refactor:plotSCase.m: Update the way of getting config file data.

refactor:plotSCase.m: Adapt the plotSCase.m function to the new ShoulderCase.

refactor:ShoulderCase.m:plot: Change the ShoulderCase.plot method to call the…

refactor:Shoulder.m:plot: Move the plot method from the ShoulderCase object to…

feat: Add the MethodsMonitor abstract class that monitor and programm child…

feat: Add a function that substract the elements of cell array from another…

feat: Add a format.string constant property to Timer object.

Merge branch 'boubat'

fix: Adapt SCaseIDParser to new version of FileExtractor

perf: Assert validity of inputs and output of FileExtractor

perf: Change the output of FileExtractor object to directly return the variable…

fix: Orient the glenoid.centerLine toward ML

fix: Change the use of exist() for dir()

fix: Reduce the required number of groove points in scapula CoordinateSystem

doc: Update the description of measureSCase arguments and its examples

fix: Re-create the glenoid.walch property and change the auto-measurements…

fix: Comment out outdated reference to glenoid.walch

fix: Change reference to glenoid.SCase in glenoid.calcDensity

fix: Change the reference to glenoid.SCase for glenoid.scapula.shoulder.SCase…

perf: Add more try/catch in measurements of measureSCase and log the error…

fix: Change the access of the contructor of Glenoid

fix: Add a missing 'end' statement in GlenoidManual

refactor: Change the way the other objects handle the new GlenoidAuto/Manual…

fix: Correct typo

refactor: Extract one abstract and two manual/auto object out of the Glenoid…

fix: Add try/catch in measureSCase measurements to prevent measureSCase from…

refactor: Change openConfigFile function for ConfigFileExtractor.getVariable…

feat: Add the current folder and subfolders in MATLAB path at the beginning of…

fix: Change python path dependencies to be chosen in config file for muscles.

doc: Update measurSCase header to describe the new arguments handling

refactor: Delete the output of glenoid.measureVersionAndInclination

refactor: Delete CT2Scapula method, outdated by the CoordinateSystem.express…

fix: Avoid SCase creation error in measureSCase.m

refactor: Implement the glenoid.morphology method to call the dedicated…

refactor: Extract a glenoid method to measure its center line

fix: Change methods' names to fit their files' names

refactor: Extract a method to measure glenoid version and inclination values

refactor: Change two glenoid methods' names that gave useless informations

feat: Add a method to measure the glenoid antero-superior angle with PCA

refactor: Extract a method from glenoid.morphology that expresses the glenoid…

feat: Add a function to project vectors on a vector

feat: Add methods to project points on the three planes spaned by a…

refactor: Extract methods to set glenoid width and height with PCA

refactor: Change variable name in glenoid.measureCenter.m

refactor: Extract method to measure glenoid depth

refactor: Extrcat

refactor: Split measureSCase into three part

refactor: Same as previous commit

refactor: Change measureSCase to handle the new ShoulderCase properties

refactor: Change the references to SCase for references to the direct parent…

refactor: Split the shoulder property into two new shoulderManual and…

refactor: Change the implementation of getDataRootPath to use the FileExtractor…

refactor: Split Scapula class into one abstract and two concrete classes

feat: Add classes to get text from files

refactor: Specify method's scope in method's name

refactor: Give properties their values with config file instead of hard code

refactor: Split Shoulder class into one abstract and two concrete classes

feat: Add a method to load a ShoulderCase

refactor: Change methods name containing 'SCase' with 'Case'

refactor: Change names of classes

refactor: Remove the future poltergeist class SCaseDB

feat: Add a Logger class to handle log files

refactor: Remove the obsolete TimerData class

feat: Add a class that implements linked lists

refactor: Change the global property type from containers.Map to LinkedList and…

feat: Add a function that asserts that a text matches an expression

feat: Add a function that returns the current operating system's path separator

feat: Add an object that measures multiple elapsed times

feat: Add a class that validates shoulder cases ID

feat: Add an object to search shoulder cases in a directory tree

feat: Add objects that map shoulder cases paths to shoulder cases ID

fix: Make the CoordinateSystem.isOrthogonal method independent from axes' norms

docs: Add details in a method description

fix: Change the descritpion of arguments in docstring

refactor: Extract methods from coordSysSet. The main part is given to the new…

perf: Complete the methods to set a coordinate system

feat: Add a function to find the longest vector among a given array of vectors

feat: Add the new Plane class that can create and use 3D planes

feat: Add a function to choose the direction of a vector toward another one

feat: Add the glenoid surface mean point in a sub-property

refactor: Delete the deprecated Ellipsoid class and related methods

feat: Add a method for measuring glenoid width and height

feat: Add a class for coordinate systems

Merge branch 'master' into boubat

feat: Add the Ellipsoid object for the glenoid fitted ellipsoid

feat: Add a method to express points in local coordinate system

feat: Add a method for measuring glenoid radius thanks to a fitted sphere

fix: Move the Sphere class to ShoulderCase/

feat: Extract a method used for measuring glenoid center

feat: Add the Sphere object for the glenoid fitted sphere

refactor: Extract glenoid center measurement methods out from glenoid…

feat&fix: Add excel data to SCase. Fix condition in argument handling.

perf: Clean listSCase method

feat: Add a pool object property

feat: Add listSCase method

Merge branch 'master' of https://c4science.

creation of the SCaseDB class

patch

reorganize measureSCase loops and extend the 'auto' loop

dicominfopath now correctly chosen pointing to the dicom file in the middle of…