Diffusion lammps (master) History

src
masterdb1e17197fcfc1b5dc4c472…

Sep 15 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
db1e17197fcf
·Axel Kohlmeyer on Sep 15 2016, 13:25.

Sep 14 2016

sync with Git
0f6d21acda7b
·sjplimp on Sep 14 2016, 17:27.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
3b4412d782ef
·Axel Kohlmeyer on Sep 14 2016, 15:39.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15573 f3b2605a-c512-4ea7…
206f4e18a64e
·sjplimp on Sep 14 2016, 01:06.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15571 f3b2605a-c512-4ea7…
9d0e85392555
·sjplimp on Sep 14 2016, 00:58.

Sep 13 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15568 f3b2605a-c512-4ea7…
342421babb28
·sjplimp on Sep 13 2016, 22:43.

Sep 12 2016

Only check for comm_modify vel yes if need be
7d70a5982721
·Efrem Braun on Sep 12 2016, 14:22.
Made error message if not comm_modify vel yes
780c13bc3ce7
·Efrem Braun on Sep 12 2016, 12:53.
Made calculation of bond kinetic energies simpler, and replaced calculation of…
dcc6a175c8a0
·Efrem Braun on Sep 12 2016, 11:35.

Sep 11 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
fe49cbe4cc1f
·Axel Kohlmeyer on Sep 11 2016, 12:27.

Sep 10 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15563 f3b2605a-c512-4ea7…
99d5bf89bcdc
·sjplimp on Sep 10 2016, 21:48.

Sep 9 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
ed7d2d42252f
·Axel Kohlmeyer on Sep 9 2016, 12:36.

Sep 8 2016

update documentation for vashishta pair style
46f31424b034
·Axel Kohlmeyer on Sep 8 2016, 23:29.
created vashishta/table variant
4353fe8d91ce
·Axel Kohlmeyer on Sep 8 2016, 23:29.
sync with GH
b190abea390e
·sjplimp on Sep 8 2016, 22:20.

Sep 7 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
b0940dec80b5
·Axel Kohlmeyer on Sep 7 2016, 14:41.
GH changes to doc pages
5277242cfeed
·sjplimp on Sep 7 2016, 00:56.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15549 f3b2605a-c512-4ea7…
5568320bd6df
·sjplimp on Sep 7 2016, 00:05.

Sep 6 2016

Merge branch 'lammps-icms' of bitbucket.org:akohlmey/lammps-icms into lammps…
5b6992a9bf34
·Axel Kohlmeyer on Sep 6 2016, 23:04.
Made documentation and code of last commit more legible
1ce11d2227f0
·Efrem Braun on Sep 6 2016, 21:23.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15545 f3b2605a-c512-4ea7…
f9c106897f9b
·sjplimp on Sep 6 2016, 18:53.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15540 f3b2605a-c512-4ea7…
c21cf0364fc7
·sjplimp on Sep 6 2016, 18:33.
update fix ave/histo in compute rdf example
e1437e3451a9
·Axel Kohlmeyer on Sep 6 2016, 13:02.

Sep 5 2016

added in option to compute_bond_local to calculate bond velocities and kinetic…
245c70e91686
·Efrem Braun on Sep 5 2016, 23:42.

Sep 2 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
222e9de4c889
·Axel Kohlmeyer on Sep 2 2016, 15:02.

Sep 1 2016

Adding Kokkos version of PPPM
a4914bc9d80d
·stamoor on Sep 1 2016, 23:01.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
214494477854
·Axel Kohlmeyer on Sep 1 2016, 12:24.
chunk doc pages
3769f9077f4a
·sjplimp on Sep 1 2016, 03:58.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15532 f3b2605a-c512-4ea7…
f94bbc0de05e
·sjplimp on Sep 1 2016, 00:21.

Aug 31 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15529 f3b2605a-c512-4ea7…
bcb2e6dd380c
·sjplimp on Aug 31 2016, 23:10.
sync with Git
93c6c26b8396
·sjplimp on Aug 31 2016, 23:08.
small bug fixes
083ff54c0c51
·sjplimp on Aug 31 2016, 22:26.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15525 f3b2605a-c512-4ea7…
8f6439843d6b
·sjplimp on Aug 31 2016, 21:25.

Aug 28 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
dd3b0bfffd0e
·Axel Kohlmeyer on Aug 28 2016, 12:42.
Update documentation for tabulation in vashista pair style
39cec5cc191e
·Axel Kohlmeyer on Aug 28 2016, 05:01.
sync with Git
236241b10085
·sjplimp on Aug 28 2016, 01:09.
updated USER-MANIFOLD doc pages
57b24b566867
·sjplimp on Aug 28 2016, 01:07.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15514 f3b2605a-c512-4ea7…
fc4e63130cf8
·sjplimp on Aug 28 2016, 00:41.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15510 f3b2605a-c512-4ea7…
571489062727
·sjplimp on Aug 28 2016, 00:40.
new fix flow/gauss command
90e6032f973d
·sjplimp on Aug 28 2016, 00:18.

Aug 25 2016

Merge branch 'update-doc-user-manifold' of https://github.
8fa75760e419
·Axel Kohlmeyer on Aug 25 2016, 05:33.
fix typo in compute omega/chunk usage example
c71ffcfcc0e6
·Axel Kohlmeyer on Aug 25 2016, 05:30.
Merge branch 'merge-pull-140' into lammps-icms
998fa338f1cb
·Axel Kohlmeyer on Aug 25 2016, 00:15.

Aug 24 2016

Small update for USER-MANIFOLD docs.
d188bdbd8610
·Stefan Paquay on Aug 24 2016, 15:03.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
57fb84393a7a
·Axel Kohlmeyer on Aug 24 2016, 13:49.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15492 f3b2605a-c512-4ea7…
662335db13fd
·sjplimp on Aug 24 2016, 00:44.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15489 f3b2605a-c512-4ea7…
7bf1d9b40fe1
·sjplimp on Aug 24 2016, 00:17.

Aug 23 2016

Merge branch 'fix_bond_create_update' of https://github.com/aminaramoon/lammps…
62eeed768bde
·Axel Kohlmeyer on Aug 23 2016, 21:47.
Merge branch 'add-fix-gaussFlow' of https://github.com/sstrong99/lammps into…
d08e79702603
·Axel Kohlmeyer on Aug 23 2016, 19:18.
revised fix_flow_gauss
c1a6d2ec30dc
·Steven Strong on Aug 23 2016, 18:23.
revised fix_flow_gauss
5a5a10c75ff5
·Steven Strong on Aug 23 2016, 17:46.
doc revisited
5798ba9e57e1
·aaramoon on Aug 23 2016, 16:59.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
c90f3a800fba
·Axel Kohlmeyer on Aug 23 2016, 13:19.
update colvars library to version 2016-08-19
c67326be6d93
·Axel Kohlmeyer on Aug 23 2016, 11:53.
fixed integer division problem in python code snippet
55fe1f6b29cc
·athomps on Aug 23 2016, 00:35.

Aug 22 2016

Added fix_gaussflow
95755ba8b2e9
·Steven Strong on Aug 22 2016, 23:47.

Aug 21 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
ebbed707c6cf
·Axel Kohlmeyer on Aug 21 2016, 17:00.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15484 f3b2605a-c512-4ea7…
2fff78a78eb2
·sjplimp on Aug 21 2016, 00:43.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15482 f3b2605a-c512-4ea7…
ccf8cf20b378
·sjplimp on Aug 21 2016, 00:42.

Aug 17 2016

fix_bond_create_updated
180776e4f702
·aaramoon on Aug 17 2016, 16:12.

Aug 15 2016

thread timing summare needs to be marked as preformatted
b745636a6760
·Axel Kohlmeyer on Aug 15 2016, 04:01.

Aug 14 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
27d36f3f145b
·Axel Kohlmeyer on Aug 14 2016, 12:15.

Aug 13 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15475 f3b2605a-c512-4ea7…
832f6a9f1125
·sjplimp on Aug 13 2016, 16:52.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
e338a2f38619
·Axel Kohlmeyer on Aug 13 2016, 12:54.

Aug 12 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15471 f3b2605a-c512-4ea7…
c03252f08da0
·sjplimp on Aug 12 2016, 16:34.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15469 f3b2605a-c512-4ea7…
112c98159b1c
·sjplimp on Aug 12 2016, 15:49.

Aug 10 2016

update colvars to version 2016-08-10
f2ddf828e485
·Axel Kohlmeyer on Aug 10 2016, 15:03.

Aug 9 2016

change pair_coeff syntax for lj/sf/dipole/sf to be backward compatible and…
0369d79c398a
·Axel Kohlmeyer on Aug 9 2016, 16:28.
Merge branch 'balance-doc-fix' of https://github.com/ibethune/lammps into merge…
e55875a5a485
·Axel Kohlmeyer on Aug 9 2016, 15:25.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
96e415ad8af4
·Axel Kohlmeyer on Aug 9 2016, 13:01.

Aug 8 2016

Fix typo
3b8ecd5c0634
·Iain Bethune on Aug 8 2016, 15:55.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15460 f3b2605a-c512-4ea7…
17e8e9a9c98d
·sjplimp on Aug 8 2016, 15:48.

Aug 7 2016

update colvars library to version 2016-08-05
459db2eb6b7b
·Axel Kohlmeyer on Aug 7 2016, 15:54.
update documentation for refactored load-balancing
7abc061bf7b4
·Axel Kohlmeyer on Aug 7 2016, 05:31.

Aug 6 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
78b47137ba70
·Axel Kohlmeyer on Aug 6 2016, 13:22.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15456 f3b2605a-c512-4ea7…
0029040f1152
·sjplimp on Aug 6 2016, 00:12.

Aug 5 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15454 f3b2605a-c512-4ea7…
30d60075655c
·sjplimp on Aug 5 2016, 22:45.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15452 f3b2605a-c512-4ea7…
9a3b988b2b8e
·sjplimp on Aug 5 2016, 20:28.
Attempted to straighten out italics
36a0c644a906
·athomps on Aug 5 2016, 20:21.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15450 f3b2605a-c512-4ea7…
96a73d51cd98
·sjplimp on Aug 5 2016, 20:16.
clarified energy contribution to minimization energy
32c8c9d63e4e
·athomps on Aug 5 2016, 18:27.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15445 f3b2605a-c512-4ea7…
754103324663
·sjplimp on Aug 5 2016, 17:50.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15442 f3b2605a-c512-4ea7…
ce7581b86932
·sjplimp on Aug 5 2016, 17:38.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15439 f3b2605a-c512-4ea7…
82a29a8adbfe
·sjplimp on Aug 5 2016, 17:14.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15438 f3b2605a-c512-4ea7…
091fb71a9312
·sjplimp on Aug 5 2016, 17:14.

Aug 4 2016

Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
ad0633f7c142
·Axel Kohlmeyer on Aug 4 2016, 12:56.

Aug 3 2016

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15432 f3b2605a-c512-4ea7…
677da2ea52d9
·sjplimp on Aug 3 2016, 21:40.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15427 f3b2605a-c512-4ea7…
a6ade15e60bb
·sjplimp on Aug 3 2016, 18:29.

Aug 2 2016

update to colvars library version 2016-08-01
81b83331090b
·Axel Kohlmeyer on Aug 2 2016, 21:17.
minor tweaks and comment fixes
f14e9cee83da
·Axel Kohlmeyer on Aug 2 2016, 13:32.
whitespace cleanup
2e0b9cae2980
·Axel Kohlmeyer on Aug 2 2016, 12:41.
Merge branch 'lammps-icms' into balance-by-time
b635930cfd98
·Axel Kohlmeyer on Aug 2 2016, 12:33.
Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
cc487af9e494
·Axel Kohlmeyer on Aug 2 2016, 12:20.
implement wall clock based load balancing cost function support
2a57dc6db460
·Axel Kohlmeyer on Aug 2 2016, 07:17.
undo changes to the group command related to load balancing
047f313356ba
·Axel Kohlmeyer on Aug 2 2016, 01:06.
update documentation according to the modified implementation based on iain…
76b8bbca8ea8
·Axel Kohlmeyer on Aug 2 2016, 00:59.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15423 f3b2605a-c512-4ea7…
56502c7c0943
·sjplimp on Aug 2 2016, 00:57.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15420 f3b2605a-c512-4ea7…
1cdd1fd4f809
·sjplimp on Aug 2 2016, 00:43.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15419 f3b2605a-c512-4ea7…
69513a29ab6a
·sjplimp on Aug 2 2016, 00:40.

Aug 1 2016

Merge branch 'weighted_load_balance' of https://github.com/ibethune/lammps into…
aaac40dcb4d8
·Axel Kohlmeyer on Aug 1 2016, 21:46.

lammps/doc/srcmasterdb1e17197fcfc1b5dc4c472…

Sep 15 2016

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lammps/doc/src
masterdb1e17197fcfc1b5dc4c472…