
splitting repositories
b6a4af4f0f62
·richart on Sep 24 2019, 11:13.
arclinting arclint.py
e20109b241d5
·richart on Sep 24 2019, 11:09.
cleaning usless files
5d294161d2fc
·richart on Sep 24 2019, 11:02.
preparation to split hbm scripts in a different project
aaace74d37ac
·richart on Sep 24 2019, 10:56.
preparation to split hbm scripts in a different project
9b0b8a6b22b2
·richart on Sep 24 2019, 10:56.
Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
f000ed9c0072
·richart on Sep 24 2019, 10:46.

Sep 23 2019

added parser for junit in harbormaster ci scripts
07f320d9a304
·frerot on Sep 23 2019, 15:45.
added parser for junit in harbormaster ci scripts
e28fc6cfa113
·frerot on Sep 23 2019, 15:45.

Sep 17 2019

bug in the interface
c59021d18d8e
·richart on Sep 17 2019, 17:03.
Bug fix in exclusiveScan in sequential
60e435467a35
·richart on Sep 17 2019, 13:09.

Sep 4 2019

cleaning the code
863d3f407e40
·richart on Sep 4 2019, 17:41.

Aug 27 2019

Do not compute shape derivatives on all type in onElementsAdded
f7fc640b45bc
·richart on Aug 27 2019, 16:55.
linting to make jenkins happy again
155d19a093b4
·richart on Aug 27 2019, 16:33.
missed the structural shape functions
8fec248f8b4b
·richart on Aug 27 2019, 16:32.
Limiting the shape functions and integrator to one dimension
5a28b410980b
·richart on Aug 27 2019, 16:19.

Aug 21 2019

modernizing the code
3d0f16c20130
·richart on Aug 21 2019, 12:47.
adding some debugging
69c31979d23a
·richart on Aug 21 2019, 12:47.
Copying missing file
ed1ff98d1761
·richart on Aug 21 2019, 12:47.
Material selector test correction
0ece01843256
·richart on Aug 21 2019, 12:46.

Aug 20 2019

bug fix in the profil construction
a58bd8d06aea
·richart on Aug 20 2019, 16:21.
Removing useless function + bug fix
912d812b730d
·richart on Aug 20 2019, 16:08.

Aug 14 2019

trying to compensate google breaking compatibility without change version…
2efd36a3d807
·richart on Aug 14 2019, 18:54.
Correcting python examples
d5f9aba7e9d9
·richart on Aug 14 2019, 18:21.
adding types capabilities
534c6752bee0
·richart on Aug 14 2019, 18:20.
Correcting some stuff in the dumpers
a55298ef88a1
·richart on Aug 14 2019, 18:19.
merge ?
5f1fc7d7197c
·richart on Aug 14 2019, 17:08.
Modified pybind11 to work also with 2.3
8fb402aea0a1
·richart on Aug 14 2019, 15:33.
Merge branch 'master' of ssh://c4science.ch/diffusion/AKAPRIV/akantu-private
8ec6afee0ae1
·frerot on Aug 14 2019, 10:27.

Aug 13 2019

protected pybind tests if python interface is not activated
c133939b4175
·frerot on Aug 13 2019, 11:05.

Aug 9 2019

made the getNbDataPerElem more generic
7c4625ecd4a8
·richart on Aug 9 2019, 19:17.

Aug 6 2019

Updating the doc for external dumpers
dbdc45a8aac7
·richart on Aug 6 2019, 14:04.

Jul 23 2019

Make tests faster by not running the examples
31edf7c58312
·richart on Jul 23 2019, 10:30.

Jul 19 2019

Adding more options to ci
2e0de6f355e9
·richart on Jul 19 2019, 18:08.
backward compatibility for pybind11 interface
66e096390ab1
·richart on Jul 19 2019, 18:03.
Correcting some examples
b2a2f97d97ac
·richart on Jul 19 2019, 18:03.
run parallel examples with mpi
cca380adb866
·richart on Jul 19 2019, 16:34.
arc lint --everything
7863d49f001b
·richart on Jul 19 2019, 16:32.
arc lint --everything
fe2c711063a8
·richart on Jul 19 2019, 16:32.
Making examples testable (just running them nothing fancy)
cb52825d7599
·richart on Jul 19 2019, 16:09.
adapt to latest changes
1e85232f7ebf
·richart on Jul 19 2019, 12:09.
removed unused variables
10c49fba4670
·richart on Jul 19 2019, 12:08.
Trying to figure out the checkout
9b6b46814f0d
·richart on Jul 19 2019, 10:26.

Jul 18 2019

more synthax errors
d6e9f68dd00a
·richart on Jul 18 2019, 16:45.
Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
5e4f8ff24796
·richart on Jul 18 2019, 16:44.
bug in synthax
ebea3132a246
·richart on Jul 18 2019, 16:44.
Checkout proper commit
c2fe86fb4370
·richart on Jul 18 2019, 16:42.

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History
bugfixes/Unexpected…525799376c2ec967ae62e32…