All our Documented Software is in the below hierearchy == Software Installed on BIOP PCs == | Software | Link | ---------- | ---- | | Arivis | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Arivis Vision4D` | BIOP User Tracker | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\BIOP User Tracker\Current` | CellProfiler | https://cellprofiler.org/releases and https://cellprofileranalyst.org/releases | Fiji | https://fiji.sc/ | Handbrake | https://handbrake.fr/downloads.php | Harmony | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Harmony` | Imaris | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Imaris` | LAS X | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Leica LAS` | Matlab | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Matlab` | Miniconda | https://docs.conda.io/en/latest/miniconda.html **Get Python3 x64** | Putty | https://www.chiark.greenend.org.uk/~sgtatham/putty/latest.html | QuPath | https://qupath.github.io/ | R Studio | https://rstudio.com/products/rstudio/download/ and https://stat.ethz.ch/CRAN/ | ZEN | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Zeiss ZEN`

All our Documented Software is in the below hierarchy. == Software Installed on BIOP PCs == | Software | Link | ---------- | ---- | | Arivis | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Arivis Vision4D` | BIOP User Tracker | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\BIOP User Tracker\Current` | CellProfiler | https://cellprofiler.org/releases and https://cellprofileranalyst.org/releases | Fiji | https://fiji.sc/ | Handbrake | https://handbrake.fr/downloads.php | Harmony | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Harmony` | Imaris | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Imaris` | LAS X | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Leica LAS` | Matlab | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Matlab` | Miniconda | https://docs.conda.io/en/latest/miniconda.html **Get Python3 x64** | Putty | https://www.chiark.greenend.org.uk/~sgtatham/putty/latest.html | QuPath | https://qupath.github.io/ | R Studio | https://rstudio.com/products/rstudio/download/ and https://stat.ethz.ch/CRAN/ | ZEN | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Zeiss ZEN` For Fiji and QuPath, you can use the install script in the following repo: https://github.com/BIOP/biop-bash-scripts

All our Documented Software is in the below hierearchy. == Software Installed on BIOP PCs == | Software | Link | ---------- | ---- | | Arivis | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Arivis Vision4D` | BIOP User Tracker | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\BIOP User Tracker\Current` | CellProfiler | https://cellprofiler.org/releases and https://cellprofileranalyst.org/releases | Fiji | https://fiji.sc/ | Handbrake | https://handbrake.fr/downloads.php | Harmony | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Harmony` | Imaris | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Imaris` | LAS X | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Leica LAS` | Matlab | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Matlab` | Miniconda | https://docs.conda.io/en/latest/miniconda.html **Get Python3 x64** | Putty | https://www.chiark.greenend.org.uk/~sgtatham/putty/latest.html | QuPath | https://qupath.github.io/ | R Studio | https://rstudio.com/products/rstudio/download/ and https://stat.ethz.ch/CRAN/ | ZEN | `\\svfas6.epfl.ch\biop\biop\Informatics\Software Library\Zeiss ZEN` For Fiji and QuPath, you can use the install script in the following repo: https://github.com/BIOP/biop-bash-scripts