Graphfeatures/netcdf-mpi
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features/netcdf-mpi
History Graph
History Graph
Commit | Author | Details | Committed | ||||
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ca4efcdb8137 | frerot | modifiying scons files to build documentation | Mar 11 2021 | ||||
9fb58159f76b | frerot | [doc] changed organization to have proper headings with PDF export | Mar 9 2021 | ||||
659ebdd10165 | frerot | using absolute path for env variables with `scons test` | Mar 8 2021 | ||||
754d1b054d56 | frerot | removing useless symmetrize function in residual | Mar 8 2021 | ||||
a86403a40a4c | frerot | Fixing formatting of CHANGELOG for Phabricator | Mar 4 2021 | ||||
7042e2deb2e9 | frerot | [ci] adjusting pythonpath for gitlab | Mar 4 2021 | ||||
d4bd896bf490 | frerot | [ci] modifying variable substitution | Mar 4 2021 | ||||
1c24294792a0 | frerot | [ci] using abssolute path in PYTHONPATH for gitlab | Mar 4 2021 | ||||
e493f4f740f1 | frerot | [ci] using absolute path in PYTHONPATH for Jenkins | Mar 4 2021 | ||||
a8eb73eedf0c | frerot | added a CHANGELOG | Mar 4 2021 | ||||
0c1bc986d3bc | frerot | [ci] added gitlab ci file | Mar 3 2021 | ||||
881abfa51439 | frerot | [tests] not running mpi googletest if not compiled with mpi | Mar 3 2021 | ||||
998c3fbb422f | frerot | performing basic configure checks | Mar 2 2021 | ||||
fc8c55c14612 | frerot | adding custom CXXFLAGS to LINKFLAGS | Mar 2 2021 | ||||
5fab848001d9 | frerot | added documentation on build options and parallelism backends | Mar 2 2021 | ||||
1dc8d369d30a | frerot | [site_scons] improved error message on missing FFTW component | Mar 2 2021 | ||||
6a7d4ffae178 | frerot | [Jenkins] deactivated MPI | Feb 17 2021 | ||||
bbe89c53f398 | frerot | [Jenkins] calling setup.py instead of pip | Feb 17 2021 | ||||
5bf4b38644ad | frerot | [Jenkins] added user flag | Feb 17 2021 | ||||
cac4e58769c5 | frerot | installing tamaas before running tests on Jenkins | Feb 17 2021 | ||||
29befdea798a | frerot | updated submodules | Feb 17 2021 | ||||
2c28855671d3 | frerot | missed some 2021 copyright years | Feb 16 2021 | ||||
7c3d7a73b30c | frerot | printing some important build options | Feb 16 2021 | ||||
1b416aafdfde | frerot | using tmp_path fixture for dumper tests | Feb 16 2021 | ||||
9863efdd4c01 | frerot | added choice of fftw thread model in scons | Feb 15 2021 | ||||
4d191557195e | frerot | ignoring netcdf dumps in examples | Feb 15 2021 | ||||
46db5babbf1a | frerot | setup netcdf dumper for parallel writes | Jan 14 2021 | ||||
52d7a59667cb | frerot | [site_scons] handling "not in git repo" error + using HEAD instead of @ | Jan 13 2021 | ||||
e777fc6611a0 | frerot | fixed remnants of deprecated stuff in examples | Jan 13 2021 | ||||
2b523bbf68a7 | frerot | stopped using leading and trailing __ in header guards | Jan 7 2021 | ||||
10e17acc88ce | frerot | Merge branch 'deprecated_bindings' | Jan 7 2021 | ||||
d20839711fb3 | frerot | unnecessary return type on lambda | Jan 7 2021 | ||||
8b01fcdb4d21 | frerot | removed all legacy code | Jan 7 2021 | ||||
dd37e82c03d3 | frerot | deprecated old bindings | Jan 7 2021 | ||||
5ea22488f452 | frerot | [TESTS] setting OMP_NUM_THREADS=1 in scons test | Jan 5 2021 | ||||
bd65ceb3903f | frerot | [DOC] modified doc for revised python interface | Jan 5 2021 | ||||
74509e1d1987 | frerot | added traction and displacement properties to model bindings | Jan 5 2021 | ||||
7be77d61e712 | frerot | adding [] operator to Model class | Jan 5 2021 | ||||
9054b97f8b37 | frerot | modified dumpers for new interface | Jan 5 2021 | ||||
af6a620b3dce | frerot | const correctness of fftengine | Jan 4 2021 | ||||
2316c9ebcdd7 | frerot | copyright year 2021 | Jan 1 2021 | ||||
8b57ac4133c5 | frerot | added number of dumpers in model << output | Dec 31 2020 | ||||
cbd238489088 | frerot | updated tests for new interface | Dec 31 2020 | ||||
65506d9f82cf | frerot | bump version to 2.2.0 | Dec 31 2020 | ||||
7a837ca5513a | frerot | updated examples to use more pythonic interface | Dec 31 2020 | ||||
49155381f7a4 | frerot | added __call__ to IntegralOperator bindings | Dec 31 2020 | ||||
07bf72fea9cc | frerot | calling setSizes in SurfaceGenerator constructor | Dec 31 2020 | ||||
560001b7e019 | frerot | adding a constructor with global shape to surface generators | Dec 31 2020 | ||||
9d2cf7093171 | frerot | more pythonic bindings of surface generators, solvers and flood fill | Dec 31 2020 | ||||
dd69668f7622 | frerot | added bounding box computation for clusters | Dec 31 2020 | ||||
cfbbd07ff0cf | frerot | more pythonic interface for accessing integral operators | Dec 30 2020 | ||||
1597124d7ae9 | frerot | [TEST] added an mpi version of plasticity patch test | Dec 15 2020 | ||||
44fd0470bd21 | frerot | renamed USE_CUDA macro to TAMAAS_USE_CUDA | Dec 14 2020 | ||||
5b9baa398081 | frerot | [BUILD] incrementally checking for requested fftw components | Dec 14 2020 | ||||
077b1feba4c2 | frerot | [DOC] added figure for data distribution | Dec 11 2020 | ||||
92343fd27ef3 | frerot | added documentation on MPI | Dec 10 2020 | ||||
0670ef204b92 | frerot | not writing gtest xml with mpirun | Dec 10 2020 | ||||
460a2d811c4e | frerot | only warning once about mpi | Dec 10 2020 | ||||
d3adb8781f6e | frerot | adapted plasticty example for mpi | Dec 10 2020 | ||||
cbef215a579d | frerot | properly setting size of underlying array in grid views | Dec 10 2020 | ||||
6497fb26e47c | frerot | skipping headless test when not on root process | Dec 10 2020 | ||||
73a8b44d38ce | frerot | updated stress example to run with mpi | Dec 9 2020 | ||||
c6cda5e747be | frerot | added newline for debug messages | Dec 9 2020 | ||||
10c9ddd1e0e0 | frerot | fixed a bug in the computation of grid strides | Dec 9 2020 | ||||
50989776262e | frerot | added back the old pkr mpi test | Dec 9 2020 | ||||
02240a9f1952 | frerot | correcting fundamental mode only on root rank | Dec 8 2020 | ||||
695f2e0111b0 | frerot | protecting mkdir in @directory_dump | Dec 8 2020 | ||||
74402ed7185c | frerot | added readonly properties to python model bindings | Dec 8 2020 | ||||
fe04638c6ab7 | frerot | adding method for global discretization in model | Dec 8 2020 | ||||
eed5bd5407de | frerot | converting only dumped fields in hdf5toVTK | Dec 8 2020 | ||||
12b7e837ead0 | frerot | not running mpi h5dumper test when hdf5 has no mpi support | Dec 8 2020 | ||||
6f1bb5d3d5ce | frerot | added helper function to convert hdf5 model dump to VTK | Dec 8 2020 | ||||
83b12befa682 | frerot | uniform debug messages with TAMAAS_DEBUG_MSG macro | Dec 8 2020 | ||||
f739905b88d2 | frerot | raising exception if scipy solvers are used with MPI | Dec 8 2020 | ||||
09b1019f9242 | frerot | use uvw.RectilinearGrid instead of parallel variant | Dec 8 2020 | ||||
09634dfd5d9d | frerot | adding has_mpi to TamaasInfo class | Dec 7 2020 | ||||
d9c3d9f292da | frerot | added tolerance on components tests | Dec 5 2020 | ||||
1af5c7f89584 | frerot | raising when NumpyDumper is called in parallel | Dec 4 2020 | ||||
a9371b17cdd2 | frerot | prepared implementation of parallel dumpers | Dec 4 2020 | ||||
b4ec536528a2 | frerot | added type traits to python interface | Dec 4 2020 | ||||
cce181f1da1f | frerot | added convenience size/rank to mpi bindings | Dec 2 2020 | ||||
90e419eb7a0a | frerot | changed tm.to_voigt uses to tm.compute.to_voigt | Dec 1 2020 | ||||
f9fadc483c40 | frerot | moved mpi function bindings to their own submodule | Dec 1 2020 | ||||
efd5776aa2c0 | frerot | fixing fftwmpi tests | Dec 1 2020 | ||||
4022e3acd5e6 | frerot | testing parallel pkr with hertz instead of sequential pkr | Dec 1 2020 | ||||
24b0fa8bbc51 | frerot | making an fftengine on the fly in stats functions | Dec 1 2020 | ||||
3503d740b538 | frerot | added wrapping of local_{size,offset} partitioner functions | Dec 1 2020 | ||||
e290de0838e8 | frerot | added some debug log messages | Nov 27 2020 | ||||
fdea6b4ef4a4 | frerot | Merge branch 'feature/mpi_fft_engine' | Nov 25 2020 | ||||
14f13ab72ad0 | frerot | adjusting mpi tests | Nov 25 2020 | ||||
f5786e6cbeff | frerot | added experimental mpi warning | Nov 25 2020 | ||||
945eedca11ad | frerot | added backwards fft 2d tests (counterpart of mpi test) | Nov 25 2020 | ||||
54aab33e784a | frerot | added a function to compute deviatoric of sym tensor fields | Oct 23 2020 | ||||
eeeb65577eff | frerot | turn on flag TAMAAS_USE_PYTHON | Sep 3 2020 | ||||
671a3a805986 | frerot | adjusting tolerance of test FFT1D2Comp | Sep 3 2020 | ||||
a18819dd25e3 | frerot | rename USE_MPI to TAMAAS_USE_MPI | Sep 1 2020 | ||||
ddb30ba41df9 | frerot | Merge branch 'master' into feature/mpi_fft_engine | Sep 1 2020 | ||||
0f3eef3f390e | frerot | removed useless operator= for ToleranceManager | Aug 31 2020 | ||||
5e6c40b035b2 | frerot | silenced warnings about deprecated copy ctors | Aug 31 2020 | ||||
5471cb70c676 | frerot | linking with libpython${version} to test_gtest_all | Aug 31 2020 |
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