Diffusion tamaas (features/netcdf-mpi) History

netcdf-mpi9578f56e3c5105f24bfd194…

Mar 20 2021

[doc] silencing warnings when generating documentation
6c56b69be4a2
·frerot on Mar 20 2021, 00:57.

Mar 15 2021

using SCons File and Dir instead of os.path functions
8ea64976e79c
·frerot on Mar 15 2021, 01:19.

Mar 14 2021

avoid using main_env in SConscripts
70977949d1a6
·frerot on Mar 14 2021, 04:34.

Mar 8 2021

using absolute path for env variables with `scons test`
659ebdd10165
·frerot on Mar 8 2021, 17:47.

Mar 3 2021

[ci] added gitlab ci file
0c1bc986d3bc
·frerot on Mar 3 2021, 23:02.
[tests] not running mpi googletest if not compiled with mpi
881abfa51439
·frerot on Mar 3 2021, 21:42.

Feb 16 2021

using tmp_path fixture for dumper tests
1b416aafdfde
·frerot on Feb 16 2021, 21:22.

Jan 7 2021

Merge branch 'deprecated_bindings'
10e17acc88ce
·frerot on Jan 7 2021, 01:58.
removed all legacy code
8b01fcdb4d21
·frerot on Jan 7 2021, 01:32.
deprecated old bindings
dd37e82c03d3
·frerot on Jan 7 2021, 01:28.

Jan 5 2021

[TESTS] setting OMP_NUM_THREADS=1 in scons test
5ea22488f452
·frerot on Jan 5 2021, 21:37.
added traction and displacement properties to model bindings
74509e1d1987
·frerot on Jan 5 2021, 18:13.

Jan 1 2021

Dec 31 2020

updated tests for new interface
cbd238489088
·frerot on Dec 31 2020, 18:10.

Dec 15 2020

[TEST] added an mpi version of plasticity patch test
1597124d7ae9
·frerot on Dec 15 2020, 20:53.

Dec 14 2020

renamed USE_CUDA macro to TAMAAS_USE_CUDA
44fd0470bd21
·frerot on Dec 14 2020, 18:05.

Dec 10 2020

not writing gtest xml with mpirun
0670ef204b92
·frerot on Dec 10 2020, 17:11.
properly setting size of underlying array in grid views
cbef215a579d
·frerot on Dec 10 2020, 03:24.
skipping headless test when not on root process
6497fb26e47c
·frerot on Dec 10 2020, 00:35.

Dec 9 2020

fixed a bug in the computation of grid strides
10c9ddd1e0e0
·frerot on Dec 9 2020, 22:56.
added back the old pkr mpi test
50989776262e
·frerot on Dec 9 2020, 17:17.

Dec 8 2020

correcting fundamental mode only on root rank
02240a9f1952
·frerot on Dec 8 2020, 22:20.
not running mpi h5dumper test when hdf5 has no mpi support
12b7e837ead0
·frerot on Dec 8 2020, 19:45.

Dec 7 2020

adding has_mpi to TamaasInfo class
09634dfd5d9d
·frerot on Dec 7 2020, 18:06.

Dec 5 2020

added tolerance on components tests
d9c3d9f292da
·frerot on Dec 5 2020, 00:14.

Dec 4 2020

prepared implementation of parallel dumpers
a9371b17cdd2
·frerot on Dec 4 2020, 22:23.

Dec 1 2020

changed tm.to_voigt uses to tm.compute.to_voigt
90e419eb7a0a
·frerot on Dec 1 2020, 22:35.
moved mpi function bindings to their own submodule
f9fadc483c40
·frerot on Dec 1 2020, 21:44.
fixing fftwmpi tests
efd5776aa2c0
·frerot on Dec 1 2020, 21:23.
testing parallel pkr with hertz instead of sequential pkr
4022e3acd5e6
·frerot on Dec 1 2020, 21:23.

Nov 25 2020

adjusting mpi tests
14f13ab72ad0
·frerot on Nov 25 2020, 21:31.
added backwards fft 2d tests (counterpart of mpi test)
945eedca11ad
·frerot on Nov 25 2020, 21:28.

Sep 3 2020

turn on flag TAMAAS_USE_PYTHON
eeeb65577eff
·frerot on Sep 3 2020, 23:28.
adjusting tolerance of test FFT1D2Comp
671a3a805986
·frerot on Sep 3 2020, 23:15.

Sep 1 2020

Merge branch 'master' into feature/mpi_fft_engine
ddb30ba41df9
·frerot on Sep 1 2020, 23:22.

Aug 31 2020

linking with libpython${version} to test_gtest_all
5471cb70c676
·frerot on Aug 31 2020, 18:22.

Aug 13 2020

added helper method to compute (corrected) contact areas
c9eb34ff4665
·frerot on Aug 13 2020, 17:15.

Aug 7 2020

fixing errors for python 2
69c13358055d
·frerot on Aug 7 2020, 22:56.
making sure libTamaas is linked first
87df0438ac11
·frerot on Aug 7 2020, 20:21.

Aug 6 2020

adding a backwards transform test
32f729beef69
·frerot on Aug 6 2020, 01:26.
reducing float test tolerance to 4ε
9d631430e38f
·frerot on Aug 6 2020, 01:22.

Aug 4 2020

netcdf dumper now writes frames to a single file
357aabe906d0
·frerot on Aug 4 2020, 23:02.

Aug 3 2020

Merge branch 'feature/dfsane'
0aff1cd1a985
·frerot on Aug 3 2020, 21:28.
testing all non-linear solvers in plasticity patch test
65b794bf9f7b
·frerot on Aug 3 2020, 21:27.
tested implementation of C++ DFSANESolver
510fc333cb53
·frerot on Aug 3 2020, 19:41.

Aug 2 2020

allowing compilation without OpenMP
d6d8134e1bba
·frerot on Aug 2 2020, 02:07.

Jul 31 2020

prettier compilation outputs in non-verbose mode
d38b418143c0
·frerot on Jul 31 2020, 22:17.

Jul 29 2020

renamed packaging_setup option to build_static_lib
cbe79569b127
·frerot on Jul 29 2020, 16:29.

Jul 22 2020

relaxing threshold in patch plasticity test
ba57121986ad
·frerot on Jul 22 2020, 14:03.
allow pickles in numpy dumper test (default changed in 1.16.1)
10e89fb76a8c
·frerot on Jul 22 2020, 14:02.

Jul 17 2020

using global datasize/nbpoints functions when needed
e51c229537c2
·frerot on Jul 17 2020, 21:04.
testing PolonskyKeerRey in MPI
41cf38d51bcf
·frerot on Jul 17 2020, 19:24.

Jul 16 2020

addind test for mpi model creation
a7af53db8efa
·frerot on Jul 16 2020, 04:57.
allowing runs of several mpi routine tests
4921b6ec6a4c
·frerot on Jul 16 2020, 04:55.

Jul 15 2020

proper singleton for mpi::comm::world ensures working seq_guard
a9660ef02eed
·frerot on Jul 15 2020, 21:56.

Jul 12 2020

upgrading dockerfile and jenkinsfile for mpi tests
fa4fef35f40f
·frerot on Jul 12 2020, 17:32.
protected gtests that need to be run in sequential with guard
0e475acfc2fe
·frerot on Jul 12 2020, 14:13.
added mpi::sequential_guard
254daee554df
·frerot on Jul 12 2020, 14:12.
proper testing of mpi-enabled routines in python
cb2acaf61c4c
·frerot on Jul 12 2020, 03:59.
removed explicit refs to MPI_COMM_WORLD
6819d831b8a4
·frerot on Jul 12 2020, 01:29.

Jul 11 2020

computeFrequencies now takes local sizes as argument
2696ba6deb02
·frerot on Jul 11 2020, 23:01.
running googletests with mpirun from pytest
fd5aedbcfb11
·frerot on Jul 11 2020, 20:33.
passing test for FFTMPI on multicomponents grid
621f49e8820d
·frerot on Jul 11 2020, 20:08.
implemented + tested mpi version of FFTEngine::computeFrequencies
0672d04558bb
·frerot on Jul 11 2020, 17:34.
testing FFTWMPIEngine
77f5b675fc9d
·frerot on Jul 11 2020, 05:17.

Jul 10 2020

Merge branch 'master' into feature/mpi_fft_engine
0defcff64961
·frerot on Jul 10 2020, 23:59.
added polymorphism to FFTEngines
0752a2fdb670
·frerot on Jul 10 2020, 00:06.

Jul 9 2020

adding tests for partitioner
9775a947c07f
·frerot on Jul 9 2020, 20:34.
ignoring DeprecationWarning with pytest.ini config file
1dcf00b3cf42
·frerot on Jul 9 2020, 19:40.
removed stray tm.finalize's in tests
212e9544374c
·frerot on Jul 9 2020, 17:49.

Jul 4 2020

added mpi reductions to loops
3f746e302ec4
·frerot on Jul 4 2020, 15:44.

Jul 3 2020

setting proper rpath for tests
f16ec5b85e49
·frerot on Jul 3 2020, 04:53.

Jun 25 2020

fixing CPPDEFINES
2581cf15be7f
·frerot on Jun 25 2020, 16:18.
removed FFTPlanManager and consorts
a66ead09e464
·frerot on Jun 25 2020, 03:06.
making sure libTamaas from build is loaded when running tests
531937f6e06f
·frerot on Jun 25 2020, 02:43.
making FFTEngine work with fftw flags >= FFTW_MEASURE
5b7d5e177fcd
·frerot on Jun 25 2020, 02:24.
removed remaining calls to FFTPlanManager
8f3b1410b161
·frerot on Jun 25 2020, 00:54.

Jun 24 2020

Merge branch 'master' into feature/fft_engine
3796abfaa1cd
·frerot on Jun 24 2020, 22:18.
added header report for pytest
22578f2b019d
·frerot on Jun 24 2020, 22:13.
reducing system size of test_epic
9919a84cfd1d
·frerot on Jun 24 2020, 19:18.
removed legacy surface generator in test_autocorrelation
d5baa0511b25
·frerot on Jun 24 2020, 05:34.
compiling c++ tests needing pybind11 separately
7af541847c01
·frerot on Jun 24 2020, 05:30.
cleaning up the use of preprocessor macros
3cc1d8a160a7
·frerot on Jun 24 2020, 05:07.

Jun 23 2020

adding computeFrequencies to FFTEngine
be7bc1258547
·frerot on Jun 23 2020, 21:13.

Jun 22 2020

added FFTEngine class
f8e1e9c7a919
·frerot on Jun 22 2020, 20:54.
ignoring deprecation warnings in test_dumper
7d5bdcdc47bb
·frerot on Jun 22 2020, 20:53.

May 26 2020

testing dumped array values instead of shape
c265f81a2c96
·frerot on May 26 2020, 22:19.

May 19 2020

better normalization in patch plasticity test
a5c45c2f1235
·frerot on May 19 2020, 17:37.

May 6 2020

added a test of the EPIC solver [see 09e51e6]
2c694d3bf38f
·frerot on May 6 2020, 00:08.

May 5 2020

updating copyright years
ae0010d56921
·frerot on May 5 2020, 18:13.

Apr 27 2020

removed print statement
8368c5ece053
·frerot on Apr 27 2020, 20:27.
cleaned up code for pybind11 detection and module building
0f8bb69278d8
·frerot on Apr 27 2020, 18:00.

Apr 23 2020

allowed storing of provided CXXFLAGS into scons setup file
824e0b9504de
·frerot on Apr 23 2020, 17:18.

Apr 22 2020

cleaner definition of fallback scons commands
a1aa792f5ac8
·frerot on Apr 22 2020, 23:58.

Apr 21 2020

update documentation to reflect changes to install and test targets
75aa4cd59303
·frerot on Apr 21 2020, 01:11.
added target alias "test" for scons
af1a46404bce
·frerot on Apr 21 2020, 00:57.

Apr 20 2020

automatically setting prefix/lib in rpaths
f6f9d433c7ec
·frerot on Apr 20 2020, 21:29.
added -Wextra and fixed some warnings
43f7d9ba9056
·frerot on Apr 20 2020, 21:24.

Apr 17 2020

corrected code boundary definitions of legacy bem
28b1e8b7df63
·frerot on Apr 17 2020, 22:23.
refactored elastic test for kato
0d95bde86776
·frerot on Apr 17 2020, 01:07.

tamaas/testsfeatures/netcdf-mpi9578f56e3c5105f24bfd194…

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tamaas/tests
features/netcdf-mpi9578f56e3c5105f24bfd194…