Diffusion akantu (bugfixes/installation-instructions) History

rAKA/python
bugfixes/installation…970ac3e26845d6da0e19f98…

Nov 27 2019

Updating cmake
970ac3e26845
·richart on Nov 27 2019, 15:38.

Nov 11 2019

Cleaning debug couts
cab6f9eb1023
·richart on Nov 11 2019, 16:28.

Nov 7 2019

adding the meshdatamaterialselector handling
ea9f5da46600
·anciaux on Nov 7 2019, 22:17.
Merge branch 'master' of ssh://c4science.ch/diffusion/AKAPRIV/akantu-private
ee1dff673661
·anciaux on Nov 7 2019, 22:16.

Nov 6 2019

Correcting bug introduced in rAKAPRIVe3715c23639b
d5e1ffd77387
·richart on Nov 6 2019, 16:57.
adding a feature for node groups
04aac09fe6af
·anciaux on Nov 6 2019, 15:45.
add library dependence for aka pybind
c8da98a363fb
·anciaux on Nov 6 2019, 14:56.
adding possibilities for the element/node groups
81356e7a12a0
·anciaux on Nov 6 2019, 14:40.

Oct 30 2019

Bug fix for cmake > 3.11
5c6d9f803c20
·richart on Oct 30 2019, 16:15.

Oct 28 2019

Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
147e1270d175
·richart on Oct 28 2019, 21:26.
Make akantu compile again on ubuntu xenial
7d5788cb11eb
·richart on Oct 28 2019, 21:24.

Oct 10 2019

fix bug on the group manager python interface
bbbac31366b5
·anciaux on Oct 10 2019, 16:27.

Sep 27 2019

dirty hack to allow to dump a numpy array
52e99b106601
·anciaux on Sep 27 2019, 21:49.
saving the test for large rotations
5ad2b577d899
·anciaux on Sep 27 2019, 21:46.
temporary fix to pass a numpy to be dumped
f4c238d2be5e
·anciaux on Sep 27 2019, 21:45.
adding a adddumpfieldexternal
d1ff1a8538d2
·anciaux on Sep 27 2019, 14:57.

Sep 17 2019

bug in the interface
4b00ed89f550
·richart on Sep 17 2019, 17:03.

Aug 14 2019

Modified pybind11 to work also with 2.3
1b5c0762adf5
·richart on Aug 14 2019, 15:33.

Jul 19 2019

backward compatibility for pybind11 interface
d0573c64ba77
·richart on Jul 19 2019, 18:03.
Correcting some examples
d813e3429b63
·richart on Jul 19 2019, 18:03.
arc lint --everything
5cf490a6c1b7
·richart on Jul 19 2019, 16:32.

Jul 16 2019

bug fix in the model interface pybind11
19bbbf9189bb
·richart on Jul 16 2019, 11:33.

Jul 4 2019

Allowing to call the solver with a different solver callback
090fcb7b6683
·richart on Jul 4 2019, 14:50.

Jun 16 2019

Bug fix on static patch tests
870eeccd5cd4
·richart on Jun 16 2019, 21:23.
Bug fix in the python patch tests
4bf5f548d40e
·richart on Jun 16 2019, 20:10.
Bug fixing in the python interface
7bf5844d231d
·richart on Jun 16 2019, 14:52.
Merge branch 'features/pybind11' of c4science:/diffusion/AKAPRIV/akantu-private…
7211363d92dc
·richart on Jun 16 2019, 12:50.

Jun 15 2019

Merge branch 'master' into features/pybind11
604abe561a78
·richart on Jun 15 2019, 18:24.

Jun 14 2019

added the possibility to build dumper::Field in python
2249f672325a
·anciaux on Jun 14 2019, 15:28.

Jun 12 2019

Fixing bugs in parallel:
0c6888ff380d
·richart on Jun 12 2019, 18:29.

Jun 5 2019

Repairing some swig things
d615f3390f78
·richart on Jun 5 2019, 19:38.
Merge branch 'master' into features/petsc
00ca1e91f39a
·richart on Jun 5 2019, 17:47.

Jun 2 2019

Bug fix in the MSH reader version 4
02f245d81e99
·richart on Jun 2 2019, 20:49.

May 14 2019

adding a few methods for solidmechanics model
f80acecf97a9
·anciaux on May 14 2019, 12:34.

May 10 2019

heat transfer patch test working
d3b1deda3441
·anciaux on May 10 2019, 10:44.

May 9 2019

adding the heat transfert interface
76529bcddfd3
·anciaux on May 9 2019, 16:39.
revert the BC namespace
0781d52fe548
·anciaux on May 9 2019, 15:22.
sparse matrix example working in pybind
42e787f146b2
·anciaux on May 9 2019, 14:55.
towards sparsematrix
78bf3a3329f0
·anciaux on May 9 2019, 14:20.
removing swig
c4e9e7754ea5
·anciaux on May 9 2019, 13:15.
complement the python interface
c54a4f4fa6d8
·anciaux on May 9 2019, 12:17.

May 8 2019

bind node/element groups
52084c9fb8e1
·anciaux on May 8 2019, 16:25.
remove nonexisting call in the pybind interface
18fb3fce3807
·anciaux on May 8 2019, 15:12.
Merge branch 'master' into features/pybind11
b714ad9efc75
·anciaux on May 8 2019, 13:11.
adding element group and prepare pytest
d351f96065bd
·anciaux on May 8 2019, 13:07.

May 7 2019

finish binding of cohesive models
a422a7b13ebc
·anciaux on May 7 2019, 17:59.
binding the solidmechanicsmodelcohesive
abd941928906
·anciaux on May 7 2019, 17:42.

May 6 2019

working materials
9833fc65b35d
·anciaux on May 6 2019, 17:39.

May 3 2019

working bi-material example with custom material in pybind
e9f7ee81b60b
·anciaux on May 3 2019, 17:40.
splitting files for the parser
e1acec406fab
·anciaux on May 3 2019, 14:40.
splitting the files
970f04df772b
·anciaux on May 3 2019, 14:22.
fix bi-material example for pybind
5afcb7f4f455
·anciaux on May 3 2019, 10:00.

May 2 2019

correct the initialization problem with materials
65765c982174
·anciaux on May 2 2019, 17:19.

Apr 16 2019

still working on the materials for python
077e6bd1fe54
·anciaux on Apr 16 2019, 16:08.

Apr 12 2019

started the dev of the materials in python
d080b4d9c04b
·anciaux on Apr 12 2019, 17:39.
tests good for array, vector and matrix
30760ecd56c3
·anciaux on Apr 12 2019, 17:07.
adding test and dynamic example now working
171761bb304c
·anciaux on Apr 12 2019, 12:34.

Apr 9 2019

fix a compilation problem due to file removal
08d3806af858
·anciaux on Apr 9 2019, 13:45.
good first state for pybind
060a9a2f14c7
·anciaux on Apr 9 2019, 13:41.
added solidmechanics bcs mesh model
35c9ed6aaf3f
·anciaux on Apr 9 2019, 11:38.

Mar 26 2019

modifying the swig temporarily to have access to aij sparse matrices
14d9e2d154f1
·anciaux on Mar 26 2019, 23:27.

Mar 20 2019

setting rpath for python extension
de71b7128786
·frerot on Mar 20 2019, 14:25.

Feb 26 2019

exposing partitionate parameters in distribute
b56f231301db
·richart on Feb 26 2019, 12:49.

Feb 6 2019

Correcting examples and tests
8ba22a520261
·D197
·fouad / richart on Feb 6 2019, 15:33.

Dec 28 2018

adding bool as a mesh_data
ff847e3b7b21
·richart on Dec 28 2018, 14:54.

Dec 12 2018

Merge branch 'master' of c4science:/diffusion/AKAPRIV/akantu-private
b40b27462bba
·richart on Dec 12 2018, 15:41.

Nov 6 2018

Bug fix in python interface
8694c737de99
·richart on Nov 6 2018, 20:23.
solved some swig issues
cff39378c9ad
·richart on Nov 6 2018, 17:02.

Oct 31 2018

Bootstraping the pybind11 code
02325164e1bd
·richart on Oct 31 2018, 10:30.

Oct 16 2018

Adding computeBarycenters to the python interface
d7b94b74fcf8
·richart on Oct 16 2018, 18:16.

Oct 10 2018

Merge branch 'features/pbc'
057a7338660e
·richart on Oct 10 2018, 10:26.

Sep 25 2018

Adding the mesh nodal data to the python interface
caa62dff9737
·richart on Sep 25 2018, 17:39.

Aug 29 2018

Adding some functions in the python interface
0652e679fb0b
·richart on Aug 29 2018, 14:08.

Aug 14 2018

modified fe_engine python interface
40cfe4f7da48
·richart on Aug 14 2018, 17:55.

May 30 2018

Removing warning while compiling mpi interface
c318c35f852e
·richart on May 30 2018, 14:40.

May 1 2018

added physical names selector to python interface
d9fdcb3cdbc4
·frerot on May 1 2018, 15:50.
removed import mpi4py from python module
8672f3bc3de9
·frerot on May 1 2018, 15:50.

Apr 4 2018

spacial direction ?
9f53e5ba4507
·richart on Apr 4 2018, 17:07.
Adding a full blown object to treat bounding boxes
7c6df5f55619
·richart on Apr 4 2018, 17:07.

Mar 27 2018

Minor changes int the python insterface
6037ec685449
·richart on Mar 27 2018, 17:02.
is_extrinic in python
0c2f0824a102
·richart on Mar 27 2018, 15:23.

Mar 20 2018

give access to solve step of a given solver
9584d3d2e551
·anciaux on Mar 20 2018, 17:36.

Mar 11 2018

Cleaning swig warnings at compilation
6cffe42f3520
·richart on Mar 11 2018, 19:01.

Mar 4 2018

Compilation warning with clang
c2f7903be8e1
·richart on Mar 4 2018, 03:42.

Feb 27 2018

Correcting initialization of python patch tests
8e040ff8a6a9
·richart on Feb 27 2018, 12:32.

Feb 23 2018

correcting minor python stuff
67e95140ade7
·richart on Feb 23 2018, 14:59.

Feb 8 2018

python interface bug fix
1d5e082c07fe
·anciaux on Feb 8 2018, 15:28.
python patch tests in good shape
0a609f2889ab
·anciaux on Feb 8 2018, 11:38.

Feb 7 2018

extend heat transfer
a7820573fdb1
·anciaux on Feb 7 2018, 19:25.
python unittest for patchtest
e240d551c65f
·anciaux on Feb 7 2018, 16:38.

Feb 6 2018

intFull in python common to all models
3c3799e4a74a
·richart on Feb 6 2018, 14:32.

Feb 5 2018

Bug fix in python interface:
d4d469a80eb9
·richart on Feb 5 2018, 13:21.
Corrections for the python interface
562758ad506e
·richart on Feb 5 2018, 00:08.

Feb 4 2018

Updating the swig code for cohesive structural and heat transfer models
bfb03566f26a
·richart on Feb 4 2018, 15:31.
Making use of the preferred version for python in CMake files
1c25df44bc19
·richart on Feb 4 2018, 15:30.

Feb 2 2018

almost there in the python interface
024b99a19433
·anciaux on Feb 2 2018, 17:37.
working newmark examples with python interface
296b4f995f16
·anciaux on Feb 2 2018, 16:52.
compiling python interface: runtime=getMass problem
11f5bf3c54ae
·anciaux on Feb 2 2018, 15:56.

Feb 1 2018

python interface compiling: need to check compatibility with scripts
9534c7dd286a
·anciaux on Feb 1 2018, 10:47.
include the python interface modifications: compiles again
8f49e481521f
·anciaux on Feb 1 2018, 09:21.