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Diffusion tamaas (features/netcdf-mpi) Graph

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features/netcdf-mpi

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CommitAuthorDetailsCommitted
74509e1d1987frerot
added traction and displacement properties to model bindings 
Jan 5 2021
7be77d61e712frerot
adding [] operator to Model class 
Jan 5 2021
9054b97f8b37frerot
modified dumpers for new interface 
Jan 5 2021
af6a620b3dcefrerot
const correctness of fftengine 
Jan 4 2021
2316c9ebcdd7frerot
copyright year 2021 
Jan 1 2021
8b57ac4133c5frerot
added number of dumpers in model << output 
Dec 31 2020
cbd238489088frerot
updated tests for new interface 
Dec 31 2020
65506d9f82cffrerot
bump version to 2.2.0 
Dec 31 2020
7a837ca5513afrerot
updated examples to use more pythonic interface 
Dec 31 2020
49155381f7a4frerot
added __call__ to IntegralOperator bindings 
Dec 31 2020
07bf72fea9ccfrerot
calling setSizes in SurfaceGenerator constructor 
Dec 31 2020
560001b7e019frerot
adding a constructor with global shape to surface generators 
Dec 31 2020
9d2cf7093171frerot
more pythonic bindings of surface generators, solvers and flood fill 
Dec 31 2020
dd69668f7622frerot
added bounding box computation for clusters 
Dec 31 2020
cfbbd07ff0cffrerot
more pythonic interface for accessing integral operators 
Dec 30 2020
1597124d7ae9frerot
[TEST] added an mpi version of plasticity patch test 
Dec 15 2020
44fd0470bd21frerot
renamed USE_CUDA macro to TAMAAS_USE_CUDA 
Dec 14 2020
5b9baa398081frerot
[BUILD] incrementally checking for requested fftw components 
Dec 14 2020
077b1feba4c2frerot
[DOC] added figure for data distribution 
Dec 11 2020
92343fd27ef3frerot
added documentation on MPI 
Dec 10 2020
0670ef204b92frerot
not writing gtest xml with mpirun 
Dec 10 2020
460a2d811c4efrerot
only warning once about mpi 
Dec 10 2020
d3adb8781f6efrerot
adapted plasticty example for mpi 
Dec 10 2020
cbef215a579dfrerot
properly setting size of underlying array in grid views 
Dec 10 2020
6497fb26e47cfrerot
skipping headless test when not on root process 
Dec 10 2020
73a8b44d38cefrerot
updated stress example to run with mpi 
Dec 9 2020
c6cda5e747befrerot
added newline for debug messages 
Dec 9 2020
10c9ddd1e0e0frerot
fixed a bug in the computation of grid strides 
Dec 9 2020
50989776262efrerot
added back the old pkr mpi test 
Dec 9 2020
02240a9f1952frerot
correcting fundamental mode only on root rank 
Dec 8 2020
695f2e0111b0frerot
protecting mkdir in @directory_dump 
Dec 8 2020
74402ed7185cfrerot
added readonly properties to python model bindings 
Dec 8 2020
fe04638c6ab7frerot
adding method for global discretization in model 
Dec 8 2020
eed5bd5407defrerot
converting only dumped fields in hdf5toVTK 
Dec 8 2020
12b7e837ead0frerot
not running mpi h5dumper test when hdf5 has no mpi support 
Dec 8 2020
6f1bb5d3d5cefrerot
added helper function to convert hdf5 model dump to VTK 
Dec 8 2020
83b12befa682frerot
uniform debug messages with TAMAAS_DEBUG_MSG macro 
Dec 8 2020
f739905b88d2frerot
raising exception if scipy solvers are used with MPI 
Dec 8 2020
09b1019f9242frerot
use uvw.RectilinearGrid instead of parallel variant 
Dec 8 2020
09634dfd5d9dfrerot
adding has_mpi to TamaasInfo class 
Dec 7 2020
d9c3d9f292dafrerot
added tolerance on components tests 
Dec 5 2020
1af5c7f89584frerot
raising when NumpyDumper is called in parallel 
Dec 4 2020
a9371b17cdd2frerot
prepared implementation of parallel dumpers 
Dec 4 2020
b4ec536528a2frerot
added type traits to python interface 
Dec 4 2020
cce181f1da1ffrerot
added convenience size/rank to mpi bindings 
Dec 2 2020
90e419eb7a0afrerot
changed tm.to_voigt uses to tm.compute.to_voigt 
Dec 1 2020
f9fadc483c40frerot
moved mpi function bindings to their own submodule 
Dec 1 2020
efd5776aa2c0frerot
fixing fftwmpi tests 
Dec 1 2020
4022e3acd5e6frerot
testing parallel pkr with hertz instead of sequential pkr 
Dec 1 2020
24b0fa8bbc51frerot
making an fftengine on the fly in stats functions 
Dec 1 2020
3503d740b538frerot
added wrapping of local_{size,offset} partitioner functions 
Dec 1 2020
e290de0838e8frerot
added some debug log messages 
Nov 27 2020
fdea6b4ef4a4frerot
Merge branch 'feature/mpi_fft_engine' 
Nov 25 2020
14f13ab72ad0frerot
adjusting mpi tests 
Nov 25 2020
f5786e6cbefffrerot
added experimental mpi warning 
Nov 25 2020
945eedca11adfrerot
added backwards fft 2d tests (counterpart of mpi test) 
Nov 25 2020
54aab33e784afrerot
added a function to compute deviatoric of sym tensor fields 
Oct 23 2020
eeeb65577efffrerot
turn on flag TAMAAS_USE_PYTHON 
Sep 3 2020
671a3a805986frerot
adjusting tolerance of test FFT1D2Comp 
Sep 3 2020
a18819dd25e3frerot
rename USE_MPI to TAMAAS_USE_MPI 
Sep 1 2020
ddb30ba41df9frerot
Merge branch 'master' into feature/mpi_fft_engine 
Sep 1 2020
0f3eef3f390efrerot
removed useless operator= for ToleranceManager 
Aug 31 2020
5e6c40b035b2frerot
silenced warnings about deprecated copy ctors 
Aug 31 2020
5471cb70c676frerot
linking with libpython${version} to test_gtest_all 
Aug 31 2020
c9eb34ff4665frerot
added helper method to compute (corrected) contact areas 
Aug 13 2020
19806151094ffrerot
[DOC] refreshed description of installtion with pip 
Aug 8 2020
3838c1d4ac9dfrerot
prefer this email 
Aug 8 2020
f59e8b7c2de2frerot
changes to setup.py to build python 2 wheels 
Aug 8 2020
69c13358055dfrerot
fixing errors for python 2 
Aug 7 2020
87df0438ac11frerot
making sure libTamaas is linked first 
Aug 7 2020
bb36f61af70afrerot
updating emails and refreshing pipe_tools 
Aug 6 2020
32f729beef69frerot
adding a backwards transform test 
Aug 6 2020
80617eef9978frerot
allowing other fftw flags in mpi engine 
Aug 6 2020
9d631430e38ffrerot
reducing float test tolerance to 4ε 
Aug 6 2020
fc7139c685e4frerot
[DOC] added dependencies to generate doc for dumpers and solvers 
Aug 5 2020
87299a2f0e72frerot
overwrite netcdf file on first dump 
Aug 5 2020
555b9d18b1d5frerot
creating variables with right dimensions in netcdf dumper 
Aug 5 2020
357aabe906d0frerot
netcdf dumper now writes frames to a single file 
Aug 4 2020
af71e726e2e4frerot
matching documentation version to tamaas' version number 
Aug 4 2020
78c0e4b6a293frerot
laxer detection of Thrust headers 
Aug 4 2020
4281604d9e17frerot
[DOC] adding paragraph on integration methods 
Aug 3 2020
0aff1cd1a985frerot
Merge branch 'feature/dfsane' 
Aug 3 2020
65b794bf9f7bfrerot
testing all non-linear solvers in plasticity patch test 
Aug 3 2020
03fcf739ce5afrerot
allowing the use of ToleranceManager on C++ solvers 
Aug 3 2020
498377ca55e4frerot
added tolerance manager to plasticity example 
Aug 3 2020
510fc333cb53frerot
tested implementation of C++ DFSANESolver 
Aug 3 2020
e1de40e29467frerot
avoid duplication of -fPIC flag 
Aug 3 2020
b4d19b07637bfrerot
checking all variants of FFTW when requested 
Aug 3 2020
d6d8134e1bbafrerot
allowing compilation without OpenMP 
Aug 2 2020
cf36e15d08a3frerot
tentative implementation of DFSANESolver 
Aug 1 2020
d38b418143c0frerot
prettier compilation outputs in non-verbose mode 
Jul 31 2020
83e7b905b82dfrerot
[DOC] correct formatting of nested lists 
Jul 30 2020
5417ce428c72frerot
added shield(s.io) to c4science project page 
Jul 30 2020
b872df23a6a3frerot
[DOC] added tamaas python package as requirement 
Jul 29 2020
8db558711c4cfrerot
avoiding circular imports 
Jul 29 2020
cbe79569b127frerot
renamed packaging_setup option to build_static_lib 
Jul 29 2020
77e32d9a06e7frerot
packaging setup now generates static libTamaas 
Jul 29 2020
1730c72ac54ffrerot
[JOSS] added missing DOI for Archard (1957) 
Jul 28 2020
4fe90e4e93edfrerot
[DOC] uniformizing titles and descriptions of Tamaas 
Jul 28 2020
5834c8d64134frerot
[DOC] adding various badges 
Jul 28 2020
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