Diffusion µSpectre (intersection_octree) History

History
intersection_octreeb30cacf3332356e69ddfc64…

Apr 13 2018

initial dockerfile
b30cacf33323
·branch: feat/T1927_CI
·junge on Apr 13 2018, 10:55.

Apr 11 2018

ENH: Allow specification of FFT engine in Python binding of Projection classes.
9bdf35ab788f
·D181
·pastewka on Apr 11 2018, 15:40.

Apr 6 2018

Optional Compilation of non-mandatory parts
2afdf047f54e
·D180
·junge on Apr 6 2018, 15:13.

Apr 4 2018

Implementation of T1920 and meaningfull error message if a user dont has mpi4py…
620865a692a8
·D178
·RLeute on Apr 4 2018, 13:39.

Apr 3 2018

MAINT: Moved 'lengths' from FFTEngine to Projection
6acade5140d1
·D177
·junge on Apr 3 2018, 15:59.

Mar 30 2018

ENH: MPI parallelization
656437418c7e
·D174
·pastewka on Mar 30 2018, 13:55.
added a ref to de Geus
b6e79168b2d4
·D173
·junge on Mar 30 2018, 10:40.

Mar 26 2018

Complete draft of coding convention
3d9fd45f1098
·D171
·junge on Mar 26 2018, 16:09.

Mar 22 2018

Implementation of a ProjectionError for even grids, need discussion
dad5c7939db6
·D168
·RLeute on Mar 22 2018, 16:58.

Mar 17 2018

Merge branch 'arcpatch-D169' into feat/documentation
45c48a4eea3e
·junge on Mar 17 2018, 16:13.

Mar 16 2018

DOC: Added documentation for undocumented members.
3795c8590d33
·pastewka on Mar 16 2018, 20:44.
Made the communicator effc++ compatible
9137a5a94322
·junge on Mar 16 2018, 19:42.
ENH: First implementation of MPI parallelization.
fad17c728490
·D169
·junge on Mar 16 2018, 17:52.
ENH: First implementation of MPI parallelization.
acb656fa2706
·D169
·junge / pastewka on Mar 16 2018, 17:51.
WIP: Updated language bindings to reflect recent changes in API.
0f03cbf18341
·pastewka on Mar 16 2018, 17:23.
WIP: HAVE_MPI should have been WITH_MPI
b3d3315e59c7
·pastewka on Mar 16 2018, 17:23.
WIP: Enabled and updated MPI parallel patch test.
679cc5d1e141
·pastewka on Mar 16 2018, 16:45.
WIP: Added convenience functions to create parallel cells.
2c848fe691c0
·pastewka on Mar 16 2018, 16:45.
WIP: Added communication for reduction operations in newton_cg solver.
49ed256c1c21
·pastewka on Mar 16 2018, 16:06.
WIP: Updated FindPFFT.cmake and CMakeLists.txt.
5fbc4b9ec5ea
·pastewka on Mar 16 2018, 16:04.
WIP: Removed constexpr for get_mpi_comm
7e94129d056b
·pastewka on Mar 16 2018, 13:36.
WIP: get_index needs locations argument
c8689277da3a
·pastewka on Mar 16 2018, 13:35.

Mar 15 2018

WIP: de_geus solver converges
d10e89d0559c
·pastewka on Mar 15 2018, 22:19.
WIP: SolverCG appears to be working in parallel.
a2980762715b
·pastewka on Mar 15 2018, 22:12.
WIP: FFTEngineBase now holds the communicator object and returns it via…
a012163a1acd
·pastewka on Mar 15 2018, 12:06.

Mar 14 2018

WIP: Added missing locations argument.
82ece615f31c
·pastewka on Mar 14 2018, 22:52.
Merge branch 'master' into feat/mpi
e0d06241ed6c
·pastewka on Mar 14 2018, 22:43.
WIP: Added reduction operations to SolverCG
54fd54f58bb3
·pastewka on Mar 14 2018, 22:43.
WIP: Cosmetics.
604b3aea55c8
·pastewka on Mar 14 2018, 22:42.
WIP: Cleaned up tests.
588d8ec12963
·pastewka on Mar 14 2018, 22:11.
WIP: Pass locations to FieldCollection and Field initialisation.
d5ff24969ab5
·pastewka on Mar 14 2018, 22:10.
WIP: Need to use domain resolutions when constructing FFT frequencies.
b9f21ca7059d
·pastewka on Mar 14 2018, 22:09.
WIP: FieldCollection now stores locations.
55ceb30bb1dd
·pastewka on Mar 14 2018, 22:08.
WIP: Added rank() methode to Communicator
e811f3fd699f
·pastewka on Mar 14 2018, 22:08.
WIP: Workspace pixel initialisation in constructor.
754daaa29768
·pastewka on Mar 14 2018, 22:07.
WIP: Pass fourier_locations to Pixels constructor.
28aefceabbc5
·pastewka on Mar 14 2018, 22:06.

Mar 13 2018

WIP: Initialize resolutions in constructor.
df4c18badb4a
·pastewka on Mar 13 2018, 23:21.
WIP: get_ccoord now rewuires a locations argument
f5b715ef4d96
·pastewka on Mar 13 2018, 22:30.
WIP: Initialize norm factor with global resolution
ecf0cc137415
·pastewka on Mar 13 2018, 22:29.
WIP: hermitian resolutions are now fourier resolution and stored in the base…
2ab73bcca627
·pastewka on Mar 13 2018, 22:28.
amended the dependencies in the documenatation
3b781c4548aa
·D167
·afalsafi on Mar 13 2018, 16:37.
Fix for clang 6 and FFTW engine
6d2a10904234
·junge on Mar 13 2018, 13:53.
WIP: Replace public resize with explicit pad size information in FieldBase
b4cb16585ec0
·pastewka on Mar 13 2018, 08:36.
Revert "WIP: Made 'resize' of Field* public. MPI FFTW needs to enlarge the…
af6fe4b0838c
·pastewka on Mar 13 2018, 08:10.
WIP: 0,0 grid locations resides on one of the MPI processes only.
47ee34680901
·pastewka on Mar 13 2018, 08:06.

Mar 12 2018

WIP: Enlarge workspace buffer size.
2bc3f223ffd3
·pastewka on Mar 12 2018, 23:09.
WIP: Made 'resize' of Field* public. MPI FFTW needs to enlarge the underlying…
4c7b0a9182d0
·pastewka on Mar 12 2018, 23:08.
WIP: Pixels now knows about its (subdomain) location. Cell now knows about its…
73227f25ca34
·pastewka on Mar 12 2018, 09:53.
WIP: Updated documentation strings
ec9658d29131
·pastewka on Mar 12 2018, 09:51.

Mar 11 2018

WIP: Added locations and domain_resolutions getter
3aec5854ce6a
·pastewka on Mar 11 2018, 21:49.
WIP: Transpose pixels for local grid collection
61c29d7aa0bc
·pastewka on Mar 11 2018, 21:43.
WIP: Pixels class has now a 'transposed' template arguments, that tells it that…
69269354677a
·pastewka on Mar 11 2018, 21:42.
WIP: Added MPI projection tests.
7d0715fa3a89
·pastewka on Mar 11 2018, 15:03.
WIP: Code documentation.
5fe9ac0f30af
·pastewka on Mar 11 2018, 14:48.
WIP: Switched MPI FFT test to FFTW.
52dd54d702df
·pastewka on Mar 11 2018, 14:46.
WIP: MPI FFTW with transposed output works.
bdffe49ba820
·pastewka on Mar 11 2018, 14:46.

Mar 9 2018

WIP: MPI FFTW running on one process works.
134496a0631a
·pastewka on Mar 9 2018, 23:10.
Merge branch 'master' into feat/mpi
9e8c21080050
·pastewka on Mar 9 2018, 22:14.
WIP: Introduced temporary padded input buffer.
fe3b985a45d1
·pastewka on Mar 9 2018, 22:13.
WIP: Check whether plan has been created.
5da4c1e565f9
·pastewka on Mar 9 2018, 22:12.
Treating the headers in cmake
21380f6855fb
·D166
·richart on Mar 9 2018, 14:42.

Mar 8 2018

WIP: Apple Xcode fixes.
e04e00a7da8a
·pastewka on Mar 8 2018, 22:27.
WIP: Remove material dimension from FieldCollections in MPI test.
4c60859318c1
·pastewka on Mar 8 2018, 22:04.
WIP: FFT_Engine_base -> FFTEngineBase
d496d6dc66ef
·pastewka on Mar 8 2018, 22:02.
Merge branch 'master' into feat/mpi
da031383b328
·pastewka on Mar 8 2018, 21:59.

Mar 7 2018

WIP: MPI FFT test compiles with PFFT. No passes yet.
226e73ee26b3
·pastewka on Mar 7 2018, 22:37.
WIP: Pass engine as template parameter to fixture.
9f12c77c8f3e
·pastewka on Mar 7 2018, 22:34.
WIP: Added initial PFFT engine.
67eab82a3480
·pastewka on Mar 7 2018, 22:29.
WIP: mpi_type template specializations must be inline.
83364edb689a
·pastewka on Mar 7 2018, 22:29.
WIP: Use transposed local size planner.
2ecbb615921a
·pastewka on Mar 7 2018, 21:50.
Cleanup: FieldCollection template params and FFT engine class names
eabe0571c30f
·junge on Mar 7 2018, 21:25.
Renamed 'system' to 'cell'
a5fb8e631773
·junge on Mar 7 2018, 21:06.
WIP: µSpectre -> muSpectre
8b9802aff52a
·pastewka on Mar 7 2018, 20:39.
Merge branch 'master' into feat/internal_variables_T1831
7e681271d663
·junge on Mar 7 2018, 18:22.
Documented StateField and MaterialHyperElastoPlastic
765b0c2992fb
·branch: feat/internal_variables_T1831
·junge on Mar 7 2018, 18:03.
MaterialHyperElastoPlastic1 is tested
bd957ecc8bea
·junge on Mar 7 2018, 16:36.
DOC: Added doc strings.
dd750abedf3d
·pastewka on Mar 7 2018, 14:20.
WIP: Need to compute size over all MPI processes.
db091a2cb915
·pastewka on Mar 7 2018, 14:20.
WIP: Added more MPI datatypes.
19953a579bd8
·pastewka on Mar 7 2018, 14:19.
WIP: Have FFTWMPIEngine and tests use the abstracted communicator.
97d0f6555d13
·pastewka on Mar 7 2018, 14:12.
WIP: First implementation of communicator abstraction.
decf9cec7830
·pastewka on Mar 7 2018, 14:12.
WIP: Added MPI communicator as parameter.
d4e48703df52
·pastewka on Mar 7 2018, 13:05.
WIP: fftw_engine_mpi -> fftwmpi_engine
5bef87e106a1
·pastewka on Mar 7 2018, 12:57.
WIP: Added MPIContext singleton that takes care of initializing and tearing…
aa4e5de45421
·pastewka on Mar 7 2018, 12:54.
WIP: Separated MPI tests into their own executable.
3bed7073861b
·pastewka on Mar 7 2018, 12:40.
WIP: Refactoring; FFTWEngineMPI -> FFTWMPIEngine
ee2ccfcd7563
·pastewka on Mar 7 2018, 12:39.
found and fixed mishandled temporary in MaterialHyperElastoPlastic1
9ba60d3594e4
·junge on Mar 7 2018, 02:14.

Mar 6 2018

still writing tests for plastic material
d2cb3c0afe23
·junge on Mar 6 2018, 23:23.
WIP: First version of MPI FFTW test.
ab3be79af63e
·pastewka on Mar 6 2018, 22:31.
DOC: Updated file header.
10f97f358ddc
·pastewka on Mar 6 2018, 21:29.
WIP: Added dummy FFTWEngineMPI. Updated CMakeLists.txt to search for MPI and…
b03a5940750b
·pastewka on Mar 6 2018, 21:24.
WIP: Added and members to FFTEngineBase.
a36d0413024a
·pastewka on Mar 6 2018, 21:23.
writing plastic material tests
0768940e9a0a
·junge on Mar 6 2018, 17:52.
Added StateField convenience functions (concludes T1902)
99f8679e6125
·junge on Mar 6 2018, 13:02.
Added StateField (T1902)
d3affecf925c
·junge on Mar 6 2018, 11:49.

Feb 27 2018

MaterialHyperElastoPlastic1 -> need for History Fields?
8af34878344f
·junge on Feb 27 2018, 18:09.

Feb 26 2018

Documentation cleanup
8dad2be6502e
·junge on Feb 26 2018, 17:38.
Merge branch 'master' into feat/documentation
c18a1858c312
·junge on Feb 26 2018, 17:22.
Merge branch 'feat/documentation' of ssh://c4science.ch/source/muSpectre into…
5b3e095ebb00
·junge on Feb 26 2018, 17:21.
added "Writing a New Constitutive Law" tutorial
57e889b22b09
·junge on Feb 26 2018, 17:20.

Historyintersection_octreeb30cacf3332356e69ddfc64…

Apr 13 2018

Apr 11 2018

Apr 6 2018

Apr 4 2018

Apr 3 2018

Mar 30 2018

Mar 26 2018

Mar 22 2018

Mar 17 2018

Mar 16 2018

Mar 15 2018

Mar 14 2018

Mar 13 2018

Mar 12 2018

Mar 11 2018

Mar 9 2018

Mar 8 2018

Mar 7 2018

Mar 6 2018

Feb 27 2018

Feb 26 2018

History
intersection_octreeb30cacf3332356e69ddfc64…