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Merge branch 'lammps-icms' of https://github.com/lammps/lammps into add-user…

Authored by Stefan Paquay <stefanpaquay@gmail.com> on Mar 3 2016, 17:36.

Description

Merge branch 'lammps-icms' of https://github.com/lammps/lammps into add-user-manifold

Event Timeline

Stefan Paquay <stefanpaquay@gmail.com> committed rLAMMPS0d630f16753f: Merge branch 'lammps-icms' of https://github.com/lammps/lammps into add-user… (authored by Stefan Paquay <stefanpaquay@gmail.com>).Mar 3 2016, 17:36

Merged Changes

This commit merges a very large number of changes. Only the first 50 are shown.
CommitAuthorDetailsCommitted
943cc0ac196cAxel Kohlmeyer
update Eigen template library to version 3.2.8 
Mar 2 2016
bc900935fdafAxel Kohlmeyer
Merge branch 'merge-pull-33' into lammps-icms 
Mar 2 2016
ffd213d9fd8dAxel Kohlmeyer
Merge branch 'master' of https://github.com/crtrott/lammps into merge-pull-33 
Mar 2 2016
375c1cc72144Axel Kohlmeyer
remove stray "same" from morse pair style docs 
Mar 2 2016
6e327ee1b361Axel Kohlmeyer
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms 
Mar 2 2016
569736630afccrtrott
Revert changes in benchmark examples 
Mar 2 2016
9807c6fb5a4bcrtrott
Kokkos: fix missing namespace start in LJ2 class2 pair styles 
Mar 2 2016
ca39c079865ecrtrott
Kokkos: fix verlet_kokkos if no pair style is used 
Mar 2 2016
b01892757ad1crtrott
Merge remote-tracking branch 'main/master' 
Mar 1 2016
5931b2f7cdf8crtrott
Kokkos: remove print statement 
Mar 1 2016
35c29a061041crtrott
Kokkos: make lammps instantiate a kokkos atom_vec style if kokkos on 
Mar 1 2016
29de3e2403becrtrott
Kokkos: improper_harmonic: make reallocation check size first 
Mar 1 2016
e3fa5bfd4f87crtrott
KOKKOS: fixing an issue in atom_vect styles with missing modify statements 
Mar 1 2016
5ee04e33b1d5Axel Kohlmeyer
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms 
Mar 1 2016
ceb9f09e29d3crtrott
Kokkos: fix some bonded interactions to work with /kk/host 
Mar 1 2016
f37a13e6b0f9Axel Kohlmeyer
need to manually touch neighbor.cpp for packages providing custom neighbor… 
Feb 29 2016
dd11c888af34Axel Kohlmeyer
remove redundant entry 
Feb 29 2016
d6cfa07d3a96Axel Kohlmeyer
update .gitignore for new packages and styles 
Feb 28 2016
0568dd760f40Axel Kohlmeyer
update machine g++ for new dependency generation 
Feb 28 2016
9f8d3e998851Axel Kohlmeyer
properly support mode SUMSQ and AVESQ in compute reduce/region 
Feb 28 2016
794cc332ac4aAxel Kohlmeyer
correct bug in compute reduce/region reported by "maksim" on lammps-users 
Feb 28 2016
28c510d67beaAxel Kohlmeyer
some more colvars updates to silence compiler warnings 
Feb 28 2016
ebd41bc07fc2Axel Kohlmeyer
merge colvars updates as of feb 28th 
Feb 28 2016
573256ad60deAxel Kohlmeyer
Merge branch 'lammps-icms' of bitbucket.org:akohlmey/lammps-icms into lammps… 
Feb 28 2016
a1dc8e8a0c1dAxel Kohlmeyer
Merge branch 'lammps-icms' of bitbucket.org:akohlmey/lammps-icms into lammps… 
Feb 28 2016
56517813968dAxel Kohlmeyer
convert machines "mpi" and "serial" to new dependency handling 
Feb 28 2016
cb3d9a80d885Axel Kohlmeyer
always delete and recreate .depend from master makefile. 
Feb 28 2016
33a3c821d123Axel Kohlmeyer
Integrated pair_style morse/smooth/linear from stefan paquay in USER-MISC 
Feb 28 2016
53bf9f7da8deStefan Paquay/Axel Kohlmeyer
Added equation and description for pair_style morse/smooth/linear 
Feb 28 2016
c22d699f742dStefan Paquay/Axel Kohlmeyer
Added a linearly smoothed variant for the Morse potential. 
Feb 28 2016
16431222dab3Axel Kohlmeyer
alternate approach. not yet 100% working. 
Feb 27 2016
43fdef3c32edAxel Kohlmeyer
safer trigger of dependency updates 
Feb 27 2016
73037235b4deAxel Kohlmeyer
use mkdep.exe for faster and cleaner dependency handling 
Feb 27 2016
41d65eedf498Axel Kohlmeyer
adapt mkdep.c for building LAMMPS 
Feb 27 2016
cffdf5b3ae4cAxel Kohlmeyer
remove incorrect include flag statement 
Feb 27 2016
ee999707937cAxel Kohlmeyer
import mkdep.c from the linux 2.4 kernel source 
Feb 27 2016
7b2414abfb09Axel Kohlmeyer
Merge remote branch 'lammps-ro/master' into lammps-icms 
Feb 27 2016
216f543e2e7ccrtrott
Kokkos: reenable support for all neighbor styles 
Feb 26 2016
4b755fb93b07crtrott
Kokkos: support overlapping host device calculation commit 9 
Feb 26 2016
ba6abbd9d3fccrtrott
Kokkos: support overlapping host device calculation commit 8 
Feb 26 2016
35dbc63af200crtrott
Kokkos: support overlapping host device calculation commit 7 
Feb 26 2016
c20d2dccdb0bAxel Kohlmeyer
update lammps.book for newly added files 
Feb 26 2016
2702d94cfd5eAxel Kohlmeyer
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms 
Feb 26 2016
9df1b66d1e14crtrott
Kokkos: support overlapping host device calculation commit 6 
Feb 25 2016
8aecc2baed13crtrott
Kokkos: support overlapping host device calculation commit 5 
Feb 25 2016
a9452c807f85crtrott
Kokkos: support overlapping host device calculation commit 4 
Feb 25 2016
f3716023e16acrtrott
Kokkos: support overlapping host device calculation commit 3 
Feb 25 2016
2b2c4755c84ecrtrott
Kokkos: support overlapping host device calculation commit 1 
Feb 25 2016
46be84ff1fa5crtrott
Kokkos: support overlapping host device calculation commit 1 
Feb 25 2016
2aebaf5d45e7crtrott
KOKKOS: fixing clang compiler issues 
Feb 25 2016

Very Large Commit

This commit is very large, and affects more than 1000 files. Changes are not shown.