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History Graph
Commit | Author | Details | Committed | ||||
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e882181496b7 | fabien | start work on a the transport oslver with neutrality | Oct 15 2014 | ||||
f42f76860daf | fabien | adapt reduce_system_Solver to allow minerals that can't dissolve | Oct 10 2014 | ||||
4607780abc35 | fabien | add support for not dissolving/not precipitating minerals in database | Oct 10 2014 | ||||
9ac10ec69a99 | fabien | reduce header dependancy | Oct 9 2014 | ||||
e72e464ed90b | fabien | add again the contribution of the descent step direction, change dection of… | Oct 9 2014 | ||||
69f1f340a8f5 | fabien | use typedef | Oct 9 2014 | ||||
da3d68efcce0 | fabien | add example directory | Oct 8 2014 | ||||
afebadac83de | fabien | correct name of reactmicp test folder to tests/reactmicp | Oct 8 2014 | ||||
a3fe40ba7210 | fabien | add axissymmetric mesh 1d, one file per mesh, add reactmicp/mesh.hpp | Oct 8 2014 | ||||
d7e3744afdfe | fabien | correct type in safeguard | Oct 8 2014 | ||||
a82ae4d34189 | fabien | Prepare mesh module for asymmetric mesh | Oct 8 2014 | ||||
dbcf1c3de1b8 | fabien | add transport options into reactive transport options | Oct 8 2014 | ||||
e5216c0292f7 | fabien | detect linesearch failure in MiCPSolver, which allow restart in… | Oct 8 2014 | ||||
a70d03795fe6 | fabien | delete previous files added by mistake | Oct 6 2014 | ||||
48eb4f5d4263 | fabien | Merge branch 'reactivetransport' of bitbucket.org:fabieng/specmicp into… | Oct 6 2014 | ||||
c7ac0a493911 | fabien | update database, micpsolver and specmicp to use common.hpp | Oct 6 2014 | ||||
032d87790f74 | fabien | update database, micpsolver and specmicp to use common.hpp | Oct 6 2014 | ||||
c46a22fd727b | fabien | modify reactmicp and dfpmsolver to use common.hpp | Oct 6 2014 | ||||
a04acf96600a | fabien | modify equilibrium data so it uses the new common.hpp | Oct 6 2014 | ||||
eb7779e20fdf | fabien | add common.hpp, modify database module to use it | Oct 6 2014 | ||||
191d56f41074 | fabien | add cmakefile in directory test | Oct 3 2014 | ||||
e5484eae1665 | fabien | remove unecessary files | Oct 3 2014 | ||||
1461da1319e9 | fabien | improve fixed-point iteration solver | Oct 3 2014 | ||||
83e1af765087 | fabien | SIA reactive transport start to work | Oct 1 2014 | ||||
f0bae6f199e0 | fabien | add scaling method in EquilibriumState | Oct 1 2014 | ||||
48743d675901 | fabien | add method to compute residuals from outside, and adjust logging message | Oct 1 2014 | ||||
49aeec52193c | fabien | start working on BCs and ther applications | Sep 28 2014 | ||||
a68894083238 | fabien | update and coupling utils in SIASaturatedVariables | Sep 28 2014 | ||||
eebb86eba7d7 | fabien | add residuals and update norms in performance for parabolic solver | Sep 26 2014 | ||||
35e7d8aacfae | fabien | add residual and update norm in performance for micpsolver | Sep 26 2014 | ||||
6110aa030886 | fabien | allow the non-conservation of water in reaction_path/reduce_system | Sep 26 2014 | ||||
8342bd67907c | fabien | dfpmsolver, and saturated_diffusion program can be solved | Sep 26 2014 | ||||
b5fde6377526 | fabien | start working on SIA solver | Sep 25 2014 | ||||
f1c39bf54729 | fabien | reactive transport - fully implicit ... does not work | Sep 25 2014 | ||||
90597818e3ba | fabien | towards a correct code ? | Sep 24 2014 | ||||
68b7dab0dd3d | fabien | it works \o/ | Sep 21 2014 | ||||
26456e9e2cd2 | fabien | add a few methods to EquilibriumState | Sep 21 2014 | ||||
8a4ab92c89b3 | fabien | Correct bug in ionic strength computation in Reducedsystem | Sep 21 2014 | ||||
8659642b7a98 | fabien | MiCPParabolicSolver runs, does not solve anything | Sep 11 2014 | ||||
141e6db490b4 | fabien | correction of bugs due to merging, also use new database range_* function in… | Sep 10 2014 | ||||
fe4a3c6ffe37 | fabien | Merge branch 'reactivetransport' | Sep 10 2014 | ||||
8d16e3a0c811 | fabien | remove thermodata.hpp, use DataContainer in reduced solver | Sep 10 2014 | ||||
d01a0c53637d | fabien | add the main diffusion system | Sep 10 2014 | ||||
f1b23f04d9ad | fabien | introducing DiffusionSecondary for activity coefficient and concentration of… | Sep 10 2014 | ||||
e0f20360e06e | fabien | move and improve equation numbering for diffusion reactive transport system | Sep 10 2014 | ||||
43a8958938af | fabien | jacobian and residuals computation - not tested | Sep 10 2014 | ||||
4873112352b5 | fabien | add range support in database::DataContainer | Sep 10 2014 | ||||
54f4e1c465c9 | fabien | bug correction for diffusion system | Sep 10 2014 | ||||
b1dec92efd3e | fabien | first commit on branch reactivetransport | Sep 10 2014 | ||||
f19180e3b265 | fabien | improving the CMake file to compile the python interface | Sep 9 2014 | ||||
f401e32a96d2 | fabien | thermocarbo.py is running ok | Sep 9 2014 | ||||
f89b95873e65 | fabien | The python interface is able to solve the first step of thermocarbo | Sep 9 2014 | ||||
5ece8356c796 | fabien | use shared_ptr instead of raw ptr in database module | Sep 9 2014 | ||||
ba25334b0c65 | fabien | Wrapper for ReducedSystemSolverOptions | Sep 9 2014 | ||||
5d8bdeedf9e7 | fabien | complete ReactionPathSimulation | Sep 9 2014 | ||||
5d71ccc1da23 | fabien | Starting the work on the reaction path solver | Sep 8 2014 | ||||
3dbb26cb459b | fabien | comments and documentation | Sep 8 2014 | ||||
41ba8a2a83cb | fabien | create module specmicp and add unit tests | Sep 8 2014 | ||||
84dc444f1a49 | fabien | swapping components and removing minerals is now possible in python | Sep 8 2014 | ||||
cc762abbb0d9 | fabien | first commit to cython branch, start interface for database | Sep 7 2014 | ||||
02c100013be0 | fabien | improve thermocarbo and carboalu test | Sep 5 2014 | ||||
54f50e62ff4b | fabien | reintroduce the old solver, for a ~working min solver | Sep 5 2014 | ||||
b9fd53649f8f | fabien | check if mineral species contribute to total concentration | Sep 5 2014 | ||||
bcbf5078d653 | fabien | try helping convergence of min-FB linesearch algorithm - does not work | Sep 5 2014 | ||||
8da8a817bca6 | fabien | correction of C3S,C2S dissolution | Sep 5 2014 | ||||
07a62349e37e | fabien | use the activity for the pH, not the molality | Sep 1 2014 | ||||
d08941d1b3b4 | fabien | comment and docs for database modules | Aug 19 2014 | ||||
f58dc561296c | fabien | general documentation | Aug 19 2014 | ||||
cdf13a8c9cff | fabien | comments and doc, correctition of bug in micpsolver no_scaling | Aug 19 2014 | ||||
879414fa334f | fabien | comments and doc for reduced system solver | Aug 19 2014 | ||||
510760a8471f | fabien | correct and add comments EquilibriumState | Aug 19 2014 | ||||
a583a91abe36 | fabien | comment and small refactoring for ReactionPathDriver | Aug 19 2014 | ||||
e9f68b0250c3 | fabien | simplify initialisation of reaction path driver | Aug 18 2014 | ||||
fdefa22a007e | fabien | Merge branch 'cleaning' | Aug 18 2014 | ||||
be84b355a07d | fabien | change copyright | Aug 18 2014 | ||||
2555d4790cc7 | fabien | cleaning not working gasphase in reduce_system | Aug 18 2014 | ||||
768489c0ad3e | fabien | after a long absence, start cleaning | Aug 18 2014 | ||||
fbc3b1f9f7c0 | georget | more small corrections and preparations for the gas phase | Jun 20 2014 | ||||
881a9cd5b582 | georget | correct wrong activity coefficients in solution when ther is inactive components | Jun 19 2014 | ||||
e4061f7461ed | georget | Use 'full' warmstart to improve computation | Jun 18 2014 | ||||
54afcac13afc | georget | Make sure that the activity coefficients are computed correctly - They are not ! | Jun 18 2014 | ||||
9320d65b0bd7 | georget | start implementing the fixed volume problem | Jun 17 2014 | ||||
191e81a7b47a | georget | separate common laws, constant and unit conversion in their own files | Jun 17 2014 | ||||
4d7d50dc1a4f | georget | add some constants and trivial laws | Jun 17 2014 | ||||
f1b51879d2ec | georget | correct initialization of eigen solver - valgrind output is now ok | Jun 16 2014 | ||||
392b50f45f16 | georget | start support of gas phase in database | Jun 16 2014 | ||||
2fba35c488d9 | georget | correct initialization of eigen solver - valgrind output is now ok | Jun 16 2014 | ||||
589209012905 | georget | README.md edited online with Bitbucket | Jun 5 2014 | ||||
f56e766e76f1 | georget | README.md edited online with Bitbucket | Jun 5 2014 | ||||
f5ff5181ce69 | georget | add source file for data_container... | Jun 5 2014 | ||||
0c3c7d5946e5 | georget | add readme.md | Jun 5 2014 | ||||
b53f240bd6a4 | georget | everything compiles and run | Jun 5 2014 | ||||
9bb9fb95bbcf | georget | add support for molar volume of minerals | Jun 5 2014 | ||||
bfff495f16bd | georget | add support for molar mass | Jun 5 2014 | ||||
583c1a0f5574 | georget | clean directory before merging branch | Jun 4 2014 | ||||
35b1899b35ba | georget | Improve EquilibriumState, use it in examples | Jun 4 2014 | ||||
36b376748b48 | georget | add EquilibriumState to store and manage solution of equilibrium computation | Jun 4 2014 | ||||
7534f1230322 | georget | add test to develop kinetics | Jun 4 2014 | ||||
063a9f5832a7 | georget | correct bug in database - allow selection of components | Jun 3 2014 | ||||
f41982d51b13 | georget | adaptative step for embedded runge kutta | Jun 2 2014 |
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