Diffusion akantu (features/changes-to-address-joss-review) History

History
features/changes-to…8185a160038c6d185b98a0b…

Apr 28 2022

Merge branch 'bugfixes/detect_mixed_distributed_initialization' into 'master'
8185a160038c
·richart on Apr 28 2022, 09:55.
Apply 1 suggestion(s) to 1 file(s)
96dbd1c1c33c
·branch: bugfixes/detect_mixed_distributed_initialization
·richart / phimuell on Apr 28 2022, 07:20.

Apr 27 2022

Merge branch 'bugfixes/39-the-python-example-for-phasefield-are-broken-due-to-a…
392f7c3dd293
·richart on Apr 27 2022, 16:12.
Fixed a bug.
b64239f821f0
·Philip Mueller, HS on Apr 27 2022, 10:13.
Apply 1 suggestion(s) to 1 file(s)
570532b271ab
·richart / phimuell on Apr 27 2022, 10:06.
Applied more of Nicolas' suggestions.
3db0cf5502c7
·Philip Mueller, HS on Apr 27 2022, 09:59.
Addessed several of Nicolas' comments on GitLab.
678ec54b220c
·Philip Mueller, HS on Apr 27 2022, 09:03.

Apr 26 2022

Adding the default argument to `setIntegrationScheme`
489f68024a53
·branch: bugfixes/39-the-python-example-for-phasefield-are-broken-due-to-a-change-to-setintegrationscheme
·richart on Apr 26 2022, 22:01.

Apr 8 2022

Merge branch 'bugfixes/65-Making-the-integrators-available-in-Python' into…
af00844e74fe
·anciaux on Apr 8 2022, 11:10.

Mar 30 2022

Fixed some compilation errors in the `python/py_integration_scheme.cc` file.
522a8942da5d
·branch: bugfixes/65-Making-the-integrators-available-in-Python
·Philip Mueller, HS on Mar 30 2022, 12:47.
Fixed the CMake of the Python interface.
6864c9ffb9ca
·Philip Mueller, HS on Mar 30 2022, 10:56.

Mar 20 2022

Added a test for the new event.
7a3e0505d63f
·Philip Mueller, HS on Mar 20 2022, 16:49.
Updated the `DOFManager`, regarding the new event `MeshIsDistributedEvent`.
f01a71ed88a5
·Philip Mueller, HS on Mar 20 2022, 16:48.
Added a new mesh event for the case when the `Mesh` is set to be distributed.
aaed29043102
·Philip Mueller, HS on Mar 20 2022, 16:48.

Mar 18 2022

Making IntegratorScheme available in python
7c8e3eb1d349
·richart on Mar 18 2022, 16:04.

Mar 15 2022

Added a check to the `initFullImpl()` function of the `Model` to check the…
0dbef4831570
·Philip Mueller, HS on Mar 15 2022, 07:46.
Updated the Python interface of the `Mesh`.
1777d544246a
·Philip Mueller, HS on Mar 15 2022, 07:45.
Updated the `SolverVector` Interface.
a1120eb7be62
·Philip Mueller, HS on Mar 15 2022, 07:43.

Feb 18 2022

Merge branch 'features/missing-python-interface-for-mesh-data' into 'master'
f2068e9a8030
·tag: v4.0.1-pre2
·tag: v4.0.1
·richart on Feb 18 2022, 12:26.

Feb 10 2022

More typo in FindMumps
0262abf49444
·richart on Feb 10 2022, 14:01.
Code cleaning and debuging after rebase
e2b2f0ed2cc1
·richart on Feb 10 2022, 11:57.
Modified for clang outputs
f4c285cd20f1
·richart on Feb 10 2022, 10:04.
Defining a Manjaro docker that has akantu dependencies
4153dbf7c71d
·richart on Feb 10 2022, 09:58.
Detecting presence of pybind11
950df4181187
·richart on Feb 10 2022, 09:58.
Improving MUMPS detection
6d5f097ba1eb
·richart on Feb 10 2022, 09:58.
Typo and adding non deprecated version of variables
2c4fe29b9c9b
·richart on Feb 10 2022, 09:52.
Forcing skip_mpi_cxx in a way to not generate a warning
b095aa804ace
·richart on Feb 10 2022, 09:52.
Forcing MPI to look only for the needed langagues
de3f2a32afcc
·richart on Feb 10 2022, 09:52.
Implemented inflate which does the opposite of flatten
677ca31609cb
·richart on Feb 10 2022, 09:52.
Typo WARN -> WARNING
4d99cf952ec7
·richart on Feb 10 2022, 09:52.
Missing return statement
45ad4bb227b1
·richart on Feb 10 2022, 09:52.
Adding warnings on operator=
bf02562f93cf
·richart on Feb 10 2022, 09:52.
py::kw_only is pybind11 2.9
9661224b8806
·richart on Feb 10 2022, 09:52.
Adding operator= to ElementTypeMapArray
a52962367d43
·richart on Feb 10 2022, 09:52.
adding missing functions to the python interface
8a1376f66a9f
·richart on Feb 10 2022, 09:52.
Material name not set properly when using registerNewMaterial
4807036100eb
·richart on Feb 10 2022, 09:52.
Updated the Python interface of the solid mechanic model.
cdbd97116d13
·Philip Mueller, HS / richart on Feb 10 2022, 09:52.
Updated the Python interface of the material.
a9e5d4c6350f
·Philip Mueller, HS / richart on Feb 10 2022, 09:52.
Updated the Python interface of the parser.
0f10ebd6aa4f
·Philip Mueller, HS / richart on Feb 10 2022, 09:52.
Updated the Python interface of the ElementTypeMap
c6b4c9d7204a
·Philip Mueller, HS / richart on Feb 10 2022, 09:52.
Merge branch 'bugfixes/flatten-internal-that-are-missing' into 'master'
9111b7503104
·richart on Feb 10 2022, 09:39.
Merge branch 'bugfixes/python_interface_energy_computations' into 'master'
26cd3a43fc8e
·richart on Feb 10 2022, 09:38.
Merge branch 'bugfixes/macos-compilation' into 'master'
ad183be1801f
·richart on Feb 10 2022, 09:37.

Feb 3 2022

Macos runner is only a beta for now
a93d28df4d6e
·branch: bugfixes/macos-compilation
·richart on Feb 3 2022, 09:28.

Feb 2 2022

Enforce MUMPS to be loaded last
bc1fa22d87db
·richart on Feb 2 2022, 19:06.
Test to run on the shared-macos runner
f693b3f65b43
·richart on Feb 2 2022, 17:17.
Making it possible to declare list of symbols and adding regexp for macos
bb4b04c3803b
·richart on Feb 2 2022, 17:13.
Fixed finding of mumps
96c9e7c84526
·hnat_lesiv on Feb 2 2022, 15:13.

Jan 21 2022

Merge branch 'features/mesh-periodic-info-in-python' into 'master'
ea422d3afcc1
·tdroch on Jan 21 2022, 15:18.

Jan 20 2022

Merge branch 'master' into features/mesh-periodic-info-in-python
28ddb633daa4
·branch: features/mesh-periodic-info-in-python
·Nicolas Richart on Jan 20 2022, 20:36.
Merge branch 'master' into bugfixes/python_interface_energy_computations
f62223fca929
·branch: bugfixes/python_interface_energy_computations
·Nicolas Richart on Jan 20 2022, 16:48.
Adding PeriodicSlaves and removing method that returns a unordered_multimap
06016ce80fae
·Nicolas Richart on Jan 20 2022, 16:44.
Merge branch 'master' into features/mesh-periodic-info-in-python
4e311a5e5310
·Nicolas Richart on Jan 20 2022, 14:14.

Jan 19 2022

Merge branch 'bugfixes/python_package_test' into 'master'
2a21aeb28190
·richart on Jan 19 2022, 15:31.
Correcting the tests for the python package
3d9e8d2ee369
·richart on Jan 19 2022, 15:31.
Adding the version of getPotentialEnergy by element_type
3c331277e5d9
·Nicolas Richart on Jan 19 2022, 09:47.
Added a missing function to the Python interface of the material.
46b653b86fe8
·Philip Mueller, HS / Nicolas Richart on Jan 19 2022, 09:25.
This commit fixes a problem in the Python interface of the material regarding…
d829bf5a7799
·Philip Mueller, HS / Nicolas Richart on Jan 19 2022, 09:25.

Jan 17 2022

Remove `except tags` in the configuration steps
b9f6bc187ae3
·Nicolas Richart on Jan 17 2022, 17:31.
Merge branch 'master' into bugfixes/flatten-internal-that-are-missing
32ba7f54c6bb
·branch: bugfixes/flatten-internal-that-are-missing
·Nicolas Richart on Jan 17 2022, 09:46.

Jan 15 2022

Merge branch 'bugfixes/docker-image' into 'master'
fbdc2ac1ae19
·tag: v4.0.1-pre1
·richart on Jan 15 2022, 21:05.
Changed debian:testing to debian:bullseye and corrected coverage
96aea35d9bf2
·Nicolas Richart on Jan 15 2022, 14:25.
Merge branch 'bugfixes/cmake_regex_error' into 'master'
9c40e0686a82
·richart on Jan 15 2022, 13:29.

Jan 14 2022

Merge branch 'master' into bugfixes/cmake_regex_error
faa3ae1123b2
·branch: bugfixes/cmake_regex_error
·anciaux on Jan 14 2022, 17:29.
Merge branch 'bugfixes/36-pretty-print-of-akantu-array' into 'master'
cb44d0f7690c
·tdroch on Jan 14 2022, 15:15.
change apt-get to apt hoping to have the key problem fixed
e8261daf649e
·anciaux on Jan 14 2022, 14:43.

Jan 13 2022

Some cmake version complains about an illegal character
b58c882ac2a1
·anciaux on Jan 13 2022, 13:45.

Jan 12 2022

Debugging warning linter
2610f04da5bc
·branch: bugfixes/36-pretty-print-of-akantu-array
·Nicolas Richart on Jan 12 2022, 10:35.

Jan 11 2022

Updating pterry printers and adding missing regexp for Arrays
1bf1286f15f4
·Nicolas Richart on Jan 11 2022, 18:46.

Dec 23 2021

Merge branch 'features/moving-pypi-package-in-main-akantu' into 'master'
dc73cc98c872
·richart on Dec 23 2021, 11:40.
This makes the CI build the python wheel - on master it pushes the wheel to the…
4d4db01864a7
·richart on Dec 23 2021, 11:40.

Dec 17 2021

Removing early out of a loop that can cause an flatten internal to not be…
849f02d8326e
·Nicolas Richart on Dec 17 2021, 10:28.

Nov 26 2021

Bug fix
7ff89e9b9c50
·richart on Nov 26 2021, 14:11.

Nov 23 2021

Merge branch 'features/terms-to-add-in-python' into 'master'
1c72ce33b004
·branch: bugfixes/32-python-interface-import-akantu-fails-with-4-0-0-problem-in-make-install
·tdroch on Nov 23 2021, 14:28.
Adding missing interface for periodic information
16af306e34b6
·richart on Nov 23 2021, 14:09.

Nov 10 2021

Bug fix in the interface
6503defbf56c
·branch: features/terms-to-add-in-python
·Nicolas Richart on Nov 10 2021, 18:29.

Nov 9 2021

Remove pure virtual where not needed
90b20d4c42ee
·Nicolas Richart on Nov 9 2021, 19:21.

Nov 5 2021

Adding missing consts
9fe7ea111967
·richart on Nov 5 2021, 18:10.
Adding a layer InterceptSolverCallback to simplify the interception
174a2e1ab3ac
·richart on Nov 5 2021, 15:04.
Moved dofs ids information to TermsToAssemble
3ad087540b2b
·richart on Nov 5 2021, 11:23.

Oct 22 2021

Merge branch 'features/28-getelementinradius-const-element-element-in-feengine…
adf760250693
·richart on Oct 22 2021, 16:56.
Example of solver_callback usage
6a555e268fa8
·Nicolas Richart on Oct 22 2021, 09:15.
Adding missing parts in the interface and debugging
44aa27ae672e
·Nicolas Richart on Oct 22 2021, 09:08.

Oct 21 2021

Merge branch 'features/python-doc' into 'master'
260e9988d3c2
·richart on Oct 21 2021, 13:16.
Merge branch 'master' of gitlab.com:akantu/akantu into features/python-doc
d5c9b97925e8
·branch: features/python-doc
·tdroch on Oct 21 2021, 08:58.
Merge remote-tracking branch 'origin/master' into features/terms-to-add-in…
ff3af874c77d
·Nicolas Richart on Oct 21 2021, 08:24.
Merge branch 'bugfixes/coverage-not-run-properly-anymore' into 'master'
4495c438977d
·richart on Oct 21 2021, 08:22.
Correction of the coverage reporting
3cf041b128f7
·richart on Oct 21 2021, 08:22.

Oct 20 2021

Merge branch 'master' of gitlab.com:akantu/akantu into features/python-doc
bf256d3a02cd
·tdroch on Oct 20 2021, 16:39.
remove dependencies from python doc
4150bff40824
·tdroch on Oct 20 2021, 16:24.
Adding TermsToAdd and SolverCallbacks to python interface
1cf5685c9724
·richart on Oct 20 2021, 10:53.

Oct 11 2021

Merge branch 'features/changelog' into 'master'
9b728e0b714b
·tdroch on Oct 11 2021, 10:34.

Oct 9 2021

Adding a changelog
444bd1903ad5
·branch: features/changelog
·richart on Oct 9 2021, 09:40.

Oct 6 2021

Merge branch 'bugfixes/broken_dumper_nodes' into 'master'
dae6329da495
·richart on Oct 6 2021, 16:03.
bug fix for the dumper field: now possible again to dump a mesh
6c4aec2225d4
·branch: bugfixes/broken_dumper_nodes
·anciaux on Oct 6 2021, 14:29.

Oct 1 2021

Debuged getElementInradius and added a test
cf25e59e090b
·branch: features/28-getelementinradius-const-element-element-in-feengine-returns-always-0
·richart on Oct 1 2021, 16:08.

Sep 21 2021

Merge branch 'features/another-take-at-ci-stuffs' into 'master'
5632dcaaf3f8
·anciaux on Sep 21 2021, 14:41.
Merge branch 'bugfixes/27-bug-in-the-python-interface' into 'master'
6c2f4744d6e8
·tdroch on Sep 21 2021, 10:49.

Sep 17 2021

Linting the cc files too
d213b95f146f
·branch: features/another-take-at-ci-stuffs
·Nicolas Richart on Sep 17 2021, 10:45.

Sep 16 2021

Some more errors introduced/revealed by the linter
be9997e57239
·richart on Sep 16 2021, 18:20.

Historyfeatures/changes-to…8185a160038c6d185b98a0b…

Apr 28 2022

Apr 27 2022

Apr 26 2022

Apr 8 2022

Mar 30 2022

Mar 20 2022

Mar 18 2022

Mar 15 2022

Feb 18 2022

Feb 10 2022

Feb 3 2022

Feb 2 2022

Jan 21 2022

Jan 20 2022

Jan 19 2022

Jan 17 2022

Jan 15 2022

Jan 14 2022

Jan 13 2022

Jan 12 2022

Jan 11 2022

Dec 23 2021

Dec 17 2021

Nov 26 2021

Nov 23 2021

Nov 10 2021

Nov 9 2021

Nov 5 2021

Oct 22 2021

Oct 21 2021

Oct 20 2021

Oct 11 2021

Oct 9 2021

Oct 6 2021

Oct 1 2021

Sep 21 2021

Sep 17 2021

Sep 16 2021

History
features/changes-to…8185a160038c6d185b98a0b…