Diffusion tamaas (features/netcdf-mpi) History

netcdf-mpi483b0d63989bf9509676270…

Jul 20 2021

[ci] printing clang-format diff to stdout
38f079f2e407
·frerot on Jul 20 2021, 00:25.
[ci] corrected bash syntax error
21382de51f3b
·frerot on Jul 20 2021, 00:18.
[ci] adding clang-format patch as artifact
b605084b4308
·frerot on Jul 20 2021, 00:09.

Jul 14 2021

more linting mods
4d76b041198e
·frerot on Jul 14 2021, 23:51.

Jul 12 2021

applying linting modifications
d92dd3888b13
·frerot on Jul 12 2021, 16:33.

Jun 10 2021

cleaned up license headers
1fc7644bad52
·frerot on Jun 10 2021, 22:30.

Jun 9 2021

added docstrings to some python function bindings
1de4d8b950ca
·frerot on Jun 9 2021, 16:35.

Jun 1 2021

correctly computing contact area in mpi context
cdc6ac1a08f9
·frerot on Jun 1 2021, 00:04.

May 31 2021

re-established sort order for eigenvalues
c36392a99574
·frerot on May 31 2021, 16:54.

May 29 2021

removing remnants of fftw's interface
fd9661c88813
·frerot on May 29 2021, 20:36.
added experimental cuda warning
7faf5c9d3692
·frerot on May 29 2021, 20:13.

May 28 2021

not linking against fftw if cuda is used
0ae1a96db417
·frerot on May 28 2021, 22:59.
reorganized fftw files in their own directory
d1dc26e4556a
·frerot on May 28 2021, 21:31.
Merge branch 'master' into features/cuda
fde6a532b8a1
·frerot on May 28 2021, 19:40.
always compiling mpi_interface.cpp
2baa944ac358
·frerot on May 28 2021, 19:40.
making the whole library compile with cuda
0257e3cb2f4e
·frerot on May 28 2021, 17:15.
fft engine for cuda
6b9140c22c9b
·frerot on May 28 2021, 05:39.

May 27 2021

more progress to have tamaas compile with nvcc
cb90433efaab
·frerot on May 27 2021, 22:23.

May 19 2021

more compatibility with cuda
0f189d10cd98
·frerot on May 19 2021, 21:54.
manually sorting eigenvalues instead of thrust::sort
31f5a4526a6e
·frerot on May 19 2021, 20:14.
using cuda-compatible exchange function instead of std::exchange
c159445c87fb
·frerot on May 19 2021, 20:14.
avoiding pointless comparison with 0 warning
227f8de0a319
·frerot on May 19 2021, 20:13.
__device__, __host__, CUDA_LAMBDA annotations
b2df7a0d87de
·frerot on May 19 2021, 20:12.

May 13 2021

displaying log level + debug logs in tamaas.cpp
751788025682
·frerot on May 13 2021, 21:50.

Mar 20 2021

[doc] silencing warnings when generating documentation
6c56b69be4a2
·frerot on Mar 20 2021, 00:57.

Mar 17 2021

separating TAMAAS_BACKEND to reflect the build parameters
b2f9e4544b61
·frerot on Mar 17 2021, 22:23.

Jan 7 2021

stopped using leading and trailing __ in header guards
2b523bbf68a7
·frerot on Jan 7 2021, 02:54.
Merge branch 'deprecated_bindings'
10e17acc88ce
·frerot on Jan 7 2021, 01:58.
removed all legacy code
8b01fcdb4d21
·frerot on Jan 7 2021, 01:32.

Jan 4 2021

const correctness of fftengine
af6a620b3dce
·frerot on Jan 4 2021, 22:47.

Jan 1 2021

Dec 14 2020

renamed USE_CUDA macro to TAMAAS_USE_CUDA
44fd0470bd21
·frerot on Dec 14 2020, 18:05.

Dec 10 2020

only warning once about mpi
460a2d811c4e
·frerot on Dec 10 2020, 03:46.
properly setting size of underlying array in grid views
cbef215a579d
·frerot on Dec 10 2020, 03:24.

Dec 9 2020

added newline for debug messages
c6cda5e747be
·frerot on Dec 9 2020, 22:57.
fixed a bug in the computation of grid strides
10c9ddd1e0e0
·frerot on Dec 9 2020, 22:56.

Dec 8 2020

correcting fundamental mode only on root rank
02240a9f1952
·frerot on Dec 8 2020, 22:20.
uniform debug messages with TAMAAS_DEBUG_MSG macro
83b12befa682
·frerot on Dec 8 2020, 17:16.

Dec 1 2020

making an fftengine on the fly in stats functions
24b0fa8bbc51
·frerot on Dec 1 2020, 21:14.

Nov 25 2020

Merge branch 'feature/mpi_fft_engine'
fdea6b4ef4a4
·frerot on Nov 25 2020, 21:35.
added experimental mpi warning
f5786e6cbeff
·frerot on Nov 25 2020, 21:29.

Oct 23 2020

added a function to compute deviatoric of sym tensor fields
54aab33e784a
·frerot on Oct 23 2020, 21:58.

Sep 1 2020

rename USE_MPI to TAMAAS_USE_MPI
a18819dd25e3
·frerot on Sep 1 2020, 23:26.
Merge branch 'master' into feature/mpi_fft_engine
ddb30ba41df9
·frerot on Sep 1 2020, 23:22.

Aug 31 2020

silenced warnings about deprecated copy ctors
5e6c40b035b2
·frerot on Aug 31 2020, 19:00.

Aug 13 2020

added helper method to compute (corrected) contact areas
c9eb34ff4665
·frerot on Aug 13 2020, 17:15.

Aug 8 2020

prefer this email
3838c1d4ac9d
·frerot on Aug 8 2020, 01:04.

Aug 6 2020

updating emails and refreshing pipe_tools
bb36f61af70a
·frerot on Aug 6 2020, 23:54.
reducing float test tolerance to 4ε
9d631430e38f
·frerot on Aug 6 2020, 01:22.

Aug 3 2020

Merge branch 'feature/dfsane'
0aff1cd1a985
·frerot on Aug 3 2020, 21:28.

Aug 2 2020

allowing compilation without OpenMP
d6d8134e1bba
·frerot on Aug 2 2020, 02:07.

Aug 1 2020

tentative implementation of DFSANESolver
cf36e15d08a3
·frerot on Aug 1 2020, 01:42.

Jul 17 2020

using global datasize/nbpoints functions when needed
e51c229537c2
·frerot on Jul 17 2020, 21:04.

Jul 15 2020

proper singleton for mpi::comm::world ensures working seq_guard
a9660ef02eed
·frerot on Jul 15 2020, 21:56.

Jul 12 2020

added some debug logs
b8ad8692d3ee
·frerot on Jul 12 2020, 01:30.

Jul 11 2020

computeFrequencies now takes local sizes as argument
2696ba6deb02
·frerot on Jul 11 2020, 23:01.
implemented + tested mpi version of FFTEngine::computeFrequencies
0672d04558bb
·frerot on Jul 11 2020, 17:34.

Jul 10 2020

Merge branch 'master' into feature/mpi_fft_engine
0defcff64961
·frerot on Jul 10 2020, 23:59.
redirecting iostreams to python streams for solve functions
6124726e1b08
·frerot on Jul 10 2020, 23:27.
added polymorphism to FFTEngines
0752a2fdb670
·frerot on Jul 10 2020, 00:06.

Jul 9 2020

split fftw mpi interface
ebfd54d08a16
·frerot on Jul 9 2020, 16:58.

Jul 6 2020

tentative implementation of surface generation with mpi
5b293e6eba23
·frerot on Jul 6 2020, 04:17.

Jul 4 2020

added mpi reductions to loops
3f746e302ec4
·frerot on Jul 4 2020, 15:44.

Jul 2 2020

logging info on root proc
dfa9798ca373
·frerot on Jul 2 2020, 17:34.
added FFTMPIEngine
8facf8e0cda6
·frerot on Jul 2 2020, 16:59.

Jul 1 2020

no need for type traits to print enum labels
962ac4122e60
·frerot on Jul 1 2020, 15:14.
added reserve method to array and grid base
ddca5e722d54
·frerot on Jul 1 2020, 05:23.
allowing subclasses of FFTEngine
cb641f5bb816
·frerot on Jul 1 2020, 05:20.
safeguarding initialization functions
ddd01b4279a8
·frerot on Jul 1 2020, 05:20.

Jun 28 2020

proper initializing of mpi and fftw with threads
1a1af8988bd3
·frerot on Jun 28 2020, 17:32.
making fftengine internals more accessible for subclassing
37620cc9f8b9
·frerot on Jun 28 2020, 15:09.
ensuring initialize and finalized get called
04fa2ac30483
·frerot on Jun 28 2020, 03:09.

Jun 25 2020

getting rid of BOOST_PP_STRINGIZE
f1073dba0c14
·frerot on Jun 25 2020, 17:43.
removed FFTPlanManager and consorts
a66ead09e464
·frerot on Jun 25 2020, 03:06.
simplified alloc of in/out pointers in FFTEngine
aa1de33be858
·frerot on Jun 25 2020, 02:38.
making FFTEngine work with fftw flags >= FFTW_MEASURE
5b7d5e177fcd
·frerot on Jun 25 2020, 02:24.
removed remaining calls to FFTPlanManager
8f3b1410b161
·frerot on Jun 25 2020, 00:54.

Jun 24 2020

cleaning up the use of preprocessor macros
3cc1d8a160a7
·frerot on Jun 24 2020, 05:07.
removed unecessary LONG_PRECISION macro guard for fftw interface
548c812ae786
·frerot on Jun 24 2020, 04:28.
moved implementation of legacy surface statistics to separate cpp
75a2de973a73
·frerot on Jun 24 2020, 04:16.
using holder type for fftw plans in FFTEngine
d66116666bb9
·frerot on Jun 24 2020, 01:18.
fixing long double fftw interface
b4bacea3061c
·frerot on Jun 24 2020, 01:16.
converted statistics to FFTEngine
6bd8cd25056a
·frerot on Jun 24 2020, 00:18.

Jun 23 2020

adding computeFrequencies to FFTEngine
be7bc1258547
·frerot on Jun 23 2020, 21:13.

Jun 22 2020

added FFTEngine class
f8e1e9c7a919
·frerot on Jun 22 2020, 20:54.

Jun 2 2020

simplify git diff stored in binary
64ad818b2ad5
·frerot on Jun 2 2020, 20:39.

May 5 2020

updating copyright years
ae0010d56921
·frerot on May 5 2020, 18:13.

Oct 4 2019

added -pedantic to compile flags (except pybind11)
903a03968664
·frerot on Oct 4 2019, 16:04.
[lint] performance suggestions from clang-tidy
374ff2b778cf
·frerot on Oct 4 2019, 10:07.

Sep 24 2019

[lint] removed dead code in surface stats
c12ade2646ab
·frerot on Sep 24 2019, 18:58.
linting on modernize-* rules in clang-tidy
35997c97068f
·frerot on Sep 24 2019, 18:48.
adding move operations on iterators
1372165db991
·frerot on Sep 24 2019, 18:47.

Aug 13 2019

keeping openmp when tbb enabled because of tamaas::initialize
db0e2e12a4a3
·frerot on Aug 13 2019, 17:58.
added option to compile with TBB thrust backend
cd016f434e5f
·frerot on Aug 13 2019, 17:22.

Jul 29 2019

fixed issues with long double warnings
32da06a0d51a
·frerot on Jul 29 2019, 18:09.

Jul 25 2019

necessary changes to make tests pass in long double
3842898f7a1d
·frerot on Jul 25 2019, 17:28.
typed DEFAULT_ALLOCATOR macro
90e9cdc70ad2
·frerot on Jul 25 2019, 14:10.

Jul 24 2019

added support for long integers and long doubles
17e2e4873937
·frerot on Jul 24 2019, 19:58.
adapted code to allow a change in integer type
10037a017efb
·frerot on Jul 24 2019, 14:39.

Jul 10 2019

moved eigenvalues computation to separate submodule + vonMises
05f6175eafb9
·frerot on Jul 10 2019, 12:21.

tamaas/src/corefeatures/netcdf-mpi483b0d63989bf9509676270…

Jul 20 2021

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tamaas/src/core
features/netcdf-mpi483b0d63989bf9509676270…