Diffusion akantu (features/changes-to-address-joss-review) History

History
features/changes-to…f2a8abd6b84956e4c4fa6f3…

Jun 16 2019

Bug fixed again after merge
f2a8abd6b849
·richart on Jun 16 2019, 23:27.
Bug fix on static patch tests
870eeccd5cd4
·richart on Jun 16 2019, 21:23.
Small leak fix
f255dcc453be
·richart on Jun 16 2019, 20:15.
Bug fix in non linear tests
1f6e9e513dbb
·richart on Jun 16 2019, 20:10.
Bug fix in the python patch tests
4bf5f548d40e
·richart on Jun 16 2019, 20:10.
Modified gitignore
473a2fed5387
·richart on Jun 16 2019, 16:15.
Bug fix in Dumper shared_ptr changes
d56d4c73db45
·richart on Jun 16 2019, 16:15.
Bug fixing in the python interface
7bf5844d231d
·richart on Jun 16 2019, 14:52.
Merge branch 'features/pybind11' of c4science:/diffusion/AKAPRIV/akantu-private…
7211363d92dc
·richart on Jun 16 2019, 12:50.

Jun 15 2019

Merge branch 'master' into features/pybind11
604abe561a78
·richart on Jun 15 2019, 18:24.

Jun 14 2019

remove a warning
d8dd5f613d84
·anciaux on Jun 14 2019, 15:28.
added the possibility to build dumper::Field in python
2249f672325a
·anciaux on Jun 14 2019, 15:28.
Remove the raw pointers on dumper::Fields
5679bae8c1dc
·anciaux on Jun 14 2019, 15:27.

Jun 13 2019

Bug fix in the createElementGroups function
1d9772fd8e9c
·richart on Jun 13 2019, 00:20.
Version change
39deb14038fd
·richart on Jun 13 2019, 00:19.

Jun 12 2019

Fixing bugs in parallel:
0c6888ff380d
·richart on Jun 12 2019, 18:29.
Make it compatible with the new versions of google-test
c4f2158a9313
·richart on Jun 12 2019, 18:29.
Compiling with clang with -fsanitize=memory
f433098ce4ca
·richart on Jun 12 2019, 18:28.

Jun 5 2019

Bug fix in cohesive elements
ece172541773
·richart on Jun 5 2019, 19:39.
Repairing some swig things
d615f3390f78
·richart on Jun 5 2019, 19:38.
Merge branch 'master' into features/petsc
00ca1e91f39a
·richart on Jun 5 2019, 17:47.
Minor bug fixes
e31046f5809d
·richart on Jun 5 2019, 14:16.

Jun 4 2019

Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
dd534854983b
·richart on Jun 4 2019, 16:05.

Jun 2 2019

Bug fix in the MSH reader version 4
02f245d81e99
·richart on Jun 2 2019, 20:49.

May 31 2019

Merge branch 'master' of c4science.ch:/diffusion/AKAPRIV/akantu-private
c9e67b83dadf
·richart on May 31 2019, 21:19.
correct the construction of the element filter with ek_regular
ce7807ee8dd8
·anciaux / richart on May 31 2019, 17:37.
Correction of the default element types within element_type_map:
45ceddff1be6
·gallyamov / richart on May 31 2019, 17:37.
Few modifications
6d5d7eb67dcf
·richart on May 31 2019, 17:33.

May 29 2019

Update on mesh_io_msh read and write
b747d8056676
·richart on May 29 2019, 15:22.

May 21 2019

Update for latest findcgal.cmake
fba28721befa
·richart on May 21 2019, 19:50.
Modified MSH reader for version 4.1 of the files
7e48d8081c03
·richart on May 21 2019, 19:50.

May 14 2019

renaming a file
1eeb3a40716a
·anciaux on May 14 2019, 14:48.
adding a full example with eigen mode treatments
0b242b8d30e9
·anciaux on May 14 2019, 14:48.
adding a few methods for solidmechanics model
f80acecf97a9
·anciaux on May 14 2019, 12:34.
Reactivating anisotropic patch tests
7a4f63ed245b
·richart on May 14 2019, 11:39.
Bug fix in material anisotropic
4929f9340ec6
·richart on May 14 2019, 11:20.

May 10 2019

heat transfer patch test working
d3b1deda3441
·anciaux on May 10 2019, 10:44.

May 9 2019

on my way to fix heattransfer tests
c60d10efd8a2
·anciaux on May 9 2019, 16:40.
remove swig completely
61c6314e2e2c
·anciaux on May 9 2019, 16:40.
removing python files useless now thanks to pybind
7fe63708dd78
·anciaux on May 9 2019, 16:39.
adding the heat transfert interface
76529bcddfd3
·anciaux on May 9 2019, 16:39.
revert the BC namespace
0781d52fe548
·anciaux on May 9 2019, 15:22.
sparse matrix example working in pybind
42e787f146b2
·anciaux on May 9 2019, 14:55.
towards sparsematrix
78bf3a3329f0
·anciaux on May 9 2019, 14:20.
towards sparsematrix
e8ea53792fcf
·anciaux on May 9 2019, 14:20.
change path and last example
95bedb30177e
·anciaux on May 9 2019, 13:44.
change a path
09132a7235f3
·anciaux on May 9 2019, 13:26.
change a path
89806eb3fc70
·anciaux on May 9 2019, 13:17.
removing swig
c4e9e7754ea5
·anciaux on May 9 2019, 13:15.
tests run with pytest-3: need cmake expert to make it clean
e1e12ee01d80
·anciaux on May 9 2019, 12:55.
complement the python interface
c54a4f4fa6d8
·anciaux on May 9 2019, 12:17.
adding a test for meshes
17c5a4b36d23
·anciaux on May 9 2019, 12:15.
adapt the test for pytest and pybind
a774861fccbe
·anciaux on May 9 2019, 12:15.
update the patch tests for pybind and pytest
fda9fcf18aa3
·anciaux on May 9 2019, 11:53.

May 8 2019

bc test in pytest
b68cd632df17
·anciaux on May 8 2019, 16:31.
change getForce to getExternalForce in a test
b771333c08b9
·anciaux on May 8 2019, 16:25.
bind node/element groups
52084c9fb8e1
·anciaux on May 8 2019, 16:25.
correct the construction of the element filter with ek_regular
190abbca14dd
·anciaux on May 8 2019, 15:41.
Correction of the default element types within element_type_map:
2030e8779a0d
·gallyamov / anciaux on May 8 2019, 15:14.
clang formating
28cb4e0ace4b
·anciaux on May 8 2019, 15:13.
remove Dirichlet namespace in test
499684f3ef33
·anciaux on May 8 2019, 15:13.
remove nonexisting call in the pybind interface
18fb3fce3807
·anciaux on May 8 2019, 15:12.
remove call to mother material computepotential doing nothing
90024f20a859
·anciaux on May 8 2019, 15:11.
Force format 2 for generated msh files with CMake scripts
1acf4842a075
·anciaux on May 8 2019, 15:08.
Merge branch 'master' into features/pybind11
b714ad9efc75
·anciaux on May 8 2019, 13:11.
adding element group and prepare pytest
d351f96065bd
·anciaux on May 8 2019, 13:07.
adding a mpi example
782d3a0b8cbc
·anciaux on May 8 2019, 10:00.

May 7 2019

cohesive example in pybind working: still to test
5f92a281328d
·anciaux on May 7 2019, 18:00.
finish binding of cohesive models
a422a7b13ebc
·anciaux on May 7 2019, 17:59.
revert my stupid change
191162f7494f
·anciaux on May 7 2019, 17:59.
remove the Dirichlet and Neumann namespaces
fa5ca3a39d7c
·anciaux on May 7 2019, 17:45.
remove the ghost type in energy based things
731ab906ec2c
·anciaux on May 7 2019, 17:44.
improved error message
58ea3366c6c2
·anciaux on May 7 2019, 17:43.
binding the solidmechanicsmodelcohesive
abd941928906
·anciaux on May 7 2019, 17:42.
adding the python example with cohesive elements
41ab328b73ee
·anciaux on May 7 2019, 17:41.

May 6 2019

correct the problem of material thermal not having an implementation of…
4eb2305b7bca
·anciaux on May 6 2019, 17:41.
all python examples working in sequential
fb74eb1aa9cb
·anciaux on May 6 2019, 17:39.
working materials
9833fc65b35d
·anciaux on May 6 2019, 17:39.

May 3 2019

working bi-material example with custom material in pybind
e9f7ee81b60b
·anciaux on May 3 2019, 17:40.
splitting files for the parser
e1acec406fab
·anciaux on May 3 2019, 14:40.
splitting the files
80ee059dcd99
·anciaux on May 3 2019, 14:23.
splitting the files
d72711df8b98
·anciaux on May 3 2019, 14:22.
splitting the files
970f04df772b
·anciaux on May 3 2019, 14:22.
cleaning the materials energy computation ghost prototypes
9e802c334728
·anciaux on May 3 2019, 12:27.
cleaning the materials energy computation ghost prototypes
80bf494bde0b
·anciaux on May 3 2019, 12:25.
fix bi-material example for pybind
5afcb7f4f455
·anciaux on May 3 2019, 10:00.

May 2 2019

correct the initialization problem with materials
65765c982174
·anciaux on May 2 2019, 17:19.

Apr 23 2019

Correction in transform iterators
66eceb67748c
·richart on Apr 23 2019, 16:47.
Adding dof manager tests for petsc
2b0ae7185dfd
·richart on Apr 23 2019, 16:47.

Apr 16 2019

still working on the materials for python
077e6bd1fe54
·anciaux on Apr 16 2019, 16:08.

Apr 12 2019

started the dev of the materials in python
d080b4d9c04b
·anciaux on Apr 12 2019, 17:39.
tests good for array, vector and matrix
30760ecd56c3
·anciaux on Apr 12 2019, 17:07.
adding test and dynamic example now working
171761bb304c
·anciaux on Apr 12 2019, 12:34.

Apr 9 2019

fix a compilation problem due to file removal
08d3806af858
·anciaux on Apr 9 2019, 13:45.
remove the useless namespaces Dirichlet and Neumann
70056ac38e32
·anciaux on Apr 9 2019, 13:42.
good first state for pybind
060a9a2f14c7
·anciaux on Apr 9 2019, 13:41.
good to go with pybind11
a3ab6bb303d3
·anciaux on Apr 9 2019, 13:40.
added solidmechanics bcs mesh model
35c9ed6aaf3f
·anciaux on Apr 9 2019, 11:38.

Apr 8 2019

fix bad merge
6fb1449a0ae8
·anciaux on Apr 8 2019, 13:13.
Abaqus reader broken with Boost 1.67 (wont fix)
bcb1162702d9
·richart / anciaux on Apr 8 2019, 12:43.

Historyfeatures/changes-to…f2a8abd6b84956e4c4fa6f3…

Jun 16 2019

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May 31 2019

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Apr 16 2019

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Apr 8 2019

History
features/changes-to…f2a8abd6b84956e4c4fa6f3…