Phriction Projects Wikis Bioimaging And Optics Platform Teaching III-Graphs & Statistics History Version 5 vs 12
Version 5 vs 12
Version 5 vs 12
Edits
Edits
- Edit by oburri, Version 12
- Jul 9 2020 09:54
- Edit by romainGuiet, Version 5
- Aug 23 2017 09:31
Edit Older Version 5... | Edit Current Version 12... |
Content Changes
Content Changes
= BIOP Recommandations=
Do not plot mean of ( mean of ( mean of (mean of a measure) ) ) )
SHOW your work! Show dot plots!
==Anscombe's quartet, a.k.a "what's behind the mean" ==
{F3437610, size=full}
The 4 datasets have the same :
- Mean : 7.5
- Standart Deviation : 4.12
- Regression line : y = 3 + 0.5x
- correlation : 0.816
[[ http://www.sjsu.edu/faculty/gerstman/StatPrimer/anscombe1973.pdf | Graphs in Statistical Analysis ]]
F. J. Anscombe , The American Statistician, Vol. 27, No. 1. (Feb., 1973), pp. 17-21.
== Data representation ==
{F3437560, size=full}
[[ http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1002128 | Beyond Bar and Line Graphs: Time for a New Data Presentation Paradigm. ]]
Weissgerber , Milic, Winham, Garovic. PLOS, Published: April 2015
== Chart Suggestions ==
{F3437530 , size=full}
[[ http://extremepresentation.typepad.com/blog/2006/09/choosing_a_good.html | Source ]]
== Example ==
Different Field of view of a sample //(clic on the image if not animated)//
{F3470150}
Corresponding measurement// (clic on the image if not animated)//
{F3470299}
All measurements plotted together
{F3470184}
This is how you result would look like if you plot mean of each fields
{F3470458}
= BIOP Recommandations=
Do not plot mean of ( mean of ( mean of (mean of a measure) ) ) )
SHOW your work! Show dot plots!
==Anscombe's quartet, a.k.a "what's behind the mean" ==
{F3437610, size=full}
The 4 datasets have the same :
- Mean : 7.5
- Standart Deviation : 4.12
- Regression line : y = 3 + 0.5x
- correlation : 0.816
[[ http://www.sjsu.edu/faculty/gerstman/StatPrimer/anscombe1973.pdf | Graphs in Statistical Analysis ]]
F. J. Anscombe , The American Statistician, Vol. 27, No. 1. (Feb., 1973), pp. 17-21.
== Data representation ==
{F3437560, size=full}
[[ http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1002128 | Beyond Bar and Line Graphs: Time for a New Data Presentation Paradigm. ]]
Weissgerber , Milic, Winham, Garovic. PLOS, Published: April 2015
== Superplots ==
{F14253027, layout=center, width=700}
Samuel J. Lord, Katrina B. Velle, R. Dyche Mullins, Lillian K. Fritz-Laylin; SuperPlots: Communicating reproducibility and variability in cell biology. J Cell Biol 1 June 2020; 219 (6): e202001064. doi: https://doi.org/10.1083/jcb.202001064
https://doi.org/10.1083/jcb.202001064
== Chart Suggestions ==
{F3437530 , size=full}
[[ http://extremepresentation.typepad.com/blog/2006/09/choosing_a_good.html | Source ]]
== Example ==
Different Field of view of a sample //(clic on the image if not animated)//
{F3470150}
Corresponding measurement// (clic on the image if not animated)//
{F3470299}
All measurements plotted together
{F3470184}
This is how you result would look like if you plot mean of each fields
{F3470458}
== It's not only US ==
{F10360133}
and [[ https://rupress.org/jcb/article/219/6/e202001064/151717/SuperPlots-Communicating-reproducibility-and?searchresult=1| Lord et al, 2020 ]]
== Using the Student’s t-test with extremely small sample sizes ==
[[ https://pareonline.net/getvn.asp?v=18&n=10 | article ]]
{F10789287}
= BIOP Recommandations=
Do not plot mean of ( mean of ( mean of (mean of a measure) ) ) )
SHOW your work! Show dot plots!
==Anscombe's quartet, a.k.a "what's behind the mean" ==
{F3437610, size=full}
The 4 datasets have the same :
- Mean : 7.5
- Standart Deviation : 4.12
- Regression line : y = 3 + 0.5x
- correlation : 0.816
[[ http://www.sjsu.edu/faculty/gerstman/StatPrimer/anscombe1973.pdf | Graphs in Statistical Analysis ]]
F. J. Anscombe , The American Statistician, Vol. 27, No. 1. (Feb., 1973), pp. 17-21.
== Data representation ==
{F3437560, size=full}
[[ http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1002128 | Beyond Bar and Line Graphs: Time for a New Data Presentation Paradigm. ]]
Weissgerber , Milic, Winham, Garovic. PLOS, Published: April 2015
== Superplots ==
{F14253027, layout=center, width=700}
Samuel J. Lord, Katrina B. Velle, R. Dyche Mullins, Lillian K. Fritz-Laylin; SuperPlots: Communicating reproducibility and variability in cell biology. J Cell Biol 1 June 2020; 219 (6): e202001064. doi: https://doi.org/10.1083/jcb.202001064
https://doi.org/10.1083/jcb.202001064
== Chart Suggestions ==
{F3437530 , size=full}
[[ http://extremepresentation.typepad.com/blog/2006/09/choosing_a_good.html | Source ]]
== Example ==
Different Field of view of a sample //(clic on the image if not animated)//
{F3470150}
Corresponding measurement// (clic on the image if not animated)//
{F3470299}
All measurements plotted together
{F3470184}
This is how you result would look like if you plot mean of each fields
{F3470458}
== It's not only US ==
{F10360133}
and [[ https://rupress.org/jcb/article/219/6/e202001064/151717/SuperPlots-Communicating-reproducibility-and?searchresult=1| Lord et al, 2020 ]]
== Using the Student’s t-test with extremely small sample sizes ==
[[ https://pareonline.net/getvn.asp?v=18&n=10 | article ]]
{F10789287}
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